Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036918
CDS Infomation

pacid=37463610 polypeptide=PGSC0003DMP400025060 locus=PGSC0003DMG400014230 ID=PGSC0003DMT400036918.v4.03 annot-version=v4.03
Sequence

ATGGCTTGTTACGCGGCGAGTGAAAAGGGCGGCGACGTGTTTTTCCCAATTCCGGCACGT
TCAGTTCGTCGGTCTTTGCGCTTGCCCATGTTCGTACTTGTATTTACTTTGTTGCTAAAT
AGCAGCTGTGTTTCTTCATACTCATCAGGATACTGGGATTTTACCTGCAACAATTCCACA
GATATGGAAAGAGGGAAGTTGGGTCCCCAAAACCCCGGTGTATGCTCAGGAAAGGCCACA
CATCTTCCAGTTTGTGAATGTGGATTCAAAATGTTGGACTCTTGCTTCTTGAATAAGAAC
AAGATGCTTGAAATCGAAAAGGGAGCAAATGACCTTAACATACCCATAATCAGATCCAAC
CGAAAGTTAGTTGCCTCTATTGATGGAGGTCTGCATAAACCGTCTTGTTTAGTCTTCAAT
TCTGCATGGAAGGCCCGACAACTAGAACATGAACCAAACAAAAAGCTCAATTATCCATCA
CCTGCTGGTATACAAAGACCAAAAAGTGACGAGGATATCGCATTCATGAGTATTCTTGAA
CTTGGTCAGCTTCTCAAGGCAAATTTAATCACATCAGTGGAGCTGACTGGAATTTTCTTG
AAGAGACTGAAGAGGTATGGTCCTGTTCTTGAATCGGTCGTTACAATTACTGAAGAATTA
GCATACAAACAAGCAAAAGAGGCTGATCAACTGCTTGCTGAAGGCAAATATTTAGGTCCT
CTTCATGGGATTCCTTATGGTCTGAAGGACATCATAGCAGTACCTAACTATACCACAACA
TGGGGTTCAACATCTTTTAAAGTCCAAGTTCTTGATATTGAAGCTTGGGTTTATAAGAGG
CTGAAATCTGCCGGGGCAGTTCTTGTTGCAAAGTTAGTAACTGGTTCTTTAGCATATGAT
GATATCTGGTTTGGTGGTAGAACAAGAAACCCGTGGAATATCGAGGAATATTCTACGGGA
TCATCAGCAGGTCCTGCTTCTTGCACCTCAGCAGGTTTGGTTCCATTTGCAATTGGTTCA
GAAACTTCCGGCTCTATTACCTATCCAGCTTCCCGCTGTGGCGTGACGGCACTGCGGCCC
ACTTTTGGAGCTGTCGGCCGAACGGGTGTTATGAGCATAGCTGAAAGCTTGGATAAATTA
GGCCCTTTTTGTAGAAACTCTGTGGATTGTGTGGTTGTTCTGGATGCCATTCGGGGAAAG
GACCCAGATGATGTTTCATCTAGAGACATATCCTTTGGAGATCCATTCTCAGTTGATATC
ACAAAGCTCACTGTTGGATATCTTGAGGACGCTGAGATGGAAGTCGTTCATGTACTTCAA
TCAAAAGGAGTGAATATGGTCCCATTTAACCTGAGTTACACTGTTGATTCTGTCCAAGGT
ATTCTCAATTTCACAATGGATGTTGAGATGCTGGCTCACTTCGATAAATGGCAGCGCTCA
AATCTGGATGATGAATATGAAGCTCAAGATCAATGGCCTATTGAACTTCGCCGAGCACGT
GCCATATCTGCAGTTGACTATTTTCAGGCACAAAGAGCTAGAGGTATATTGATTCAGCAA
GTAAGAGAAAGTTTCAGTGTTGATGCATTTATTGGAAATGCAACTGACTGGGAGAAAGTT
TGTGTTGGCAATCTAGTGGGTTTTCCAGTAGTAGTTGTTCCAACAGGATTCAAAAAGATA
TCTGATGCACCATCAAATGATACTCGCAGGAGAACAACAATAACTACAGGAATATATGCT
CCTCCAGACCGTGATCATGTCGCCCTAGCTTTAGCAATTGCTTATCAATCAGTCACCAAT
CATCATAAGCAGCGGCCACCAATTGATGACCTTGGGCCAAATGATCCTATTCCAGAATCA
CCAAAATCCCTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400025060
PEP Infomation

pacid=37463610 transcript=PGSC0003DMT400036918 locus=PGSC0003DMG400014230 ID=PGSC0003DMT400036918.v4.03 annot-version=v4.03
Sequence

