Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037121
CDS Infomation

pacid=37459821 polypeptide=PGSC0003DMP400025209 locus=PGSC0003DMG400014310 ID=PGSC0003DMT400037121.v4.03 annot-version=v4.03
Sequence

ATGAATATCTTTGAAACCTATTATTCAGACCCACTAATTTTAACCGAATCTTCTTCTTCT
TCTTCATCATCATCTGACGAGGAAATTATTTTAGCTTCGAATAACCCAAAAAGGCCAGCT
GGAAGGAAGAAGTTTCGAGAAACTCGACATCCGATATACAGGGGAATCAGGATGAGGAAT
TCAGGAAAATGGGTTTGTGAAGTCAGAGAACCAAATAAGAAATCAAGGATTTGGCTTGGT
ACTTTTCCTACTGCTGAAATGGCGGCTAGAGCTCATGACGTGGCAGCTTTAGCATTAAGA
GGCCGTTCTGCTTGCTTGAATTTCGCTGATTCTGCTTGGAGGTTGCCTATCCCTGCTTCC
TCCAACTCTAAAGATATTCAAAAGGCGGCCGCTGAGGCCGCCGAAATCTTCCGACCATCA
TCATCATCAGAAGAGTCGGAAGAAGTTTCTGGAGAATCTGATTACAGTACTCCTGAAACG
CCAGAAAATGCGTTTTCAGCGGCCGCCGAAATCTTCCGACCATCATCAGAAGAGTCGGAA
GAAGTTTCAGGAGAATCAGACAACAGTACTCCTGAAACGCCAGAAAATGCGTTTTTTATG
AACGAAGAAGCGCCAGAGAGTAGTTTCTTCATGGATGAGGAAGCGCTCTTTTTCATGCCA
GGATTAATTGCAAATATGGCGGAAGGACTAATGCTACCTCCACCTCAATGTGCAGAAATG
GGAGATCATTATGTGGAAGCTGATGCTTACATGACTTTATGGAATTATTCTATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025209
PEP Infomation

pacid=37459821 transcript=PGSC0003DMT400037121 locus=PGSC0003DMG400014310 ID=PGSC0003DMT400037121.v4.03 annot-version=v4.03
Sequence

MNIFETYYSDPLILTESSSSSSSSSDEEIILASNNPKRPAGRKKFRETRHPIYRGIRMRN
SGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAALALRGRSACLNFADSAWRLPIPAS
SNSKDIQKAAAEAAEIFRPSSSSEESEEVSGESDYSTPETPENAFSAAAEIFRPSSEESE
EVSGESDNSTPETPENAFFMNEEAPESSFFMDEEALFFMPGLIANMAEGLMLPPPQCAEM
GDHYVEADAYMTLWNYSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400037121
Transcript Infomation

pacid=37459821 locus=PGSC0003DMG400014310 ID=PGSC0003DMT400037121.v4.03 annot-version=v4.03
Sequence

ATGAATATCTTTGAAACCTATTATTCAGACCCACTAATTTTAACCGAATCTTCTTCTTCT
TCTTCATCATCATCTGACGAGGAAATTATTTTAGCTTCGAATAACCCAAAAAGGCCAGCT
GGAAGGAAGAAGTTTCGAGAAACTCGACATCCGATATACAGGGGAATCAGGATGAGGAAT
TCAGGAAAATGGGTTTGTGAAGTCAGAGAACCAAATAAGAAATCAAGGATTTGGCTTGGT
ACTTTTCCTACTGCTGAAATGGCGGCTAGAGCTCATGACGTGGCAGCTTTAGCATTAAGA
GGCCGTTCTGCTTGCTTGAATTTCGCTGATTCTGCTTGGAGGTTGCCTATCCCTGCTTCC
TCCAACTCTAAAGATATTCAAAAGGCGGCCGCTGAGGCCGCCGAAATCTTCCGACCATCA
TCATCATCAGAAGAGTCGGAAGAAGTTTCTGGAGAATCTGATTACAGTACTCCTGAAACG
CCAGAAAATGCGTTTTCAGCGGCCGCCGAAATCTTCCGACCATCATCAGAAGAGTCGGAA
GAAGTTTCAGGAGAATCAGACAACAGTACTCCTGAAACGCCAGAAAATGCGTTTTTTATG
AACGAAGAAGCGCCAGAGAGTAGTTTCTTCATGGATGAGGAAGCGCTCTTTTTCATGCCA
GGATTAATTGCAAATATGGCGGAAGGACTAATGCTACCTCCACCTCAATGTGCAGAAATG
GGAGATCATTATGTGGAAGCTGATGCTTACATGACTTTATGGAATTATTCTATCTAA