Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037075
CDS Infomation

pacid=37462222 polypeptide=PGSC0003DMP400025176 locus=PGSC0003DMG400014289 ID=PGSC0003DMT400037075.v4.03 annot-version=v4.03
Sequence

ATGGGTGTAAAGAATCTTTGGGATATCTTGGAATCTTGCAAGAAAACTCTTCCTCTTCAT
CATCTCCAGAACAAGAGGGTATGTATAGATCTTTCTTGCTGGATTGTTCAACTTCACAAT
GTCAATAAATCCCATTGTGCAATGAAGGAGAAGCTTTATCTCAGGGGCCTATTTCACCGC
GTCAGAGCTCTTATTGCTTTGAATTGTAGCGTCATCTTTGTTACTGATGGAGCCATTCCT
GCTATCAAATCATCTACTTATAGAAGGCGATTAAATCCTGGAAATGTGCTCACTCAAGAT
GAGGCAGCGATTAAACCATCATCCATACGAAGAAACACAGGATCAGAATTTTCACGCATG
ATAAAAGAGGCTAAAGTCCTTGGAAATGCACTTGGAATTCCGTGCTTAGATGGGATTGAG
GAGGGTGAAGCTCAGTGCGCATTATTAAACTCTGAATCATTCTGTGATGGATGTTTCACA
TCAGATTCTGATGCCTTCCTATTTGGAGCAAGGACAGTGTATAGAGATATGTGCCTTGGG
GACGGCGGGTATCTAGTTTGCTATGAAATGGATGACATTGAGAGAAAGCTCGGACTCGGA
AGGAACTCCTTGATAACACTGGCTGTTATTCTTGGTGGTGATTACTCTGAAGGAGTTTAT
GGGATTGGTCGGGAGTCAGCTTGTCAGATTGTTAAATCAATTGGTGATAAAGCTGTTCTT
CAATGGATTGCATCAGAAGGATTTTCCTTTGTAAAGAAGAAAAAAGGTTCTAAGAAACAG
ACTGAAGATGACAAATGCAATGGTAAAGAAAATGCTGCAGAGCATAAAAATCCTGATGGA
AGCAAATGCCCTTCACAAATGAAAAGTCAGGTGTTGCAAGTATTAGATGCATATCTGAGA
CCAAAGTGCCATTCAGCAGACTCTAATGCTGTTCAAAGGATTCTTGCATTGTATCCATAT
AGCCGCAGCCAGCTTCAGCATATATGCACTGAAACTTTTGGTTGGCCTCCTGAGAAGACA
GATGAGTATATCCTTCCTAAGATTGCTGAAAGGGAATTGCGGAGATTCGCCAACTTGCGG
TCCACTGCATCACAACTGGGAGTCCAGCTTCCACTAAATGAGATGCCAATAAAGTGTCCG
TTATCTCGAATTATCAAGCCAAGAAAAGTTCAAGGAGTTGACTGCTTTGAGGTGTCTTGG
GAAGAAATGGATGGACTCGAAACCTCCATAGTACCAGCTGATCTTGTTGAGAGGGCTTGT
CCGGAAAGGATTTTGGAGTTCCAAGAAAGACGAGCTCAAGGAAAGAAAAGAAACAATGCT
ACATCAAGACCAAGGAAACTAGAAAAAACACAGCTCTTGGGTCAAATTGACCAAAAACTC
CAAGACCTCTTGCTTGAGATTGATAGAGAAACCTCTACTACCAATGATACCACTTCTTTA
TGTGGATCAGTATCAGGGGATGATGACGACATTGGTCAAATTCAGTTGGTAGATCCAGGT
ATACAGTCCCATTATACATGGAACAGCAACTGTGTGAAGAAAGGTGGTGATTTTACTTAC
GGGATCACCAGTTGCCAAAAGAGCATCATTTCACCAGTTTCATCTGAAGATGAAGTAATT
GATCTCACGAGTCCTCCACCACTGCAGCATGCTTCTAGGAACTCCAAACACCTAGAGGAC
AACGTTCAATGCATTGATTTGATTGAGCTTAGTGATTCAGACAATGATATGTCCTCTCCT
GAACATACAAGGAGAGCTAGAGAACTGAGAATGTTCATTGCGGGGATTAAGAACACCTAC
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400025176
PEP Infomation

pacid=37462222 transcript=PGSC0003DMT400037075 locus=PGSC0003DMG400014289 ID=PGSC0003DMT400037075.v4.03 annot-version=v4.03
Sequence

MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWIVQLHNVNKSHCAMKEKLYLRGLFHR
VRALIALNCSVIFVTDGAIPAIKSSTYRRRLNPGNVLTQDEAAIKPSSIRRNTGSEFSRM
IKEAKVLGNALGIPCLDGIEEGEAQCALLNSESFCDGCFTSDSDAFLFGARTVYRDMCLG
DGGYLVCYEMDDIERKLGLGRNSLITLAVILGGDYSEGVYGIGRESACQIVKSIGDKAVL
QWIASEGFSFVKKKKGSKKQTEDDKCNGKENAAEHKNPDGSKCPSQMKSQVLQVLDAYLR
PKCHSADSNAVQRILALYPYSRSQLQHICTETFGWPPEKTDEYILPKIAERELRRFANLR
STASQLGVQLPLNEMPIKCPLSRIIKPRKVQGVDCFEVSWEEMDGLETSIVPADLVERAC
PERILEFQERRAQGKKRNNATSRPRKLEKTQLLGQIDQKLQDLLLEIDRETSTTNDTTSL
CGSVSGDDDDIGQIQLVDPGIQSHYTWNSNCVKKGGDFTYGITSCQKSIISPVSSEDEVI
DLTSPPPLQHASRNSKHLEDNVQCIDLIELSDSDNDMSSPEHTRRARELRMFIAGIKNTY
*

Transcript Sequence

Transcript ID

PGSC0003DMT400037075
Transcript Infomation

pacid=37462222 locus=PGSC0003DMG400014289 ID=PGSC0003DMT400037075.v4.03 annot-version=v4.03
Sequence

ATGGGTGTAAAGAATCTTTGGGATATCTTGGAATCTTGCAAGAAAACTCTTCCTCTTCAT
CATCTCCAGAACAAGAGGGTATGTATAGATCTTTCTTGCTGGATTGTTCAACTTCACAAT
GTCAATAAATCCCATTGTGCAATGAAGGAGAAGCTTTATCTCAGGGGCCTATTTCACCGC
GTCAGAGCTCTTATTGCTTTGAATTGTAGCGTCATCTTTGTTACTGATGGAGCCATTCCT
GCTATCAAATCATCTACTTATAGAAGGCGATTAAATCCTGGAAATGTGCTCACTCAAGAT
GAGGCAGCGATTAAACCATCATCCATACGAAGAAACACAGGATCAGAATTTTCACGCATG
ATAAAAGAGGCTAAAGTCCTTGGAAATGCACTTGGAATTCCGTGCTTAGATGGGATTGAG
GAGGGTGAAGCTCAGTGCGCATTATTAAACTCTGAATCATTCTGTGATGGATGTTTCACA
TCAGATTCTGATGCCTTCCTATTTGGAGCAAGGACAGTGTATAGAGATATGTGCCTTGGG
GACGGCGGGTATCTAGTTTGCTATGAAATGGATGACATTGAGAGAAAGCTCGGACTCGGA
AGGAACTCCTTGATAACACTGGCTGTTATTCTTGGTGGTGATTACTCTGAAGGAGTTTAT
GGGATTGGTCGGGAGTCAGCTTGTCAGATTGTTAAATCAATTGGTGATAAAGCTGTTCTT
CAATGGATTGCATCAGAAGGATTTTCCTTTGTAAAGAAGAAAAAAGGTTCTAAGAAACAG
ACTGAAGATGACAAATGCAATGGTAAAGAAAATGCTGCAGAGCATAAAAATCCTGATGGA
AGCAAATGCCCTTCACAAATGAAAAGTCAGGTGTTGCAAGTATTAGATGCATATCTGAGA
CCAAAGTGCCATTCAGCAGACTCTAATGCTGTTCAAAGGATTCTTGCATTGTATCCATAT
AGCCGCAGCCAGCTTCAGCATATATGCACTGAAACTTTTGGTTGGCCTCCTGAGAAGACA
GATGAGTATATCCTTCCTAAGATTGCTGAAAGGGAATTGCGGAGATTCGCCAACTTGCGG
TCCACTGCATCACAACTGGGAGTCCAGCTTCCACTAAATGAGATGCCAATAAAGTGTCCG
TTATCTCGAATTATCAAGCCAAGAAAAGTTCAAGGAGTTGACTGCTTTGAGGTGTCTTGG
GAAGAAATGGATGGACTCGAAACCTCCATAGTACCAGCTGATCTTGTTGAGAGGGCTTGT
CCGGAAAGGATTTTGGAGTTCCAAGAAAGACGAGCTCAAGGAAAGAAAAGAAACAATGCT
ACATCAAGACCAAGGAAACTAGAAAAAACACAGCTCTTGGGTCAAATTGACCAAAAACTC
CAAGACCTCTTGCTTGAGATTGATAGAGAAACCTCTACTACCAATGATACCACTTCTTTA
TGTGGATCAGTATCAGGGGATGATGACGACATTGGTCAAATTCAGTTGGTAGATCCAGGT
ATACAGTCCCATTATACATGGAACAGCAACTGTGTGAAGAAAGGTGGTGATTTTACTTAC
GGGATCACCAGTTGCCAAAAGAGCATCATTTCACCAGTTTCATCTGAAGATGAAGTAATT
GATCTCACGAGTCCTCCACCACTGCAGCATGCTTCTAGGAACTCCAAACACCTAGAGGAC
AACGTTCAATGCATTGATTTGATTGAGCTTAGTGATTCAGACAATGATATGTCCTCTCCT
GAACATACAAGGAGAGCTAGAGAACTGAGAATGTTCATTGCGGGGATTAAGAACACCTAC
TGA