MACYAASEKGGDVFFPIPARSVRRSLRLPMFVLVFTLLLNSSCVSSYSSGYWDFTCNNST
DMERGKLGPQNPGVCSGKATHLPVCECGFKMLDSCFLNKNKMLEIEKGANDLNIPIIRSN
RKLVASIDGGLHKPSCLVFNSAWKARQLEHEPNKKLNYPSPAGIQRPKSDEDIAFMSILE
LGQLLKANLITSVELTGIFLKRLKRYGPVLESVVTITEELAYKQAKEADQLLAEGKYLGP
LHGIPYGLKDIIAVPNYTTTWGSTSFKVQVLDIEAWVYKRLKSAGAVLVAKLVTGSLAYD
DIWFGGRTRNPWNIEEYSTGSSAGPASCTSAGLVPFAIGSETSGSITYPASRCGVTALRP
TFGAVGRTGVMSIAESLDKLGPFCRNSVDCVVVLDAIRGKDPDDVSSRDISFGDPFSVDI
TKLTVGYLEDAEMEVVHVLQSKGVNMVPFNLSYTVDSVQGILNFTMDVEMLAHFDKWQRS
NLDDEYEAQDQWPIELRRARAISAVDYFQAQRARGILIQQVRESFSVDAFIGNATDWEKV
CVGNLVGFPVVVVPTGFKKISDAPSNDTRRRTTITTGIYAPPDRDHVALALAIAYQSVTN
HHKQRPPIDDLGPNDPIPESPKSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400036918
Transcript Infomation

pacid=37463610 locus=PGSC0003DMG400014230 ID=PGSC0003DMT400036918.v4.03 annot-version=v4.03
Sequence

ATGGCTTGTTACGCGGCGAGTGAAAAGGGCGGCGACGTGTTTTTCCCAATTCCGGCACGT
TCAGTTCGTCGGTCTTTGCGCTTGCCCATGTTCGTACTTGTATTTACTTTGTTGCTAAAT
AGCAGCTGTGTTTCTTCATACTCATCAGGATACTGGGATTTTACCTGCAACAATTCCACA
GATATGGAAAGAGGGAAGTTGGGTCCCCAAAACCCCGGTGTATGCTCAGGAAAGGCCACA
CATCTTCCAGTTTGTGAATGTGGATTCAAAATGTTGGACTCTTGCTTCTTGAATAAGAAC
AAGATGCTTGAAATCGAAAAGGGAGCAAATGACCTTAACATACCCATAATCAGATCCAAC
CGAAAGTTAGTTGCCTCTATTGATGGAGGTCTGCATAAACCGTCTTGTTTAGTCTTCAAT
TCTGCATGGAAGGCCCGACAACTAGAACATGAACCAAACAAAAAGCTCAATTATCCATCA
CCTGCTGGTATACAAAGACCAAAAAGTGACGAGGATATCGCATTCATGAGTATTCTTGAA
CTTGGTCAGCTTCTCAAGGCAAATTTAATCACATCAGTGGAGCTGACTGGAATTTTCTTG
AAGAGACTGAAGAGGTATGGTCCTGTTCTTGAATCGGTCGTTACAATTACTGAAGAATTA
GCATACAAACAAGCAAAAGAGGCTGATCAACTGCTTGCTGAAGGCAAATATTTAGGTCCT
CTTCATGGGATTCCTTATGGTCTGAAGGACATCATAGCAGTACCTAACTATACCACAACA
TGGGGTTCAACATCTTTTAAAGTCCAAGTTCTTGATATTGAAGCTTGGGTTTATAAGAGG
CTGAAATCTGCCGGGGCAGTTCTTGTTGCAAAGTTAGTAACTGGTTCTTTAGCATATGAT
GATATCTGGTTTGGTGGTAGAACAAGAAACCCGTGGAATATCGAGGAATATTCTACGGGA
TCATCAGCAGGTCCTGCTTCTTGCACCTCAGCAGGTTTGGTTCCATTTGCAATTGGTTCA
GAAACTTCCGGCTCTATTACCTATCCAGCTTCCCGCTGTGGCGTGACGGCACTGCGGCCC
ACTTTTGGAGCTGTCGGCCGAACGGGTGTTATGAGCATAGCTGAAAGCTTGGATAAATTA
GGCCCTTTTTGTAGAAACTCTGTGGATTGTGTGGTTGTTCTGGATGCCATTCGGGGAAAG
GACCCAGATGATGTTTCATCTAGAGACATATCCTTTGGAGATCCATTCTCAGTTGATATC
ACAAAGCTCACTGTTGGATATCTTGAGGACGCTGAGATGGAAGTCGTTCATGTACTTCAA
TCAAAAGGAGTGAATATGGTCCCATTTAACCTGAGTTACACTGTTGATTCTGTCCAAGGT
ATTCTCAATTTCACAATGGATGTTGAGATGCTGGCTCACTTCGATAAATGGCAGCGCTCA
AATCTGGATGATGAATATGAAGCTCAAGATCAATGGCCTATTGAACTTCGCCGAGCACGT
GCCATATCTGCAGTTGACTATTTTCAGGCACAAAGAGCTAGAGGTATATTGATTCAGCAA
GTAAGAGAAAGTTTCAGTGTTGATGCATTTATTGGAAATGCAACTGACTGGGAGAAAGTT
TGTGTTGGCAATCTAGTGGGTTTTCCAGTAGTAGTTGTTCCAACAGGATTCAAAAAGATA
TCTGATGCACCATCAAATGATACTCGCAGGAGAACAACAATAACTACAGGAATATATGCT
CCTCCAGACCGTGATCATGTCGCCCTAGCTTTAGCAATTGCTTATCAATCAGTCACCAAT
CATCATAAGCAGCGGCCACCAATTGATGACCTTGGGCCAAATGATCCTATTCCAGAATCA
CCAAAATCCCTGTAG