Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037082
CDS Infomation

pacid=37460377 polypeptide=PGSC0003DMP400025182 locus=PGSC0003DMG400014292 ID=PGSC0003DMT400037082.v4.03 annot-version=v4.03
Sequence

ATGTCATCTCAGGGATCATCAAAATCAGGTTTTCTGGGAGAAGTTGGTCTTGATTTTGCA
GATTTGGTAGAGGCAACTGAAAGCTTAGTAGTATCCCTACCCCTAATGCCACTGGAGACT
GGTGCGATTTTGCATGTCGCAGTACAGAATATGCAAGGAGCTCAGGAAATCAGGCCTACT
GAAGATAGTGCTATTTCAAGGACTGATTCTCTAGATCAAAGCTTTGAAACAGAACTAGGA
AGCAATGGCCACTATGGAAACGGACATTGTACGTCTACTGAAGATGAAGAGTTGAATGAA
ACATTTCATTATTCCAAGCAAAATAGTATCCCACGGGATCCTCAACCAAAAAACAGTCTT
GTGAAACAGTTCACCTCACAAAATGCAATTAATCCCCTTGAAAGACATCTACATCAGAGA
TCATCCACAGATTGCTCGCTTGGCTCTGATTTAGATGGGAGTGTAACTGATACAACACAC
AAATCAGAGGAGGATCTTCTGAGAGACACTGCCCAAGAAACTTCAAGTAACAGTTTTGAG
TCCATGAAAAATAAGATCATAATGCTCGAGCGTCAGGCAGAATTGTCAGAAATGGAACTA
CAGACACTCAGAAAGCAAATTGTGAAAGAAACCAAAAGGGCACAGGAACAGTCAAGACAA
ATTTCTAATCTAAAAGAAGAGAGAGATGTTCTTAAAATCAAATGTGAGAAACTTAAACTG
AGATGTACAGATGAGGTGGATGCAGTAGCTTCAGATAATGCAGGAGCAGATGACAAAAAA
TCGACAGCTCTATTGGAAGAAATCAGGCATAAACTTCAGAAAGAGAAGAACTTCAATAGC
AAATTGATGCTGAAGCTGCAAAAGACGGAAGACTCAAATTCTGAATTGATTCTTACAGTA
AGAGATCTCAACAAAATGTTGGACCAGAAAGATAAGGATATTTCGTATCTTTCTGAAAAA
GTTAGGTCCAATAAGGATTTGCTAGAGGCCGCTGCGGAGAGAACCCAACTAAAGATTGGT
CAGAATGAAGATAGAAAAGCTAAGGAGCTTAAATTTGCAGATGTATCTCAATCACTGAAG
CAGACAATTGAAAAATTACAGGATGAAATAGAGGTCTACAAGAAAGACAGCAATGAAATG
AAAGCACAGATGGACCAGCTTGAAAGCCATTGCCAAGTGTTGGAAAATGAAATAGAGGTC
TACAAGAAAGACAACAATGAAATGAAAGCACAGATGGACCAGCTTGAAAGCCATTGCCAA
GTGTTGGAAGATGAAATAGAGGTCTACAAGAGAGATAACAATAAAATGAAAGCACTAATG
GACCAGCTTGAAAGCCATTGCCAAGTATTGGAAAAGGAAAATGATGATATTAATCATAAC
CTAGAGCAATGTGAGCTGCAAAACCTGAAAACACAACAAGAACACTCAGAATCTTTAGCC
TCTATAAAGCACTTTAAACTCCAGGTGGAGAGACTGGAGGAAGAAATGAAAACACAAACG
TCACAGTACTCAAAATCATTGGATACAATAAACGAACTTGAAACACATGTTTCAATGCTG
GAGAAAGAACTGGAAACACAGTCGCAGGAATTTGAAGAACATCTGGAAGCAGTCACCCAA
GCCAAAGTAAAGCAGGAGCAGAGGGCGATAAAAGCAGAGGAAGGATTGAGAAGGGCAAGG
TGGAGTAATGCTAAGGCAGCTCAGAAACTTCAGGAAGAATTAAAAAGACTATCAGATGAA
ATGACATTGAAGATTGATGAGAAAGAAGAACTGGTCAATGATGCAGTGACGGAAGCAACT
GTTCTGCGTGAGGAGAACAAAATTTTAGAGGAATTACTGCAGAAATCTGAAGAAGAACTT
AAATCAACAAAAGAACATTATGAAAGAGAAGTTCTTGAATTGAAAGCTTCATCAATGGAG
ATAGGAAGGCTAAATCTAGCAGGGTCAGAGCACTGCAAACAAATGGAGCATAGAGAAAAA
GTCGGATATGATACGGAGCAAATGGAAAAATCAACTGCTGAAATAGAGGTAGAGCAAAAA
TTGACCATGCAAAAGGAATTGGAGAGGGAACTAGCTTCAGTGAGGAGGGAAGCAGAAATG
TTTCTGGAGGAATTGATTCCCTTGAGGACTGAAGTGGATGAAAAGAAGATAATTGAAGAA
ACCTTACAATCAGAAGTAGAGAAACTACACCTACAGAATGACGAAATGAGATGCAGTACA
AATCAACTGAAGTTGGAGAATGAGAACCTGATGAAGCTGGTGCTCAAATTACAGGAACAG
GAGGATGAACCACCTGAAGAAGCAACTCAGGATAGTATTGTAGCTGGAGGAAGAAAATGT
ATGGGGAAGAACATTCATCACCAAGGAAATGGCTTTACAGAAGGAGGAATTGTGCAGAAT
GGATCAAGAAAAATTGCTAATATAACAAGAAGAGAAGTTGATTCAGGAAGAGTGGCAGAA
ACGATCAATGGTCAATCCCAAAATATACATGATCCTGAAGAATTACGAGGTCAAGTAGCT
TTATTGACTGAGAGAAACAAACACATGGAGCATGAATTGAAGGACATGCAAGAAAGATAT
TCAGAAATAAGTCTTAAATTTGCAGAGGTAGAAGGTGAAAGGCAACAACTTGTCATGGCT
TTGCGCAATTTTAAAAATGGAAAGAGGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025182
PEP Infomation

