Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037039
CDS Infomation

pacid=37459286 polypeptide=PGSC0003DMP400025154 locus=PGSC0003DMG400014274 ID=PGSC0003DMT400037039.v4.03 annot-version=v4.03
Sequence

ATGGAGTATTATATGCTGCAAGCATCCCTTCTTTTCTTGATTCCATTCTTCTTCCTCATC
GTTAAACAACTCATACCAAAATCTGGAAATCTTCCACCAGGTCCTCGACCATGGCCTGTG
TTAGGAAATATTCTCCAACTGGGAAAAAACCCCCATATTTCACTGGCAAAATTTGCCGAA
ATTCATGGGCCATTGATTTCTGTCAAGCTGGGAACTCAACTGGTTGTGGTAGCTTCGTCC
CCTCATTCTGCAGCTGAAATCCTTAAGACTCAAGATCGTCTTCTCTCAGCCCGGTCTCCG
CCCAGTGTTGTTCCATATGAACTATCTGTTATTGATCAACACTCAATTGTCTTTTCTAGT
GATTTGGGCAATCACTGGAAGTTCTTGCGGGCATTTTGTCGAACACATTTGTTCTCACCC
AAAGCGGTAGAGTCACAGGCTGCTCTGAGGGATAAAAAAGTGTCGGAAATGATACATTTT
CTTAGGTCTAAGAAAGGGGAAACTGTGAAGATTTCTGAAATTCTGTTTGGTACCATTTTA
AACACGTTAGGGAACCTTTTCTTTTCAAAAGATTTAGTATGTGGTTTGGATTATGAAAGA
AACCCCAGTGGGATCAAACGTGTTTTTAGAAAATATATAGAATTGGGAGCTATGCCAAAT
ATATCAGATTTCTATCCTTTATTTGAGGCTCTGGATCTGCAGGGATTGAGAAAGCAGACG
GAAATATATCAGAGTCGATTGATCAACATCTGGAGTGAAATTGTCAAGGAAAAAAGGCAG
GCAATTAGCCGTCATAGCTCGGATTTTTTGGATGTTATGATTGATAGTGGATTCTCAGAT
TTACAGATCAATATCTTAGTGACAGAATTAATGGGTGCGGGTTCTGACACCACAACCTCA
ACAATTGAATGGGCAATGACAGAGTTGCTAAGGAACAACGGCGCTATGCACAAACTTCAG
GCTGAGCTTACAAGTAAATTTGGGGAAAATGATACTATCACAGAATCAAACATCAGTGAA
CTTCCATATTTGGCTGCTTGTGTCAAGGAGACATTGAGACTCCATTCGCCTACTCCCTTC
TTGATTCCTCGTCGTGCTCCTGAGACGTGTAAGATTATGAATTACACCATCCCAAAGAAC
TCGAAGTTGTTTGTGAATGCTTACGCAATTGGGCGTGACTCCAACACATGGGAAGATGCA
TTATCTTTCAAGCCAGAGCGATTTCTTGACTCCAAGGTGGACTTCAGGGGTCAAGATTTT
GAGTTCATACCATTTGGTGCAGGGAGGAGAATATGCCCTGGCTTAGGTTTTGCTATACAA
GAAGTTCACTTGATTTTAGCTAGTTTGATCCATCATTTTAAGTGGTCACTACCCAATGAT
GAGGATCCAATGCAGTTAGATATGGAAGAAAAGTTTGGTGTTACTCTACAGAAAGAAAAG
CCTCTATTTATTGTCCCTATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025154
PEP Infomation

pacid=37459286 transcript=PGSC0003DMT400037039 locus=PGSC0003DMG400014274 ID=PGSC0003DMT400037039.v4.03 annot-version=v4.03
Sequence

