Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400037007
CDS Infomation

pacid=37461646 polypeptide=PGSC0003DMP400025131 locus=PGSC0003DMG400014264 ID=PGSC0003DMT400037007.v4.03 annot-version=v4.03
Sequence

ATGATGATGAGTGATGACTATCTCTCACTTCTCCTTCTGCTTCCTCTCTTAGCTCCGGCC
ATGAGAATCCTCACTTCTCCTTTCCCAATCGCCCCACCTCACTCTAAATCCATCATACCC
AGAACTAAATTTCATCAATGCAGAGTTGCCATAAAGCCACCACCACCTAACTTCAATTTC
AAGAATGAATATTTCAGCACCTCTCGGGATGCTATTGAACAAACCCATCCCGAATTGCTC
GATTTGGCTGATAATGGAACTCTGTTTCTCATCAAGAAGAACCAATTTGGACCTGTTCCA
TCGTGGAGAACCGAGTTTGTTGAACCAGAGGCTATTTGGCTGATTGGAACGAACCATCTT
TCTATGCAATCGGCTGTGGATGTTGAAAGGGTCATCCGTACTCTCAAGCCGGAGAATGTG
GTTGTGGAGCTTTGTAGAAGCAGGGCTGGCATCATGTACACTTCTGACGAAATTGATCTC
AATCAGCCCTTAAAATCAAACATGTTCTCTTTGAGTGGAACTGGGTTTTTCGGTGCTGTT
GGTCGTAGCATTAACTTGGGGGGTCAAACTGCTCTAGCATTACGCGTCTTGCTGGCACTT
TTCTCTTCAAAAATGTCTTCAAGTGCTAATCGGCCTTTTGGAGATGAGTTCCGTGCTGCT
CGAAAGGCTGCTGAGGATACTGGTGCTCAAATTGTATTGGGGGATCGGCCAATAGAAATA
ACTCTTGAACGAGCATGGACTTCACTAAAATGGAAAGAGAAGACGAGCCTTCTACTCTCT
GTCTTTGGCGGAATAACCTCATCCGCTGAACTATCAACAAAGGCATTGAAGGAATCAAGT
TCTGATGATAGTAGCTTTCAGCTGTATGAGAAATTAAGCTTTTCATATCCATCACTTCTG
CAGCCACTCCTACATGAACGTGACACGTTTCTTGCTTGGTCTCTGAAGAGGAGCAAAGCT
GTGAACAACTGTAAGCAAGTTGTCGGAATCATTGGGAAAGGTCACATGAATGGAGTAATA
TATTCCTTGGTGTCTGATCAAGGAAACTTGCGTTTTCGAGATCTAGCTGGGAAGAGTCCT
TCAGGGGGACTCTCTGGCTGGACAACTACCATCTTTGGAAACCTGGTTAGAGACACTATA
ATTGGTGTTCTCCTGTGGCTATTGTATGAACAACTAACCAGTGGTTTGAAGTTGATTGAT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400025131
PEP Infomation

pacid=37461646 transcript=PGSC0003DMT400037007 locus=PGSC0003DMG400014264 ID=PGSC0003DMT400037007.v4.03 annot-version=v4.03
Sequence

MMMSDDYLSLLLLLPLLAPAMRILTSPFPIAPPHSKSIIPRTKFHQCRVAIKPPPPNFNF
KNEYFSTSRDAIEQTHPELLDLADNGTLFLIKKNQFGPVPSWRTEFVEPEAIWLIGTNHL
SMQSAVDVERVIRTLKPENVVVELCRSRAGIMYTSDEIDLNQPLKSNMFSLSGTGFFGAV
GRSINLGGQTALALRVLLALFSSKMSSSANRPFGDEFRAARKAAEDTGAQIVLGDRPIEI
TLERAWTSLKWKEKTSLLLSVFGGITSSAELSTKALKESSSDDSSFQLYEKLSFSYPSLL
QPLLHERDTFLAWSLKRSKAVNNCKQVVGIIGKGHMNGVIYSLVSDQGNLRFRDLAGKSP
SGGLSGWTTTIFGNLVRDTIIGVLLWLLYEQLTSGLKLID*

Transcript Sequence

Transcript ID

PGSC0003DMT400037007
Transcript Infomation

pacid=37461646 locus=PGSC0003DMG400014264 ID=PGSC0003DMT400037007.v4.03 annot-version=v4.03
Sequence

ATGATGATGAGTGATGACTATCTCTCACTTCTCCTTCTGCTTCCTCTCTTAGCTCCGGCC
ATGAGAATCCTCACTTCTCCTTTCCCAATCGCCCCACCTCACTCTAAATCCATCATACCC
AGAACTAAATTTCATCAATGCAGAGTTGCCATAAAGCCACCACCACCTAACTTCAATTTC
AAGAATGAATATTTCAGCACCTCTCGGGATGCTATTGAACAAACCCATCCCGAATTGCTC
GATTTGGCTGATAATGGAACTCTGTTTCTCATCAAGAAGAACCAATTTGGACCTGTTCCA
TCGTGGAGAACCGAGTTTGTTGAACCAGAGGCTATTTGGCTGATTGGAACGAACCATCTT
TCTATGCAATCGGCTGTGGATGTTGAAAGGGTCATCCGTACTCTCAAGCCGGAGAATGTG
GTTGTGGAGCTTTGTAGAAGCAGGGCTGGCATCATGTACACTTCTGACGAAATTGATCTC
AATCAGCCCTTAAAATCAAACATGTTCTCTTTGAGTGGAACTGGGTTTTTCGGTGCTGTT
GGTCGTAGCATTAACTTGGGGGGTCAAACTGCTCTAGCATTACGCGTCTTGCTGGCACTT
TTCTCTTCAAAAATGTCTTCAAGTGCTAATCGGCCTTTTGGAGATGAGTTCCGTGCTGCT
CGAAAGGCTGCTGAGGATACTGGTGCTCAAATTGTATTGGGGGATCGGCCAATAGAAATA
ACTCTTGAACGAGCATGGACTTCACTAAAATGGAAAGAGAAGACGAGCCTTCTACTCTCT
GTCTTTGGCGGAATAACCTCATCCGCTGAACTATCAACAAAGGCATTGAAGGAATCAAGT
TCTGATGATAGTAGCTTTCAGCTGTATGAGAAATTAAGCTTTTCATATCCATCACTTCTG
CAGCCACTCCTACATGAACGTGACACGTTTCTTGCTTGGTCTCTGAAGAGGAGCAAAGCT
GTGAACAACTGTAAGCAAGTTGTCGGAATCATTGGGAAAGGTCACATGAATGGAGTAATA
TATTCCTTGGTGTCTGATCAAGGAAACTTGCGTTTTCGAGATCTAGCTGGGAAGAGTCCT
TCAGGGGGACTCTCTGGCTGGACAACTACCATCTTTGGAAACCTGGTTAGAGACACTATA
ATTGGTGTTCTCCTGTGGCTATTGTATGAACAACTAACCAGTGGTTTGAAGTTGATTGAT
TAA