Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036907
CDS Infomation

pacid=37461843 polypeptide=PGSC0003DMP400025049 locus=PGSC0003DMG400014229 ID=PGSC0003DMT400036907.v4.03 annot-version=v4.03
Sequence

ATGGCATCAACAGGATGGTTGAAGGGAAGAGTGAAAGCTGTTCCCTCTGGTGACAGTTTG
GTGATAATGGGTAGTTCCAAGGCTGAAATCCCCCCTGAAAAATCTATAACCTTAGGATCT
CTAATGGCTCCACGTTTGGCACGTCGTGGTGGAGTGGATGAGCCATTTGCATGGCAAAGC
AGAGACTTCTTGAGGAAGCTTTGCATTGGAAAGGAAGTCACTTTCAAGGTGGAATATACT
GTACCTTCCATAGGGCGAGAATATGGAACTGTTTTTCTTGGTGACAAGAACGTTTCCATG
CTAGTTGTTGCTGCAGGCTGGGCCAAGGTCAGGGAGCAGGGTCAACAGAAAGATGCTAAT
CCCTATTTGAAACCACTGCAAGATGCTGAAGAACAAGCCAAACAACAAGGTCTAGGTCGT
TGGAGTAGGGCACCTGGTGCTTCTGAGGCGTCTATTAGGGATCTTCCTCCATCTGCAATT
GGTGATTCTAGTAACTTTGATGCAATGGGACTATTGGAGCGAAGTAAAGGCAAGCTTATT
GAAGCATTTGTTGAGCAGGTTCGTGATGGAAGTACGCTGCGAGTGTACTTGCTTCCAGAC
TTCCAGTTCATCCAAGTGTTCGTTGCTGGAATACAGGCACCAACAATGGGAAGAAGAGCA
ACATCAGAAACTGTTATTAATACTAGTGTTACTTCTGATGAACCAAATGGAGAATCAACT
ACTGAACAACGTGCAGCTCCGACATCAGCGCAGAGGTTGGCATCCTCAGCTGCATCTGTA
ATAGAAGTTGCACCTGATCCTTATGGCAGAGAAGCAAAGCATTTTACCGAAACTCGTGTC
TTAAATAGAGATGTTCGAATTGTCCTGGAGGGTGTTGACAAGTATAGCAATCTAATTGGC
TCAGTGTATTACCCTGATGGAGAATCGGCAAAGGACCTGGGATTGGAGCTTATTGAAAAT
GGTTATGCTAAATATGTTGATTGGAGTGCAAACATGCTGGAAGTTGAAGCCAAGAAGAAG
CTGAAAAGTGCCGAGCTTGAGGCCAAAAAAACTCGCTTAAGAATCTGGACAAACTATGTA
GCTCCAGCAACAAATTCCAAGGCTATTCATGACCAAAATTTCACGGGAAAGGTCGTTGAG
GTTGTCAACGGAGATTGTCTTGTTATAGCTGATGATTCTCTGCCATTTGGAGATCCATCA
GCAGAACGAAGAGTCAATCTTTCAAGTATTAGGTCTCCTAAAATGGGAAATCCTCGTAGA
GAAGAGAAGCCTGCTCCCTATGCTCGTGAAGCAAAGGAGTTTTTGAGAAATCGCCTTATC
GGAAAACAGGTGCATGTTTCCATGGAGTACTCACGGAAGGTCGGAATGGCAGATGGACCT
