Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037089
CDS Infomation

pacid=37464001 polypeptide=PGSC0003DMP400025185 locus=PGSC0003DMG400014295 ID=PGSC0003DMT400037089.v4.03 annot-version=v4.03
Sequence

ATGGCGACCAAGACAACGGCACTCAGATCTTCACTAACACTTTTCGCCTCTCTTCTTCTC
TTCATCGGAGCTATTTTCTCCACCCACTTCCTATACTCTCCATTCGACAATTCCACCACA
GGATATTCTCCACGAAAGACAATATTAACCCCCGTAACACGCCACAATCACACTGATGCA
ACCCCAGCAGTGCCCCTGAAGAAACTGGAAATCCAACTAAATTGTACACTTGGGAATCTT
ACAAGAACTTGCCCTGCATCTTACTACCCGTTAAAGTTCACCGAACAAAATGAAGCCTCT
ACATCATCTCCTCCGCCGCCTACATGTCCAGATTACTTCCGTTGGATCTACGATGACCTA
TGGCATTGGAGAGAAACAGGAATCACCAAAGAAATGGTGATGAGAGCCAAAAGGACGGCA
GATTTTCGGTTGGTGATAGTGAATGGAAGAGCATATGTTGAAACCTATCATAAGGCATTT
CAAAGTAGAGACACATTTACATTATGGGGCATTTTACAAATGTTACGTAGGTACCCTGGT
AAACTGCCTGATTTGGACCTGATGTTCGACTGCGTTGACTGGCCAGTTCTTAAGACTGAA
TTCTATCGACACCCTAAGGCCCCTGCTCCTCCACCTCTGTTCCGATACTGTGGGAATGAT
AGTAGTTTGGATATTGTTTTTCCAGACTGGTCATTCTGGGGGTGGCCAGAGATTAATATA
AAGCCGTGGGAGACTTTGTCGAAGGACTTAAAGAAAGGGAATGAGAAGATGAAATGGACT
GACAGGGAACCATATGCATACTGGAAAGGCAATCCTGTTGTTGCTGAAACCAGGAGGGAT
CTGCTCAAGTGCAATGTTTCAGAAAAGCAGGACTGGAATGCACGCGTTTATGCTCAGGAC
TGGGGTCAAGAAGAGAAGCAAGGGTACAAGAAATCAGACTTAGCTAGTCAGTGCATCCAC
AGGTACAAGATTTATGTAGAAGGATCTGCATGGTCCGTGAGTGAAAAATATATTCTGGCC
TGTGATTCTGTTACGTTACTTATAAAACCCCAGTACTACGATTTCTACACCAGAGGTTTG
ATGCCTCTGCAACATTACTGGCCCGTAAAAGATAAAGACAAATGCCGATCAATCAAGCAC
GCTGTTGACTGGGGGAATACTCATGAACAAGAGGCACAGGCGATTGGTAAGGCAGCAAGC
GATTTCATTCAAGAACAACTCAAAATGGATTATGTGTACGACTACATGTTCCATCTCTTG
AGTGAGTATGCTAAGCTGTTGAAATACAAGCCCACTGTACCTCGAAAAGCAGTTGAGCTT
TGTTCAGAGGCAATGGCATGCCCAGCTGAAGGATTGACAAAGAAGTTCATGTTAGAATCT
ATGGTTGAAGGCCCCTCAGACGCGATACCTTGCAACATGCCACCTCCATTTGCCCCTGCA
GGTCTTCACTCTATTCTTGATAGAAAAGAAAATTCAATAAAACAAGTTGACTCATGGGAA
CAACAATATTGGAAGAACAAAAGCAAACAACAACGAAGATTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025185
PEP Infomation

pacid=37464001 transcript=PGSC0003DMT400037089 locus=PGSC0003DMG400014295 ID=PGSC0003DMT400037089.v4.03 annot-version=v4.03
Sequence

