Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036938
CDS Infomation

pacid=37461923 polypeptide=PGSC0003DMP400025080 locus=PGSC0003DMG400014242 ID=PGSC0003DMT400036938.v4.03 annot-version=v4.03
Sequence

ATGTGGGAAGAAGAAGCAAAGGGTATAAGAAGGGACGAAGAAGAAGCGCTGTTGGATCTG
ATTGAGCAACGTACTAAGAATGTTGAAAAAATTGGAAGAGCAATCGCTTATTATACTTGC
GAGCTTGAACAAAAAGAGAAGAACTTAGAGGAGGCACAACAGCAACTTGCTCGCCTCCGG
GCCCAGGCCATTGTGGCAACATCCACAAGCTATCATGGGAATGACTTGAATCTAGTGAAA
GTCGAAAGACGATCCATGAGTCCTATCCAGATAAGTGATGATTCTTCTGAAAGCCTCTCT
GAGTGTGAACCTCAACCTGACAAAGACAACACTGTGCCACTTCAGAAATCTTCAACACTT
GATAAAAAATTAGCAAGACCTTTTCAGAAAAACAATGATGATTCCGGAAAGCCTCCCCGA
GCAAAACCACTACTTATCATTCCAGACATGAAACCAAAGGGTTCTCTGCATTTGAAGATG
GAAGAATCTAGTCCCACCCCATGTTTTTCTGACTCTTGTGCTGGAGGCTCAGTTTTTTCT
TTTCGTAACACTCGTATCGTAAGGTCAAAAGCAGATAAGAGCGTAAAAACCCCTCCTGAC
ACCGGAGCTGCTGATATTGAACATAAAGGAACAAAACGGAAGTCTGAACAAATAGAGCAT
AAAGAGCTGATTCCATTGATAGGTAGATCCTCTTCAGCAAGCAAGCTACAATGCCAAACA
ACCAGTGTCATACCTAGTCAACACACGCGAAAGCTGAGAAATATTGTCTTGTGCCCTACT
AATGATCAACTTTTTGCGAGCAGTGCGCTGGATGGGGTTGTCAACTTGTGGCAGGTGCAG
GACAGGGGGTCAAGTGCCAATCTTCTCAGTAGCACTGATTGCTTTACCCACAAGTGTAAA
AGATGGCCAGAAGACGTAGCCTGGCATCCAGAAGGAAGCAGCCTTTTTTCTGTGTACCGC
GCTGATGAGGGGGATTCACAAATTTCAATATTGAATCTTAACAAGAGAAAAGAGAATATG
CAAGTGAATTTCTTGGAGGATAAGCCCCATGTCAAAGGGATCATTAACAACATAGAGTTC
ATGCCATGGAAGGAGGGCTGTTTTGTTACTGGTGGTTGTGATCATGCCGTTATCTTGTGG
ACCAATAAAGATGGAGAACATTCATGGAAGCCTAAAGAGTTGCATAGCCAGCATTCTTCT
GCTGTAATGGGAGTTGCCGGTTTGCAGCATAAGAAAGTCGTGATGTCTGCTGGTGCCGAT
AAGCGTATATTTGGATTTGATTTACCAGCTCAGAGAATTGGTTACAAGCACCAAGTAGAA
AGTAAATGCATGAGTGTTCTTCCTAATCCATGTGACTTGAATCTATTTATGATTCAGACA
GGGACCTTAGAGAAGCAGCTTCGCTTGTTTGACTTTAGGTCAAGGGAAGCAGAGACCCAT
TCCTTCGGGTGGAAACAAGAAAGCAGTGACTCACACTCGGCTCTTATAAATCAGGCTTGG
TCACCTGATGGTTTGTACATTACATCTGGCTCAGTTGATCCTGCCATTCACATATTTGAT
ATACGGTACAATTCTCACGAACCTTGCCTGTCCATTAGAGCTCATAATAGGCAAGTCTTC
AAAGCTGTTTGGCACCATGCCCTCCCAGTCCTCATTTCTATATCATCTGACTTGAACATT
GGATTTCATAAAATCGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025080
PEP Infomation

pacid=37461923 transcript=PGSC0003DMT400036938 locus=PGSC0003DMG400014242 ID=PGSC0003DMT400036938.v4.03 annot-version=v4.03
Sequence