GCTGCTCCCACCAGTGGTGCAGATTCAAGGGTGATGGATTTTGGAACTGTATTCCTGGCA
TCCAAAGATGGGGATGATGCATCACCTGCTCCATCTGCTGCAGGCAACCAGTTGGCTGGA
GTCAATGTTGCTGAGCTTTTGGTTGCCCGCGGTTTCGCAACTGTTGTTAGACATCGTGAT
TTTGAAGAACGTTCAAACTATTATGATGCCCTTCTCTCCGCAGAATCACGTGCTACTTCT
GGGAAAAAGGGTATTCATTCTCCTAAAGAAGCTCCAGTGATGCATGTAACAGACCTGCTA
ACGGCAGCGTCAAAGAAAGCTAGAGACTTTTTGCCTTTCTTGCAACGTAACAGGAGGATG
TCTGCTGTTGTAGAATATGTCCTCAGTGGTCATAGATTCAAACTGTTCATTCCCAAGGAG
ACTTGCAGCATTGCTTTCTCTATTTCTGGAGTGAGATGCCCAGGTCGTGATGAGCCCTAC
TCTGAGGAAGCCATTGCCTTGATGAGGCGGAAGATAATGCAGAGGGATGTTGAGATCGAG
GTAGAAACAGTTGACAGAACAGGGACTTTCATTGGAACATTATGGGAATCAAGATCCAAT
GTGGCGGTGACTCTACTGGAAGCTGGTTTAGCAAAGCTTCAAACTTCTTTTGGAACTGAT
AGAATCGCCGAAGTTCACCTCCTCATGCAAGCTGAACAGGCCGCCAAAAGGCAGAAATTG
AAGATATGGGAGAATTATGTCGAGGGAGAGGAAGTTGTCAGTAGTGGAACAGCTGAAAGA
CGCCAAAAAGAAGAGGTGAAGGTCACAGTCACTGAAATTCTGGGTGGGGGTAAATTTTAC
GTTCAGTTGGTTTCCGACCAGAAAGTAGCCGCCATTCAGAAGCAACTTGCTTCTCTAAAT
CTTCAGGAGGCTCCTGTCATTGGTGCATTTAATCCAAAGAAGGGTGATATGGTTCTTGCT
CAATTCAGTGCTGATAATTCATGGAACCGAGCAATGATTGTCAATGCCCCTCGTGGTGCT
GTGGAATCTTCCAAAGACAAGTTTGAAGTTTTCTATGTTGATTATGGAAACCAAGAAGTT
GTTTCATACAGTCAGTTGCGGCCTCTTGAAGCATCTGTGTCCTCCAGTCCTGGTCTTGCT
CAGCTCTGCAGTCTTGCTTATGTTAAAGTTCCTGGGCTAGAAGATGATTATGGTCAGGAG
GCAGCATACCGGCTCAGTGAGCTTCTTCTAAGTGGGCCAAAGGAATTTAGAGCTGTTATT
GAGGAGAAAGATGCTTCAGGTGGAAAAGTTAAAGGTCAAGGAACAGGAACAGTCTTTCTG
GTGACTTTGGTTGATCCTGAAAGTGATATCAGCATAAATGCTACCTTGCTTAAGGAAGGA
CTTGCTAGGATGGAGAAAAGGAAGAGGTGGGAGCCCAAGGACAAACAACAGGCTCTGGAT
GAATTGGAGAAGTATCAAACAGAAGCACGAGAAAAGAGGTTCGCGATGTGGGAGTATGGA
GATGTCGAGTCAGATGAGGAGGATATCCCTGCTAGGAAACCTGCTGGGAAACGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025049
PEP Infomation

