Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036996
CDS Infomation

pacid=37459818 polypeptide=PGSC0003DMP400025120 locus=PGSC0003DMG400014261 ID=PGSC0003DMT400036996.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTGCCAAGAGCAACAGCAACACTGAATCATCATTTTATACATCATGTTGCTAT
AAAGTTGCAAACTTGAGTGGGACCATTTTGGATGCAAGTCATACTGCTAATCTGCATGAT
CGTTACGTTCTTGGAGAACAGCTGGGCTGGGGACAGTTTGGGATAATCAGGACATGCTCT
GACAAGTTTACCGGAGAGGTGTTGGCCTGCAAATCAATTGCAAAAAATAGATTGGTGACT
CAGGAGGATGTGCGAAGTGTCAAGCTTGAAATTGAAATAATGACCAGGCTTTCTGGCCAC
CCAAATGTTGTAGATCTCAAGGCGGTTTATGAGGAAGAAGATTGTGTACATCTAGTAATG
GAGCTTTGTGCTGGGGGAGAACTTTTCCACCAGCTGGAGAGGCATGGTAGATTTTCCGAG
GCTGAGGCCAGGGTTCTCTTCCATGACCTAATGGAAGTGGTGATGTACTGCCATCATAAA
GGCATTGTACACAGAGATCTTAAGCCAGAGAACATTCTCTTGGCTACAAAGGGTTCTTCT
TCTCCGATAAAATTAGCTGATTTTGGTCTCGCAACTTACATCAAGCCAGGTCAAAGTTTG
CATGGTACTGTTGGCAGCCCATTTTATATAGCTCCTGAGGTCCTGGCAGGAGGTTATAAT
GAAGCAGCTGATATCTGGAGCACTGGTGTTATTCTTTACATTCTTCTTAGTGGAATACCA
CCATTTTGGGGGAAGACAAAGTCAAAGATCTTTGATGCTGTCAGGGCAGCTGATTTGCGG
TTTCCTTCTGATCGGTGGGATACAATATCATCTTCAGCAAAAGAGTTGATTAAAGGAATG
CTATGTACGGATCCTTCCCAGAGGCTTACACCTCAGCAAATTCTAGATCATGCTTGGGTA
CGGGATATCTCACCGCATTTCAATGAACCATGCCTAAAAGTGCATTCAGATGAAGGCTCC
TGCTGCTCTTCTCTTATGACTCGGAATCAGGATATCAGTTTTGGCACAGGTTCTGCCGTT
TTAATTGATGCCCAATCGCCAAAATTCACGTGCAAGTCATCATTTTCTACTTTACTAACC
GAACAATCAACAACTTCCTATGGATCCGCTGTATTCTCTTTCAGTAGTACTAATGGATCA
AATGGCCATGACTTTGCTTCTCCTGTTCTAACACTGCCTAGTTTTACATTCTTCGGCTCA
AGTTTAGTTGTTGATCAAGGGAGTTATGAAGTTGATTTATCTGTTAGGGCATCTGATGTG
GATTTACTTCATAAAGATGCCAGTGTGGGAAAGGTGTTTATGTTGTCAGAGTCTCCTGTA
AGCCTTGAGCAAGTGGTAAGAGATAAGACAGCAGAAGTTAGAAAGAGTGGATCAAATGGA
TCTAGAACTCTAGGCATCCAGAGCAGGAGGAACCATACAATTGGTCTTGGTGAATTTGAG
CAGATTGATATTGTGGTGACCGAAACAGTTATCCGATGGGCGTCGTGCACATGTCTTCCT
ACCGCCACATCACTCAGGTCTTCTCTTGTCTGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025120
PEP Infomation

pacid=37459818 transcript=PGSC0003DMT400036996 locus=PGSC0003DMG400014261 ID=PGSC0003DMT400036996.v4.03 annot-version=v4.03
Sequence