MWEEEAKGIRRDEEEALLDLIEQRTKNVEKIGRAIAYYTCELEQKEKNLEEAQQQLARLR
AQAIVATSTSYHGNDLNLVKVERRSMSPIQISDDSSESLSECEPQPDKDNTVPLQKSSTL
DKKLARPFQKNNDDSGKPPRAKPLLIIPDMKPKGSLHLKMEESSPTPCFSDSCAGGSVFS
FRNTRIVRSKADKSVKTPPDTGAADIEHKGTKRKSEQIEHKELIPLIGRSSSASKLQCQT
TSVIPSQHTRKLRNIVLCPTNDQLFASSALDGVVNLWQVQDRGSSANLLSSTDCFTHKCK
RWPEDVAWHPEGSSLFSVYRADEGDSQISILNLNKRKENMQVNFLEDKPHVKGIINNIEF
MPWKEGCFVTGGCDHAVILWTNKDGEHSWKPKELHSQHSSAVMGVAGLQHKKVVMSAGAD
KRIFGFDLPAQRIGYKHQVESKCMSVLPNPCDLNLFMIQTGTLEKQLRLFDFRSREAETH
SFGWKQESSDSHSALINQAWSPDGLYITSGSVDPAIHIFDIRYNSHEPCLSIRAHNRQVF
KAVWHHALPVLISISSDLNIGFHKIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400036938
Transcript Infomation

pacid=37461923 locus=PGSC0003DMG400014242 ID=PGSC0003DMT400036938.v4.03 annot-version=v4.03
Sequence

ATGTGGGAAGAAGAAGCAAAGGGTATAAGAAGGGACGAAGAAGAAGCGCTGTTGGATCTG
ATTGAGCAACGTACTAAGAATGTTGAAAAAATTGGAAGAGCAATCGCTTATTATACTTGC
GAGCTTGAACAAAAAGAGAAGAACTTAGAGGAGGCACAACAGCAACTTGCTCGCCTCCGG
GCCCAGGCCATTGTGGCAACATCCACAAGCTATCATGGGAATGACTTGAATCTAGTGAAA
GTCGAAAGACGATCCATGAGTCCTATCCAGATAAGTGATGATTCTTCTGAAAGCCTCTCT
GAGTGTGAACCTCAACCTGACAAAGACAACACTGTGCCACTTCAGAAATCTTCAACACTT
GATAAAAAATTAGCAAGACCTTTTCAGAAAAACAATGATGATTCCGGAAAGCCTCCCCGA
GCAAAACCACTACTTATCATTCCAGACATGAAACCAAAGGGTTCTCTGCATTTGAAGATG
GAAGAATCTAGTCCCACCCCATGTTTTTCTGACTCTTGTGCTGGAGGCTCAGTTTTTTCT
TTTCGTAACACTCGTATCGTAAGGTCAAAAGCAGATAAGAGCGTAAAAACCCCTCCTGAC
ACCGGAGCTGCTGATATTGAACATAAAGGAACAAAACGGAAGTCTGAACAAATAGAGCAT
AAAGAGCTGATTCCATTGATAGGTAGATCCTCTTCAGCAAGCAAGCTACAATGCCAAACA
ACCAGTGTCATACCTAGTCAACACACGCGAAAGCTGAGAAATATTGTCTTGTGCCCTACT
AATGATCAACTTTTTGCGAGCAGTGCGCTGGATGGGGTTGTCAACTTGTGGCAGGTGCAG
GACAGGGGGTCAAGTGCCAATCTTCTCAGTAGCACTGATTGCTTTACCCACAAGTGTAAA
AGATGGCCAGAAGACGTAGCCTGGCATCCAGAAGGAAGCAGCCTTTTTTCTGTGTACCGC
GCTGATGAGGGGGATTCACAAATTTCAATATTGAATCTTAACAAGAGAAAAGAGAATATG
CAAGTGAATTTCTTGGAGGATAAGCCCCATGTCAAAGGGATCATTAACAACATAGAGTTC
ATGCCATGGAAGGAGGGCTGTTTTGTTACTGGTGGTTGTGATCATGCCGTTATCTTGTGG
ACCAATAAAGATGGAGAACATTCATGGAAGCCTAAAGAGTTGCATAGCCAGCATTCTTCT
GCTGTAATGGGAGTTGCCGGTTTGCAGCATAAGAAAGTCGTGATGTCTGCTGGTGCCGAT
AAGCGTATATTTGGATTTGATTTACCAGCTCAGAGAATTGGTTACAAGCACCAAGTAGAA
AGTAAATGCATGAGTGTTCTTCCTAATCCATGTGACTTGAATCTATTTATGATTCAGACA
GGGACCTTAGAGAAGCAGCTTCGCTTGTTTGACTTTAGGTCAAGGGAAGCAGAGACCCAT
TCCTTCGGGTGGAAACAAGAAAGCAGTGACTCACACTCGGCTCTTATAAATCAGGCTTGG
TCACCTGATGGTTTGTACATTACATCTGGCTCAGTTGATCCTGCCATTCACATATTTGAT
ATACGGTACAATTCTCACGAACCTTGCCTGTCCATTAGAGCTCATAATAGGCAAGTCTTC
AAAGCTGTTTGGCACCATGCCCTCCCAGTCCTCATTTCTATATCATCTGACTTGAACATT
GGATTTCATAAAATCGTTTGA