Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036874
CDS Infomation

pacid=37459804 polypeptide=PGSC0003DMP400025019 locus=PGSC0003DMG402014218 ID=PGSC0003DMT400036874.v4.03 annot-version=v4.03
Sequence

ATGGACAAGAAGAAGTATCCAATTGGACCGGAGCATTACACGCTTTTCGAGGAGGTAGGG
CAAGGAGTCAGTGCTTCGGTTCATCGTGCCTTATGTATTTCTCTCAATGAAGTTGTTGCC
ATCAAAATCCTCGATTTCGAACGCGATAATTCCGATTTGAATAACATCTCGCGTGAAGCA
CAAACAATGGTCCTAGTTGATCATCCCAATGTTCTTAAATCACATTGCTCATTTGTTAGT
GATCACAACCTATGGGTTATCATGCCTTACATGGCTGGAGGTTCCTGTCTCCACATACTG
AAGGCTACTCATCCAGATGGCTTCGAAGAGACCGTCATTGCAACAGTATTACGGGAAGTT
CTAAAGGGTTTAGAATATCTTCATCATCATGGCTTCATCCATCGTGATGTTAAAGCTGGA
AATATTCTCATTGATTCACGAGGTGGAATAAAGTTGGGAGATTTTGGTGTCTCTGCTTAT
TTATTTGATTCAGGTGATAGGCAACGTATGCGGAACACATTTGTTGGAACTCCTTGTTGG
ATGGCACCGGAGGTCATGGAGCAGTTGCATGGTTATGATTTCAAAGCTGATATTTGGTCC
TTTGGCATAACTGCATTGGAACTTGCTCACGGCCATGCTCCTTTCTCAAAATATCCTCCA
ATGAAGGTCTTACTAATGACATTGCAAAATGCACCCCCTGGCCTTGATTACGAGAGAGAT
AAGAAGTTTTCAAAGTCTTTTAAGCAAATGATTGCTAGTTGCTTGGTGAAAGATCCTTCA
AAACGACCTTCAGCCAAAAAATTGCTGAAGCATCCGTTCTTTAAGCAAGCAAGGTCCAAT
GATTATATAGGTAGAACACTGTTGGAGGGTTTGCCAGCACTTGGAGATCGCATGAAGGCA
TTGAAGAGGAAAGAAGAAGACATGCTAGCACAAAAGAAGATACCAGATGGGCAGAAAGAA
GAAATATCACAGAATGAATATAAACGGGGGATTAGCAGCTGGAATTTTAACCTTGAAGAT
TTGAAGGCACAGGCTACCTTGATTCCAGATGAGGAGATCCTTGGTGACAAGGACCTAGGT
GGGAGTTCGAATTCGCTGTCTGGGCTTGACATTCCAGGGAAACAGCTAAATAAGTTTCAG
CATCAGTTCTCCTTCTCAAGTCAATATTCAGATGCTACTGAATTTGACAGTAACAATCCA
TCTGCCCCTCCTTCACCTGCCACCCAGAATGTGGCTTATAACATAACTAAATGTGAGAAA
TCTGATGATGATTTAAGCATTGCCGGTTCATTTCATGATCCTCAACTTTCACAAAATTCT
TCACCATGCTATGACAATCGCATGGAATTGAATTTGGTGGGAAAAGGTGAACAAGTGGCT
GATGCAAAGTTATTCGAGGGCATGCCTGTAAATTCTCGCCAGAGTGATAAAAGTCAATTC
CAAAATGTATCCAGTTGCAATGGGACTTCGGTTCTTCAAACAATAGATGATGTACCAACT
GAAGTAATCAGTAAACATTGTAGAACCTCAGCTAGCAGTGAAGATTTTGATGAGAAGACT
AAGGGTCATGTTGTTCAGCAAAGAGGACGTTTCAAAGTTACGTCAGAGAATGTCGACTTG
GAAAAGGTAGGTGCATCTCCAATGCTACACAAGAGTCAGAGCTTGCTGGTGATGCCACAA
ACTCTTGCTGCTGCTCAACCATTACCACTTGATGCTACACCACCAAATCTTCTTACACCA
TCCCATTTTCCAGCGTTGCAGAGTATTTTAGAGGCAAATATTCTTCAAAGGGAAAGTATT
CTTAGATTGATGAGGCAAGTGGCCCTTGGAGACACTGCGGTGGATGCTGGATGCATGCCA
TTAAATTCGCTTGGTGTGGAGAAATCGCTGTTGGAGGTTGCTCATGACAAAGAGAAGGAA
TTAATTAGTGAAAACACTGAATTGCAGTGGAGGTTGATACGTGCTCAAGAAGAACTTCAA
AAATACAAAGCAGAAAACGCTCAAAATAACTCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400025019
PEP Infomation

pacid=37459804 transcript=PGSC0003DMT400036874 locus=PGSC0003DMG402014218 ID=PGSC0003DMT400036874.v4.03 annot-version=v4.03
Sequence