pacid=37461843 transcript=PGSC0003DMT400036907 locus=PGSC0003DMG400014229 ID=PGSC0003DMT400036907.v4.03 annot-version=v4.03
Sequence

MASTGWLKGRVKAVPSGDSLVIMGSSKAEIPPEKSITLGSLMAPRLARRGGVDEPFAWQS
RDFLRKLCIGKEVTFKVEYTVPSIGREYGTVFLGDKNVSMLVVAAGWAKVREQGQQKDAN
PYLKPLQDAEEQAKQQGLGRWSRAPGASEASIRDLPPSAIGDSSNFDAMGLLERSKGKLI
EAFVEQVRDGSTLRVYLLPDFQFIQVFVAGIQAPTMGRRATSETVINTSVTSDEPNGEST
TEQRAAPTSAQRLASSAASVIEVAPDPYGREAKHFTETRVLNRDVRIVLEGVDKYSNLIG
SVYYPDGESAKDLGLELIENGYAKYVDWSANMLEVEAKKKLKSAELEAKKTRLRIWTNYV
APATNSKAIHDQNFTGKVVEVVNGDCLVIADDSLPFGDPSAERRVNLSSIRSPKMGNPRR
EEKPAPYAREAKEFLRNRLIGKQVHVSMEYSRKVGMADGPAAPTSGADSRVMDFGTVFLA
SKDGDDASPAPSAAGNQLAGVNVAELLVARGFATVVRHRDFEERSNYYDALLSAESRATS
GKKGIHSPKEAPVMHVTDLLTAASKKARDFLPFLQRNRRMSAVVEYVLSGHRFKLFIPKE
TCSIAFSISGVRCPGRDEPYSEEAIALMRRKIMQRDVEIEVETVDRTGTFIGTLWESRSN
VAVTLLEAGLAKLQTSFGTDRIAEVHLLMQAEQAAKRQKLKIWENYVEGEEVVSSGTAER
RQKEEVKVTVTEILGGGKFYVQLVSDQKVAAIQKQLASLNLQEAPVIGAFNPKKGDMVLA
QFSADNSWNRAMIVNAPRGAVESSKDKFEVFYVDYGNQEVVSYSQLRPLEASVSSSPGLA
QLCSLAYVKVPGLEDDYGQEAAYRLSELLLSGPKEFRAVIEEKDASGGKVKGQGTGTVFL
VTLVDPESDISINATLLKEGLARMEKRKRWEPKDKQQALDELEKYQTEAREKRFAMWEYG
DVESDEEDIPARKPAGKR*

Transcript Sequence

Transcript ID

PGSC0003DMT400036907
Transcript Infomation

pacid=37461843 locus=PGSC0003DMG400014229 ID=PGSC0003DMT400036907.v4.03 annot-version=v4.03
Sequence

