Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037042
CDS Infomation

pacid=37460446 polypeptide=PGSC0003DMP400025157 locus=PGSC0003DMG400014275 ID=PGSC0003DMT400037042.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTTCTAATCAAACCCCATACTATACTCCAACTTCCAAACCTTCACAACCTACA
CACCCTTTTTCTTCTTGGAAAAGACTCAATCTTTACTATTCTTTAGCTGCCATCACTTTC
CTCTGTTGTGCTTGTTATTACGCCGGCCAATTACAACACACCACCACCACCGTTGGCCTT
CACCTCTCTAACATTGCCTCTAGTTGCTTCTCTTCTCAAAACACAACTTCCCCTGTTTTT
TCATCTTCCCCTGTTTCATCTTCCCAATTGGATTTCACTACTCACCATTCCGCTGGCGAT
GGCGATGGAGGAGCTGTGGTTCCAGATGACACAGTCAAGATTTACCCCCCATGTGACGTT
AAGTACAGTGAGTATACTCCATGTGAAGACCCCGCAAGGTCGTTAAAGTATAACAGAGAC
AGATTGATATACAGAGAAAGACATTGTCCAGAAAAGAGTGAATTCTTGAAATGCCGTATA
CCGGCGCCGTACGGTTACAAGAATCCGTTCAAGTGGCCAATGAGTAGGGATCTGGCGTGG
TATGCTAACGTGCCCCATAAAGAATTGACGGTGGAGAAAGCGGTTCAGAACTGGATTCGA
TTTGAAGGTGACCGGTTTAGATTTCCCGGTGGTGGTACTATGTTCCCTAATGGTGCTGAT
GCATATATTGATGATATTGGAAAATTGATTAATCTTAAAGATGGTTCTATTAGAACCGCC
ATTGATACAGGATGTGGGGTGGCGAGTTGGGGAGCGTACCTTTTGTCAAGGAATATCCTA
GCTATATCATTTGCACCTAGAGATACACATGAAGCACAGGTTCAATTTGCTCTTGAGCGT
GGAGTTCCTGCTTTGATTGGAGTTATTGCTTCCAAGAGACTCCCTTATCCCTCTAGAGCT
TTTGATATGGCTCATTGCTCTCGTTGCCTCATTCCTTGGGGCGAATATGATGGTACGTAC
TTGATTGAAGTTGACAGAGTCCTAAGGCCTGGTGGATATTGGATTCTTTCCGGTCCACCA
ATTCATTGGAGGAAATACTGGAAAGGCTGGGAAAGAACGAAAGAAGACCTAAATGCTGAA
CAAACAAAAATTGAGAAAGTGGCTAGGAGCTTGTGCTGGAAAAAGTTTGTTGAGAAGGAT
GACATTGCTATATGGCAGAAGCCATACAATCATTTACAATGCAAGGAATTGCGAAAGACG
TCAAAAAATCCACCAATGTGTCCTGCTCAAGATCCTGATAGAGCCTGGTACACAGAGATT
GAAACATGTTTAACTTCCTTGCCTGAAGTTTCGAGTGAAGAAAAGGTAGCTGGTGGACAG
TTGGAAAAATGGCCTAAAAGATTACACGCGATACCACCAAGGATTAGCAGAGGAACTCTA
AATGGGGTCACATCGGACACTTTCAACAAGGACTCACAGCTATGGAAACGAAGAGTTTCG
TACTACAAGACAGTGAATAATCAACTTGGCCAACCGGGGAGATACCGAAATCTATTAGAT
ATGAATGCCTACTTGGGTGGTTTTGCTGCCAATTTGGTTGATGATCCTGTTTGGGTCATG
AACATAGTTCCTGCTGAAGCTAATGTTAACACGCTTGGTGTTATCTATGAACGAGGATTA
ATTGGAACATACCAGAGCTGGTGTGAGGCTATGTCAACTTACCCAAGAACATATGATCTT
ATTCATGCTGACTCTGTATTTACTCTCTATAAAGACAGATGTGAAATGGAGGATATATTA
CTTGAGATGGACAGAATATTAAGGCCAGAAGGAAGTGTAATAATTAGAGATGATGTAGAT
ACATTGATCAAAGTAAAGAGGATAACAGATGGACTGAACTGGGATAGCCAAATAGTGGAT
CATGAAGATGGACCATTGGAGAGGGAAAAACTTCTCTTTGCAGTAAAGTCATATTGGACA
GCTCCATCTATCCAAGAATCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025157
PEP Infomation

pacid=37460446 transcript=PGSC0003DMT400037042 locus=PGSC0003DMG400014275 ID=PGSC0003DMT400037042.v4.03 annot-version=v4.03
Sequence