MAVAKSNSNTESSFYTSCCYKVANLSGTILDASHTANLHDRYVLGEQLGWGQFGIIRTCS
DKFTGEVLACKSIAKNRLVTQEDVRSVKLEIEIMTRLSGHPNVVDLKAVYEEEDCVHLVM
ELCAGGELFHQLERHGRFSEAEARVLFHDLMEVVMYCHHKGIVHRDLKPENILLATKGSS
SPIKLADFGLATYIKPGQSLHGTVGSPFYIAPEVLAGGYNEAADIWSTGVILYILLSGIP
PFWGKTKSKIFDAVRAADLRFPSDRWDTISSSAKELIKGMLCTDPSQRLTPQQILDHAWV
RDISPHFNEPCLKVHSDEGSCCSSLMTRNQDISFGTGSAVLIDAQSPKFTCKSSFSTLLT
EQSTTSYGSAVFSFSSTNGSNGHDFASPVLTLPSFTFFGSSLVVDQGSYEVDLSVRASDV
DLLHKDASVGKVFMLSESPVSLEQVVRDKTAEVRKSGSNGSRTLGIQSRRNHTIGLGEFE
QIDIVVTETVIRWASCTCLPTATSLRSSLVC*

Transcript Sequence

Transcript ID

PGSC0003DMT400036996
Transcript Infomation

pacid=37459818 locus=PGSC0003DMG400014261 ID=PGSC0003DMT400036996.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTGCCAAGAGCAACAGCAACACTGAATCATCATTTTATACATCATGTTGCTAT
AAAGTTGCAAACTTGAGTGGGACCATTTTGGATGCAAGTCATACTGCTAATCTGCATGAT
CGTTACGTTCTTGGAGAACAGCTGGGCTGGGGACAGTTTGGGATAATCAGGACATGCTCT
GACAAGTTTACCGGAGAGGTGTTGGCCTGCAAATCAATTGCAAAAAATAGATTGGTGACT
CAGGAGGATGTGCGAAGTGTCAAGCTTGAAATTGAAATAATGACCAGGCTTTCTGGCCAC
CCAAATGTTGTAGATCTCAAGGCGGTTTATGAGGAAGAAGATTGTGTACATCTAGTAATG
GAGCTTTGTGCTGGGGGAGAACTTTTCCACCAGCTGGAGAGGCATGGTAGATTTTCCGAG
GCTGAGGCCAGGGTTCTCTTCCATGACCTAATGGAAGTGGTGATGTACTGCCATCATAAA
GGCATTGTACACAGAGATCTTAAGCCAGAGAACATTCTCTTGGCTACAAAGGGTTCTTCT
TCTCCGATAAAATTAGCTGATTTTGGTCTCGCAACTTACATCAAGCCAGGTCAAAGTTTG
CATGGTACTGTTGGCAGCCCATTTTATATAGCTCCTGAGGTCCTGGCAGGAGGTTATAAT
GAAGCAGCTGATATCTGGAGCACTGGTGTTATTCTTTACATTCTTCTTAGTGGAATACCA
CCATTTTGGGGGAAGACAAAGTCAAAGATCTTTGATGCTGTCAGGGCAGCTGATTTGCGG
TTTCCTTCTGATCGGTGGGATACAATATCATCTTCAGCAAAAGAGTTGATTAAAGGAATG
CTATGTACGGATCCTTCCCAGAGGCTTACACCTCAGCAAATTCTAGATCATGCTTGGGTA
CGGGATATCTCACCGCATTTCAATGAACCATGCCTAAAAGTGCATTCAGATGAAGGCTCC
TGCTGCTCTTCTCTTATGACTCGGAATCAGGATATCAGTTTTGGCACAGGTTCTGCCGTT
TTAATTGATGCCCAATCGCCAAAATTCACGTGCAAGTCATCATTTTCTACTTTACTAACC
GAACAATCAACAACTTCCTATGGATCCGCTGTATTCTCTTTCAGTAGTACTAATGGATCA
AATGGCCATGACTTTGCTTCTCCTGTTCTAACACTGCCTAGTTTTACATTCTTCGGCTCA
AGTTTAGTTGTTGATCAAGGGAGTTATGAAGTTGATTTATCTGTTAGGGCATCTGATGTG
GATTTACTTCATAAAGATGCCAGTGTGGGAAAGGTGTTTATGTTGTCAGAGTCTCCTGTA
AGCCTTGAGCAAGTGGTAAGAGATAAGACAGCAGAAGTTAGAAAGAGTGGATCAAATGGA
TCTAGAACTCTAGGCATCCAGAGCAGGAGGAACCATACAATTGGTCTTGGTGAATTTGAG
CAGATTGATATTGTGGTGACCGAAACAGTTATCCGATGGGCGTCGTGCACATGTCTTCCT
ACCGCCACATCACTCAGGTCTTCTCTTGTCTGCTGA