MATKTTALRSSLTLFASLLLFIGAIFSTHFLYSPFDNSTTGYSPRKTILTPVTRHNHTDA
TPAVPLKKLEIQLNCTLGNLTRTCPASYYPLKFTEQNEASTSSPPPPTCPDYFRWIYDDL
WHWRETGITKEMVMRAKRTADFRLVIVNGRAYVETYHKAFQSRDTFTLWGILQMLRRYPG
KLPDLDLMFDCVDWPVLKTEFYRHPKAPAPPPLFRYCGNDSSLDIVFPDWSFWGWPEINI
KPWETLSKDLKKGNEKMKWTDREPYAYWKGNPVVAETRRDLLKCNVSEKQDWNARVYAQD
WGQEEKQGYKKSDLASQCIHRYKIYVEGSAWSVSEKYILACDSVTLLIKPQYYDFYTRGL
MPLQHYWPVKDKDKCRSIKHAVDWGNTHEQEAQAIGKAASDFIQEQLKMDYVYDYMFHLL
SEYAKLLKYKPTVPRKAVELCSEAMACPAEGLTKKFMLESMVEGPSDAIPCNMPPPFAPA
GLHSILDRKENSIKQVDSWEQQYWKNKSKQQRRF*

Transcript Sequence

Transcript ID

PGSC0003DMT400037089
Transcript Infomation

pacid=37464001 locus=PGSC0003DMG400014295 ID=PGSC0003DMT400037089.v4.03 annot-version=v4.03
Sequence

ATGGCGACCAAGACAACGGCACTCAGATCTTCACTAACACTTTTCGCCTCTCTTCTTCTC
TTCATCGGAGCTATTTTCTCCACCCACTTCCTATACTCTCCATTCGACAATTCCACCACA
GGATATTCTCCACGAAAGACAATATTAACCCCCGTAACACGCCACAATCACACTGATGCA
ACCCCAGCAGTGCCCCTGAAGAAACTGGAAATCCAACTAAATTGTACACTTGGGAATCTT
ACAAGAACTTGCCCTGCATCTTACTACCCGTTAAAGTTCACCGAACAAAATGAAGCCTCT
ACATCATCTCCTCCGCCGCCTACATGTCCAGATTACTTCCGTTGGATCTACGATGACCTA
TGGCATTGGAGAGAAACAGGAATCACCAAAGAAATGGTGATGAGAGCCAAAAGGACGGCA
GATTTTCGGTTGGTGATAGTGAATGGAAGAGCATATGTTGAAACCTATCATAAGGCATTT
CAAAGTAGAGACACATTTACATTATGGGGCATTTTACAAATGTTACGTAGGTACCCTGGT
AAACTGCCTGATTTGGACCTGATGTTCGACTGCGTTGACTGGCCAGTTCTTAAGACTGAA
TTCTATCGACACCCTAAGGCCCCTGCTCCTCCACCTCTGTTCCGATACTGTGGGAATGAT
AGTAGTTTGGATATTGTTTTTCCAGACTGGTCATTCTGGGGGTGGCCAGAGATTAATATA
AAGCCGTGGGAGACTTTGTCGAAGGACTTAAAGAAAGGGAATGAGAAGATGAAATGGACT
GACAGGGAACCATATGCATACTGGAAAGGCAATCCTGTTGTTGCTGAAACCAGGAGGGAT
CTGCTCAAGTGCAATGTTTCAGAAAAGCAGGACTGGAATGCACGCGTTTATGCTCAGGAC
TGGGGTCAAGAAGAGAAGCAAGGGTACAAGAAATCAGACTTAGCTAGTCAGTGCATCCAC
AGGTACAAGATTTATGTAGAAGGATCTGCATGGTCCGTGAGTGAAAAATATATTCTGGCC
TGTGATTCTGTTACGTTACTTATAAAACCCCAGTACTACGATTTCTACACCAGAGGTTTG
ATGCCTCTGCAACATTACTGGCCCGTAAAAGATAAAGACAAATGCCGATCAATCAAGCAC
GCTGTTGACTGGGGGAATACTCATGAACAAGAGGCACAGGCGATTGGTAAGGCAGCAAGC
GATTTCATTCAAGAACAACTCAAAATGGATTATGTGTACGACTACATGTTCCATCTCTTG
AGTGAGTATGCTAAGCTGTTGAAATACAAGCCCACTGTACCTCGAAAAGCAGTTGAGCTT
TGTTCAGAGGCAATGGCATGCCCAGCTGAAGGATTGACAAAGAAGTTCATGTTAGAATCT
ATGGTTGAAGGCCCCTCAGACGCGATACCTTGCAACATGCCACCTCCATTTGCCCCTGCA
GGTCTTCACTCTATTCTTGATAGAAAAGAAAATTCAATAAAACAAGTTGACTCATGGGAA
CAACAATATTGGAAGAACAAAAGCAAACAACAACGAAGATTTTAG