pacid=37460377 transcript=PGSC0003DMT400037082 locus=PGSC0003DMG400014292 ID=PGSC0003DMT400037082.v4.03 annot-version=v4.03
Sequence

MSSQGSSKSGFLGEVGLDFADLVEATESLVVSLPLMPLETGAILHVAVQNMQGAQEIRPT
EDSAISRTDSLDQSFETELGSNGHYGNGHCTSTEDEELNETFHYSKQNSIPRDPQPKNSL
VKQFTSQNAINPLERHLHQRSSTDCSLGSDLDGSVTDTTHKSEEDLLRDTAQETSSNSFE
SMKNKIIMLERQAELSEMELQTLRKQIVKETKRAQEQSRQISNLKEERDVLKIKCEKLKL
RCTDEVDAVASDNAGADDKKSTALLEEIRHKLQKEKNFNSKLMLKLQKTEDSNSELILTV
RDLNKMLDQKDKDISYLSEKVRSNKDLLEAAAERTQLKIGQNEDRKAKELKFADVSQSLK
QTIEKLQDEIEVYKKDSNEMKAQMDQLESHCQVLENEIEVYKKDNNEMKAQMDQLESHCQ
VLEDEIEVYKRDNNKMKALMDQLESHCQVLEKENDDINHNLEQCELQNLKTQQEHSESLA
SIKHFKLQVERLEEEMKTQTSQYSKSLDTINELETHVSMLEKELETQSQEFEEHLEAVTQ
AKVKQEQRAIKAEEGLRRARWSNAKAAQKLQEELKRLSDEMTLKIDEKEELVNDAVTEAT
VLREENKILEELLQKSEEELKSTKEHYEREVLELKASSMEIGRLNLAGSEHCKQMEHREK
VGYDTEQMEKSTAEIEVEQKLTMQKELERELASVRREAEMFLEELIPLRTEVDEKKIIEE
TLQSEVEKLHLQNDEMRCSTNQLKLENENLMKLVLKLQEQEDEPPEEATQDSIVAGGRKC
MGKNIHHQGNGFTEGGIVQNGSRKIANITRREVDSGRVAETINGQSQNIHDPEELRGQVA
LLTERNKHMEHELKDMQERYSEISLKFAEVEGERQQLVMALRNFKNGKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400037082
Transcript Infomation

pacid=37460377 locus=PGSC0003DMG400014292 ID=PGSC0003DMT400037082.v4.03 annot-version=v4.03
Sequence