MEYYMLQASLLFLIPFFFLIVKQLIPKSGNLPPGPRPWPVLGNILQLGKNPHISLAKFAE
IHGPLISVKLGTQLVVVASSPHSAAEILKTQDRLLSARSPPSVVPYELSVIDQHSIVFSS
DLGNHWKFLRAFCRTHLFSPKAVESQAALRDKKVSEMIHFLRSKKGETVKISEILFGTIL
NTLGNLFFSKDLVCGLDYERNPSGIKRVFRKYIELGAMPNISDFYPLFEALDLQGLRKQT
EIYQSRLINIWSEIVKEKRQAISRHSSDFLDVMIDSGFSDLQINILVTELMGAGSDTTTS
TIEWAMTELLRNNGAMHKLQAELTSKFGENDTITESNISELPYLAACVKETLRLHSPTPF
LIPRRAPETCKIMNYTIPKNSKLFVNAYAIGRDSNTWEDALSFKPERFLDSKVDFRGQDF
EFIPFGAGRRICPGLGFAIQEVHLILASLIHHFKWSLPNDEDPMQLDMEEKFGVTLQKEK
PLFIVPM*

Transcript Sequence

Transcript ID

PGSC0003DMT400037039
Transcript Infomation

pacid=37459286 locus=PGSC0003DMG400014274 ID=PGSC0003DMT400037039.v4.03 annot-version=v4.03
Sequence

ATGGAGTATTATATGCTGCAAGCATCCCTTCTTTTCTTGATTCCATTCTTCTTCCTCATC
GTTAAACAACTCATACCAAAATCTGGAAATCTTCCACCAGGTCCTCGACCATGGCCTGTG
TTAGGAAATATTCTCCAACTGGGAAAAAACCCCCATATTTCACTGGCAAAATTTGCCGAA
ATTCATGGGCCATTGATTTCTGTCAAGCTGGGAACTCAACTGGTTGTGGTAGCTTCGTCC
CCTCATTCTGCAGCTGAAATCCTTAAGACTCAAGATCGTCTTCTCTCAGCCCGGTCTCCG
CCCAGTGTTGTTCCATATGAACTATCTGTTATTGATCAACACTCAATTGTCTTTTCTAGT
GATTTGGGCAATCACTGGAAGTTCTTGCGGGCATTTTGTCGAACACATTTGTTCTCACCC
AAAGCGGTAGAGTCACAGGCTGCTCTGAGGGATAAAAAAGTGTCGGAAATGATACATTTT
CTTAGGTCTAAGAAAGGGGAAACTGTGAAGATTTCTGAAATTCTGTTTGGTACCATTTTA
AACACGTTAGGGAACCTTTTCTTTTCAAAAGATTTAGTATGTGGTTTGGATTATGAAAGA
AACCCCAGTGGGATCAAACGTGTTTTTAGAAAATATATAGAATTGGGAGCTATGCCAAAT
ATATCAGATTTCTATCCTTTATTTGAGGCTCTGGATCTGCAGGGATTGAGAAAGCAGACG
GAAATATATCAGAGTCGATTGATCAACATCTGGAGTGAAATTGTCAAGGAAAAAAGGCAG
GCAATTAGCCGTCATAGCTCGGATTTTTTGGATGTTATGATTGATAGTGGATTCTCAGAT
TTACAGATCAATATCTTAGTGACAGAATTAATGGGTGCGGGTTCTGACACCACAACCTCA
ACAATTGAATGGGCAATGACAGAGTTGCTAAGGAACAACGGCGCTATGCACAAACTTCAG
GCTGAGCTTACAAGTAAATTTGGGGAAAATGATACTATCACAGAATCAAACATCAGTGAA
CTTCCATATTTGGCTGCTTGTGTCAAGGAGACATTGAGACTCCATTCGCCTACTCCCTTC
TTGATTCCTCGTCGTGCTCCTGAGACGTGTAAGATTATGAATTACACCATCCCAAAGAAC
TCGAAGTTGTTTGTGAATGCTTACGCAATTGGGCGTGACTCCAACACATGGGAAGATGCA
TTATCTTTCAAGCCAGAGCGATTTCTTGACTCCAAGGTGGACTTCAGGGGTCAAGATTTT
GAGTTCATACCATTTGGTGCAGGGAGGAGAATATGCCCTGGCTTAGGTTTTGCTATACAA
GAAGTTCACTTGATTTTAGCTAGTTTGATCCATCATTTTAAGTGGTCACTACCCAATGAT
GAGGATCCAATGCAGTTAGATATGGAAGAAAAGTTTGGTGTTACTCTACAGAAAGAAAAG
CCTCTATTTATTGTCCCTATGTAA