MDKKKYPIGPEHYTLFEEVGQGVSASVHRALCISLNEVVAIKILDFERDNSDLNNISREA
QTMVLVDHPNVLKSHCSFVSDHNLWVIMPYMAGGSCLHILKATHPDGFEETVIATVLREV
LKGLEYLHHHGFIHRDVKAGNILIDSRGGIKLGDFGVSAYLFDSGDRQRMRNTFVGTPCW
MAPEVMEQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERD
KKFSKSFKQMIASCLVKDPSKRPSAKKLLKHPFFKQARSNDYIGRTLLEGLPALGDRMKA
LKRKEEDMLAQKKIPDGQKEEISQNEYKRGISSWNFNLEDLKAQATLIPDEEILGDKDLG
GSSNSLSGLDIPGKQLNKFQHQFSFSSQYSDATEFDSNNPSAPPSPATQNVAYNITKCEK
SDDDLSIAGSFHDPQLSQNSSPCYDNRMELNLVGKGEQVADAKLFEGMPVNSRQSDKSQF
QNVSSCNGTSVLQTIDDVPTEVISKHCRTSASSEDFDEKTKGHVVQQRGRFKVTSENVDL
EKVGASPMLHKSQSLLVMPQTLAAAQPLPLDATPPNLLTPSHFPALQSILEANILQRESI
LRLMRQVALGDTAVDAGCMPLNSLGVEKSLLEVAHDKEKELISENTELQWRLIRAQEELQ
KYKAENAQNNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400036874
Transcript Infomation

pacid=37459804 locus=PGSC0003DMG402014218 ID=PGSC0003DMT400036874.v4.03 annot-version=v4.03
Sequence

ATGGACAAGAAGAAGTATCCAATTGGACCGGAGCATTACACGCTTTTCGAGGAGGTAGGG
CAAGGAGTCAGTGCTTCGGTTCATCGTGCCTTATGTATTTCTCTCAATGAAGTTGTTGCC
ATCAAAATCCTCGATTTCGAACGCGATAATTCCGATTTGAATAACATCTCGCGTGAAGCA
CAAACAATGGTCCTAGTTGATCATCCCAATGTTCTTAAATCACATTGCTCATTTGTTAGT
GATCACAACCTATGGGTTATCATGCCTTACATGGCTGGAGGTTCCTGTCTCCACATACTG
AAGGCTACTCATCCAGATGGCTTCGAAGAGACCGTCATTGCAACAGTATTACGGGAAGTT
CTAAAGGGTTTAGAATATCTTCATCATCATGGCTTCATCCATCGTGATGTTAAAGCTGGA
AATATTCTCATTGATTCACGAGGTGGAATAAAGTTGGGAGATTTTGGTGTCTCTGCTTAT
TTATTTGATTCAGGTGATAGGCAACGTATGCGGAACACATTTGTTGGAACTCCTTGTTGG
ATGGCACCGGAGGTCATGGAGCAGTTGCATGGTTATGATTTCAAAGCTGATATTTGGTCC
TTTGGCATAACTGCATTGGAACTTGCTCACGGCCATGCTCCTTTCTCAAAATATCCTCCA
ATGAAGGTCTTACTAATGACATTGCAAAATGCACCCCCTGGCCTTGATTACGAGAGAGAT
AAGAAGTTTTCAAAGTCTTTTAAGCAAATGATTGCTAGTTGCTTGGTGAAAGATCCTTCA
AAACGACCTTCAGCCAAAAAATTGCTGAAGCATCCGTTCTTTAAGCAAGCAAGGTCCAAT
GATTATATAGGTAGAACACTGTTGGAGGGTTTGCCAGCACTTGGAGATCGCATGAAGGCA
TTGAAGAGGAAAGAAGAAGACATGCTAGCACAAAAGAAGATACCAGATGGGCAGAAAGAA
GAAATATCACAGAATGAATATAAACGGGGGATTAGCAGCTGGAATTTTAACCTTGAAGAT
TTGAAGGCACAGGCTACCTTGATTCCAGATGAGGAGATCCTTGGTGACAAGGACCTAGGT
GGGAGTTCGAATTCGCTGTCTGGGCTTGACATTCCAGGGAAACAGCTAAATAAGTTTCAG
CATCAGTTCTCCTTCTCAAGTCAATATTCAGATGCTACTGAATTTGACAGTAACAATCCA
TCTGCCCCTCCTTCACCTGCCACCCAGAATGTGGCTTATAACATAACTAAATGTGAGAAA
TCTGATGATGATTTAAGCATTGCCGGTTCATTTCATGATCCTCAACTTTCACAAAATTCT
TCACCATGCTATGACAATCGCATGGAATTGAATTTGGTGGGAAAAGGTGAACAAGTGGCT
GATGCAAAGTTATTCGAGGGCATGCCTGTAAATTCTCGCCAGAGTGATAAAAGTCAATTC
CAAAATGTATCCAGTTGCAATGGGACTTCGGTTCTTCAAACAATAGATGATGTACCAACT
GAAGTAATCAGTAAACATTGTAGAACCTCAGCTAGCAGTGAAGATTTTGATGAGAAGACT
AAGGGTCATGTTGTTCAGCAAAGAGGACGTTTCAAAGTTACGTCAGAGAATGTCGACTTG
GAAAAGGTAGGTGCATCTCCAATGCTACACAAGAGTCAGAGCTTGCTGGTGATGCCACAA
ACTCTTGCTGCTGCTCAACCATTACCACTTGATGCTACACCACCAAATCTTCTTACACCA
TCCCATTTTCCAGCGTTGCAGAGTATTTTAGAGGCAAATATTCTTCAAAGGGAAAGTATT
CTTAGATTGATGAGGCAAGTGGCCCTTGGAGACACTGCGGTGGATGCTGGATGCATGCCA
TTAAATTCGCTTGGTGTGGAGAAATCGCTGTTGGAGGTTGCTCATGACAAAGAGAAGGAA
TTAATTAGTGAAAACACTGAATTGCAGTGGAGGTTGATACGTGCTCAAGAAGAACTTCAA
AAATACAAAGCAGAAAACGCTCAAAATAACTCTTGA