ATGTCATCTCAGGGATCATCAAAATCAGGTTTTCTGGGAGAAGTTGGTCTTGATTTTGCA
GATTTGGTAGAGGCAACTGAAAGCTTAGTAGTATCCCTACCCCTAATGCCACTGGAGACT
GGTGCGATTTTGCATGTCGCAGTACAGAATATGCAAGGAGCTCAGGAAATCAGGCCTACT
GAAGATAGTGCTATTTCAAGGACTGATTCTCTAGATCAAAGCTTTGAAACAGAACTAGGA
AGCAATGGCCACTATGGAAACGGACATTGTACGTCTACTGAAGATGAAGAGTTGAATGAA
ACATTTCATTATTCCAAGCAAAATAGTATCCCACGGGATCCTCAACCAAAAAACAGTCTT
GTGAAACAGTTCACCTCACAAAATGCAATTAATCCCCTTGAAAGACATCTACATCAGAGA
TCATCCACAGATTGCTCGCTTGGCTCTGATTTAGATGGGAGTGTAACTGATACAACACAC
AAATCAGAGGAGGATCTTCTGAGAGACACTGCCCAAGAAACTTCAAGTAACAGTTTTGAG
TCCATGAAAAATAAGATCATAATGCTCGAGCGTCAGGCAGAATTGTCAGAAATGGAACTA
CAGACACTCAGAAAGCAAATTGTGAAAGAAACCAAAAGGGCACAGGAACAGTCAAGACAA
ATTTCTAATCTAAAAGAAGAGAGAGATGTTCTTAAAATCAAATGTGAGAAACTTAAACTG
AGATGTACAGATGAGGTGGATGCAGTAGCTTCAGATAATGCAGGAGCAGATGACAAAAAA
TCGACAGCTCTATTGGAAGAAATCAGGCATAAACTTCAGAAAGAGAAGAACTTCAATAGC
AAATTGATGCTGAAGCTGCAAAAGACGGAAGACTCAAATTCTGAATTGATTCTTACAGTA
AGAGATCTCAACAAAATGTTGGACCAGAAAGATAAGGATATTTCGTATCTTTCTGAAAAA
GTTAGGTCCAATAAGGATTTGCTAGAGGCCGCTGCGGAGAGAACCCAACTAAAGATTGGT
CAGAATGAAGATAGAAAAGCTAAGGAGCTTAAATTTGCAGATGTATCTCAATCACTGAAG
CAGACAATTGAAAAATTACAGGATGAAATAGAGGTCTACAAGAAAGACAGCAATGAAATG
AAAGCACAGATGGACCAGCTTGAAAGCCATTGCCAAGTGTTGGAAAATGAAATAGAGGTC
TACAAGAAAGACAACAATGAAATGAAAGCACAGATGGACCAGCTTGAAAGCCATTGCCAA
GTGTTGGAAGATGAAATAGAGGTCTACAAGAGAGATAACAATAAAATGAAAGCACTAATG
GACCAGCTTGAAAGCCATTGCCAAGTATTGGAAAAGGAAAATGATGATATTAATCATAAC
CTAGAGCAATGTGAGCTGCAAAACCTGAAAACACAACAAGAACACTCAGAATCTTTAGCC
TCTATAAAGCACTTTAAACTCCAGGTGGAGAGACTGGAGGAAGAAATGAAAACACAAACG
TCACAGTACTCAAAATCATTGGATACAATAAACGAACTTGAAACACATGTTTCAATGCTG
GAGAAAGAACTGGAAACACAGTCGCAGGAATTTGAAGAACATCTGGAAGCAGTCACCCAA
GCCAAAGTAAAGCAGGAGCAGAGGGCGATAAAAGCAGAGGAAGGATTGAGAAGGGCAAGG
TGGAGTAATGCTAAGGCAGCTCAGAAACTTCAGGAAGAATTAAAAAGACTATCAGATGAA
ATGACATTGAAGATTGATGAGAAAGAAGAACTGGTCAATGATGCAGTGACGGAAGCAACT
GTTCTGCGTGAGGAGAACAAAATTTTAGAGGAATTACTGCAGAAATCTGAAGAAGAACTT
AAATCAACAAAAGAACATTATGAAAGAGAAGTTCTTGAATTGAAAGCTTCATCAATGGAG
ATAGGAAGGCTAAATCTAGCAGGGTCAGAGCACTGCAAACAAATGGAGCATAGAGAAAAA
GTCGGATATGATACGGAGCAAATGGAAAAATCAACTGCTGAAATAGAGGTAGAGCAAAAA
TTGACCATGCAAAAGGAATTGGAGAGGGAACTAGCTTCAGTGAGGAGGGAAGCAGAAATG
TTTCTGGAGGAATTGATTCCCTTGAGGACTGAAGTGGATGAAAAGAAGATAATTGAAGAA
ACCTTACAATCAGAAGTAGAGAAACTACACCTACAGAATGACGAAATGAGATGCAGTACA
AATCAACTGAAGTTGGAGAATGAGAACCTGATGAAGCTGGTGCTCAAATTACAGGAACAG
GAGGATGAACCACCTGAAGAAGCAACTCAGGATAGTATTGTAGCTGGAGGAAGAAAATGT
ATGGGGAAGAACATTCATCACCAAGGAAATGGCTTTACAGAAGGAGGAATTGTGCAGAAT
GGATCAAGAAAAATTGCTAATATAACAAGAAGAGAAGTTGATTCAGGAAGAGTGGCAGAA
ACGATCAATGGTCAATCCCAAAATATACATGATCCTGAAGAATTACGAGGTCAAGTAGCT
TTATTGACTGAGAGAAACAAACACATGGAGCATGAATTGAAGGACATGCAAGAAAGATAT
TCAGAAATAAGTCTTAAATTTGCAGAGGTAGAAGGTGAAAGGCAACAACTTGTCATGGCT
TTGCGCAATTTTAAAAATGGAAAGAGGTAG