MAGSNQTPYYTPTSKPSQPTHPFSSWKRLNLYYSLAAITFLCCACYYAGQLQHTTTTVGL
HLSNIASSCFSSQNTTSPVFSSSPVSSSQLDFTTHHSAGDGDGGAVVPDDTVKIYPPCDV
KYSEYTPCEDPARSLKYNRDRLIYRERHCPEKSEFLKCRIPAPYGYKNPFKWPMSRDLAW
YANVPHKELTVEKAVQNWIRFEGDRFRFPGGGTMFPNGADAYIDDIGKLINLKDGSIRTA
IDTGCGVASWGAYLLSRNILAISFAPRDTHEAQVQFALERGVPALIGVIASKRLPYPSRA
FDMAHCSRCLIPWGEYDGTYLIEVDRVLRPGGYWILSGPPIHWRKYWKGWERTKEDLNAE
QTKIEKVARSLCWKKFVEKDDIAIWQKPYNHLQCKELRKTSKNPPMCPAQDPDRAWYTEI
ETCLTSLPEVSSEEKVAGGQLEKWPKRLHAIPPRISRGTLNGVTSDTFNKDSQLWKRRVS
YYKTVNNQLGQPGRYRNLLDMNAYLGGFAANLVDDPVWVMNIVPAEANVNTLGVIYERGL
IGTYQSWCEAMSTYPRTYDLIHADSVFTLYKDRCEMEDILLEMDRILRPEGSVIIRDDVD
TLIKVKRITDGLNWDSQIVDHEDGPLEREKLLFAVKSYWTAPSIQES*

Transcript Sequence

Transcript ID

PGSC0003DMT400037042
Transcript Infomation

pacid=37460446 locus=PGSC0003DMG400014275 ID=PGSC0003DMT400037042.v4.03 annot-version=v4.03
Sequence

ATGGCGGGTTCTAATCAAACCCCATACTATACTCCAACTTCCAAACCTTCACAACCTACA
CACCCTTTTTCTTCTTGGAAAAGACTCAATCTTTACTATTCTTTAGCTGCCATCACTTTC
CTCTGTTGTGCTTGTTATTACGCCGGCCAATTACAACACACCACCACCACCGTTGGCCTT
CACCTCTCTAACATTGCCTCTAGTTGCTTCTCTTCTCAAAACACAACTTCCCCTGTTTTT
TCATCTTCCCCTGTTTCATCTTCCCAATTGGATTTCACTACTCACCATTCCGCTGGCGAT
GGCGATGGAGGAGCTGTGGTTCCAGATGACACAGTCAAGATTTACCCCCCATGTGACGTT
AAGTACAGTGAGTATACTCCATGTGAAGACCCCGCAAGGTCGTTAAAGTATAACAGAGAC
AGATTGATATACAGAGAAAGACATTGTCCAGAAAAGAGTGAATTCTTGAAATGCCGTATA
CCGGCGCCGTACGGTTACAAGAATCCGTTCAAGTGGCCAATGAGTAGGGATCTGGCGTGG
TATGCTAACGTGCCCCATAAAGAATTGACGGTGGAGAAAGCGGTTCAGAACTGGATTCGA
TTTGAAGGTGACCGGTTTAGATTTCCCGGTGGTGGTACTATGTTCCCTAATGGTGCTGAT
GCATATATTGATGATATTGGAAAATTGATTAATCTTAAAGATGGTTCTATTAGAACCGCC
ATTGATACAGGATGTGGGGTGGCGAGTTGGGGAGCGTACCTTTTGTCAAGGAATATCCTA
GCTATATCATTTGCACCTAGAGATACACATGAAGCACAGGTTCAATTTGCTCTTGAGCGT
GGAGTTCCTGCTTTGATTGGAGTTATTGCTTCCAAGAGACTCCCTTATCCCTCTAGAGCT
TTTGATATGGCTCATTGCTCTCGTTGCCTCATTCCTTGGGGCGAATATGATGGTACGTAC
TTGATTGAAGTTGACAGAGTCCTAAGGCCTGGTGGATATTGGATTCTTTCCGGTCCACCA
ATTCATTGGAGGAAATACTGGAAAGGCTGGGAAAGAACGAAAGAAGACCTAAATGCTGAA
CAAACAAAAATTGAGAAAGTGGCTAGGAGCTTGTGCTGGAAAAAGTTTGTTGAGAAGGAT
GACATTGCTATATGGCAGAAGCCATACAATCATTTACAATGCAAGGAATTGCGAAAGACG
TCAAAAAATCCACCAATGTGTCCTGCTCAAGATCCTGATAGAGCCTGGTACACAGAGATT
GAAACATGTTTAACTTCCTTGCCTGAAGTTTCGAGTGAAGAAAAGGTAGCTGGTGGACAG
TTGGAAAAATGGCCTAAAAGATTACACGCGATACCACCAAGGATTAGCAGAGGAACTCTA
AATGGGGTCACATCGGACACTTTCAACAAGGACTCACAGCTATGGAAACGAAGAGTTTCG
TACTACAAGACAGTGAATAATCAACTTGGCCAACCGGGGAGATACCGAAATCTATTAGAT
ATGAATGCCTACTTGGGTGGTTTTGCTGCCAATTTGGTTGATGATCCTGTTTGGGTCATG
AACATAGTTCCTGCTGAAGCTAATGTTAACACGCTTGGTGTTATCTATGAACGAGGATTA
ATTGGAACATACCAGAGCTGGTGTGAGGCTATGTCAACTTACCCAAGAACATATGATCTT
ATTCATGCTGACTCTGTATTTACTCTCTATAAAGACAGATGTGAAATGGAGGATATATTA
CTTGAGATGGACAGAATATTAAGGCCAGAAGGAAGTGTAATAATTAGAGATGATGTAGAT
ACATTGATCAAAGTAAAGAGGATAACAGATGGACTGAACTGGGATAGCCAAATAGTGGAT
CATGAAGATGGACCATTGGAGAGGGAAAAACTTCTCTTTGCAGTAAAGTCATATTGGACA
GCTCCATCTATCCAAGAATCTTAA