ATGGCATCAACAGGATGGTTGAAGGGAAGAGTGAAAGCTGTTCCCTCTGGTGACAGTTTG
GTGATAATGGGTAGTTCCAAGGCTGAAATCCCCCCTGAAAAATCTATAACCTTAGGATCT
CTAATGGCTCCACGTTTGGCACGTCGTGGTGGAGTGGATGAGCCATTTGCATGGCAAAGC
AGAGACTTCTTGAGGAAGCTTTGCATTGGAAAGGAAGTCACTTTCAAGGTGGAATATACT
GTACCTTCCATAGGGCGAGAATATGGAACTGTTTTTCTTGGTGACAAGAACGTTTCCATG
CTAGTTGTTGCTGCAGGCTGGGCCAAGGTCAGGGAGCAGGGTCAACAGAAAGATGCTAAT
CCCTATTTGAAACCACTGCAAGATGCTGAAGAACAAGCCAAACAACAAGGTCTAGGTCGT
TGGAGTAGGGCACCTGGTGCTTCTGAGGCGTCTATTAGGGATCTTCCTCCATCTGCAATT
GGTGATTCTAGTAACTTTGATGCAATGGGACTATTGGAGCGAAGTAAAGGCAAGCTTATT
GAAGCATTTGTTGAGCAGGTTCGTGATGGAAGTACGCTGCGAGTGTACTTGCTTCCAGAC
TTCCAGTTCATCCAAGTGTTCGTTGCTGGAATACAGGCACCAACAATGGGAAGAAGAGCA
ACATCAGAAACTGTTATTAATACTAGTGTTACTTCTGATGAACCAAATGGAGAATCAACT
ACTGAACAACGTGCAGCTCCGACATCAGCGCAGAGGTTGGCATCCTCAGCTGCATCTGTA
ATAGAAGTTGCACCTGATCCTTATGGCAGAGAAGCAAAGCATTTTACCGAAACTCGTGTC
TTAAATAGAGATGTTCGAATTGTCCTGGAGGGTGTTGACAAGTATAGCAATCTAATTGGC
TCAGTGTATTACCCTGATGGAGAATCGGCAAAGGACCTGGGATTGGAGCTTATTGAAAAT
GGTTATGCTAAATATGTTGATTGGAGTGCAAACATGCTGGAAGTTGAAGCCAAGAAGAAG
CTGAAAAGTGCCGAGCTTGAGGCCAAAAAAACTCGCTTAAGAATCTGGACAAACTATGTA
GCTCCAGCAACAAATTCCAAGGCTATTCATGACCAAAATTTCACGGGAAAGGTCGTTGAG
GTTGTCAACGGAGATTGTCTTGTTATAGCTGATGATTCTCTGCCATTTGGAGATCCATCA
GCAGAACGAAGAGTCAATCTTTCAAGTATTAGGTCTCCTAAAATGGGAAATCCTCGTAGA
GAAGAGAAGCCTGCTCCCTATGCTCGTGAAGCAAAGGAGTTTTTGAGAAATCGCCTTATC
GGAAAACAGGTGCATGTTTCCATGGAGTACTCACGGAAGGTCGGAATGGCAGATGGACCT
GCTGCTCCCACCAGTGGTGCAGATTCAAGGGTGATGGATTTTGGAACTGTATTCCTGGCA
TCCAAAGATGGGGATGATGCATCACCTGCTCCATCTGCTGCAGGCAACCAGTTGGCTGGA
GTCAATGTTGCTGAGCTTTTGGTTGCCCGCGGTTTCGCAACTGTTGTTAGACATCGTGAT
TTTGAAGAACGTTCAAACTATTATGATGCCCTTCTCTCCGCAGAATCACGTGCTACTTCT
GGGAAAAAGGGTATTCATTCTCCTAAAGAAGCTCCAGTGATGCATGTAACAGACCTGCTA
ACGGCAGCGTCAAAGAAAGCTAGAGACTTTTTGCCTTTCTTGCAACGTAACAGGAGGATG
TCTGCTGTTGTAGAATATGTCCTCAGTGGTCATAGATTCAAACTGTTCATTCCCAAGGAG
ACTTGCAGCATTGCTTTCTCTATTTCTGGAGTGAGATGCCCAGGTCGTGATGAGCCCTAC
TCTGAGGAAGCCATTGCCTTGATGAGGCGGAAGATAATGCAGAGGGATGTTGAGATCGAG
GTAGAAACAGTTGACAGAACAGGGACTTTCATTGGAACATTATGGGAATCAAGATCCAAT
GTGGCGGTGACTCTACTGGAAGCTGGTTTAGCAAAGCTTCAAACTTCTTTTGGAACTGAT
AGAATCGCCGAAGTTCACCTCCTCATGCAAGCTGAACAGGCCGCCAAAAGGCAGAAATTG
AAGATATGGGAGAATTATGTCGAGGGAGAGGAAGTTGTCAGTAGTGGAACAGCTGAAAGA
CGCCAAAAAGAAGAGGTGAAGGTCACAGTCACTGAAATTCTGGGTGGGGGTAAATTTTAC
GTTCAGTTGGTTTCCGACCAGAAAGTAGCCGCCATTCAGAAGCAACTTGCTTCTCTAAAT
CTTCAGGAGGCTCCTGTCATTGGTGCATTTAATCCAAAGAAGGGTGATATGGTTCTTGCT
CAATTCAGTGCTGATAATTCATGGAACCGAGCAATGATTGTCAATGCCCCTCGTGGTGCT
GTGGAATCTTCCAAAGACAAGTTTGAAGTTTTCTATGTTGATTATGGAAACCAAGAAGTT
GTTTCATACAGTCAGTTGCGGCCTCTTGAAGCATCTGTGTCCTCCAGTCCTGGTCTTGCT
CAGCTCTGCAGTCTTGCTTATGTTAAAGTTCCTGGGCTAGAAGATGATTATGGTCAGGAG
GCAGCATACCGGCTCAGTGAGCTTCTTCTAAGTGGGCCAAAGGAATTTAGAGCTGTTATT
GAGGAGAAAGATGCTTCAGGTGGAAAAGTTAAAGGTCAAGGAACAGGAACAGTCTTTCTG
GTGACTTTGGTTGATCCTGAAAGTGATATCAGCATAAATGCTACCTTGCTTAAGGAAGGA
CTTGCTAGGATGGAGAAAAGGAAGAGGTGGGAGCCCAAGGACAAACAACAGGCTCTGGAT
GAATTGGAGAAGTATCAAACAGAAGCACGAGAAAAGAGGTTCGCGATGTGGGAGTATGGA
GATGTCGAGTCAGATGAGGAGGATATCCCTGCTAGGAAACCTGCTGGGAAACGGTGA