Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037130
CDS Infomation

pacid=37461016 polypeptide=PGSC0003DMP400025217 locus=PGSC0003DMG400014314 ID=PGSC0003DMT400037130.v4.03 annot-version=v4.03
Sequence

ATGGAGGGTTGTGGGGATTTTGTGCAATGCCTTTTACCTGATATGTCTATAAAGATCCTA
AGTTGTTTGGATGACCCGGCTGATCTTATCCGGGTTTCTGCTGTGTCTAGTTCTTGGCGT
CAATTCGTGATTGGAAATGACTTGTGTAAGCATCTCTGTTTAAAGAGATTTCCTGAAATA
TCAAGTGTTGGAAATATGATTGAAGTTGAAAACACGGTTGTACCAGTGGTATCTCAGCCT
GAAAAGTCTACGGAGTGGTTATGTCTGGAGAGGAATCATAGAGTTTATGCATTTTTGTCA
CGCGGCCTTTCCAACTGTATCACGGAAGATTGCTTAATAGATGCAATTCATGCATCAAGC
ACTGACAACTATCCTGAGGAAAGCATTCTGAATACATTAAAACCAGGTGATCGTGTTGAG
CGCAGAGCTTCATACTGGTCAAGTGGAGGACAAAGTGATCCTACAGTCCCCGAGACACTA
ACATATAAATTAATCTCAAAGCTGTGCCTGATTTCAGAAATTCATGTACAACCTTTTCAA
GCATATTTCCAGTTTGGCTTTCCCATTTATTCAGCAACAGCTGTGAGATTCCGGGTGGGA
CATCCTAATGTTAAAATAGATGTAGAAAGTGACAACGGACTTGAATCTGTGGCTGCTCAA
GCCCGATCTTTCTGTGACAAGATTGTATGGACATATACCTCACCAGAATTTCCCTTGGTT
CAGGAGAACATCTTGCAGAAGTTTAAGCTGCCAGAACCTGTTCTTTGCATTGGCGGAATC
CTACAAGTCGAGCTCTTAGGCAGAGTTCAAAAACAACAACTGGATGGTCTATATTATATA
TGTGTATCGCACGTCCAAGTTGTTGGAAGACCACTCTTGTCAGCATTTGATGTTGAGATA
CTCGATGAATCTGGGAAGTGCAGTCTGAAGTACTGCCCAAAAGAAAGGTTGTTGTGCGAG
TCAAGTAACAAATCTACTGAAGGAGAGTCGAGTAGTCCTCCTCGGTTTCATAGGTTCAGG
GCAAGCTTAAGGGGATGGGAGCAAATGATCCTGAGTACACTACTTGGAGCCGGAGCTGGC
GTGGGTGATGATGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025217
PEP Infomation

pacid=37461016 transcript=PGSC0003DMT400037130 locus=PGSC0003DMG400014314 ID=PGSC0003DMT400037130.v4.03 annot-version=v4.03
Sequence

MEGCGDFVQCLLPDMSIKILSCLDDPADLIRVSAVSSSWRQFVIGNDLCKHLCLKRFPEI
SSVGNMIEVENTVVPVVSQPEKSTEWLCLERNHRVYAFLSRGLSNCITEDCLIDAIHASS
TDNYPEESILNTLKPGDRVERRASYWSSGGQSDPTVPETLTYKLISKLCLISEIHVQPFQ
AYFQFGFPIYSATAVRFRVGHPNVKIDVESDNGLESVAAQARSFCDKIVWTYTSPEFPLV
QENILQKFKLPEPVLCIGGILQVELLGRVQKQQLDGLYYICVSHVQVVGRPLLSAFDVEI
LDESGKCSLKYCPKERLLCESSNKSTEGESSSPPRFHRFRASLRGWEQMILSTLLGAGAG
VGDDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400037130
Transcript Infomation

pacid=37461016 locus=PGSC0003DMG400014314 ID=PGSC0003DMT400037130.v4.03 annot-version=v4.03
Sequence

ATGGAGGGTTGTGGGGATTTTGTGCAATGCCTTTTACCTGATATGTCTATAAAGATCCTA
AGTTGTTTGGATGACCCGGCTGATCTTATCCGGGTTTCTGCTGTGTCTAGTTCTTGGCGT
CAATTCGTGATTGGAAATGACTTGTGTAAGCATCTCTGTTTAAAGAGATTTCCTGAAATA
TCAAGTGTTGGAAATATGATTGAAGTTGAAAACACGGTTGTACCAGTGGTATCTCAGCCT
GAAAAGTCTACGGAGTGGTTATGTCTGGAGAGGAATCATAGAGTTTATGCATTTTTGTCA
CGCGGCCTTTCCAACTGTATCACGGAAGATTGCTTAATAGATGCAATTCATGCATCAAGC
ACTGACAACTATCCTGAGGAAAGCATTCTGAATACATTAAAACCAGGTGATCGTGTTGAG
CGCAGAGCTTCATACTGGTCAAGTGGAGGACAAAGTGATCCTACAGTCCCCGAGACACTA
ACATATAAATTAATCTCAAAGCTGTGCCTGATTTCAGAAATTCATGTACAACCTTTTCAA
GCATATTTCCAGTTTGGCTTTCCCATTTATTCAGCAACAGCTGTGAGATTCCGGGTGGGA
CATCCTAATGTTAAAATAGATGTAGAAAGTGACAACGGACTTGAATCTGTGGCTGCTCAA
GCCCGATCTTTCTGTGACAAGATTGTATGGACATATACCTCACCAGAATTTCCCTTGGTT
CAGGAGAACATCTTGCAGAAGTTTAAGCTGCCAGAACCTGTTCTTTGCATTGGCGGAATC
CTACAAGTCGAGCTCTTAGGCAGAGTTCAAAAACAACAACTGGATGGTCTATATTATATA
TGTGTATCGCACGTCCAAGTTGTTGGAAGACCACTCTTGTCAGCATTTGATGTTGAGATA
CTCGATGAATCTGGGAAGTGCAGTCTGAAGTACTGCCCAAAAGAAAGGTTGTTGTGCGAG
TCAAGTAACAAATCTACTGAAGGAGAGTCGAGTAGTCCTCCTCGGTTTCATAGGTTCAGG
GCAAGCTTAAGGGGATGGGAGCAAATGATCCTGAGTACACTACTTGGAGCCGGAGCTGGC
GTGGGTGATGATGATTAA