Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036856
CDS Infomation

pacid=37462430 polypeptide=PGSC0003DMP400025002 locus=PGSC0003DMG400014212 ID=PGSC0003DMT400036856.v4.03 annot-version=v4.03
Sequence

ATGGCGAAATCTGAAGGCAAAGCTATTGGCATTGATCTCGGCACGACTTACAGTTGTGTT
GGGGTCTGGCAAAATGATCGTGTAGAGATAATCCCAAATGATCAAGGCAACAGGACTACT
CCATCCTACGTTGCTTTCACTGATACAGAGCGGTTAATCGGCGATGCAGCCAAGAATCAG
GTAGCGATGAACCCCCAAAACACTGTTTTCGATGCTAAACGTTTAATTGGTAGGAGATTT
TCCGACCCTTCTGTTCAGAGTGACATGAAGCATTGGCCGTTTAAGGTAGTTCCGGGTCCT
GGTGAAAAACCCATGATTGTGGTTCAGTATAAGGGGGAAGAGAAACAGTTTTCTCCTGAG
GAGATTTCGTCTATGGTTTTGACGAAAATGAAGGAAGTGGCGGAAGCTTTCTTGGGGACT
ACTGTAAAGAACGCTGTGGTTACTGTTCCTGCTTATTTCAATGATTCTCAAAGGCAGGCT
ACTAAAGATGCAGGGGCTATTTCTGGGCTTAATGTTATGAGGATTATTAATGAGCCTACT
GCTGCTGCAATTGCGTATGGTTTGGATAAAAAATCGTCGAGTAGTGGTGAAAAGAATGTG
TTGATCTTTGATCTTGGTGGTGGAACTTTTGATGTTTCGTTGTTGACTATTGAAGAAGGG
ATTTTTGAAGTTAAGGCTACTGCAGGAGATACACATTTGGGTGGTGAAGATTTTGACAAT
AGGCTTGTCAATCATTTTGTGCAGGAGTTTAAAAGGAAGCATAAGAAGGATATTAGTGGC
AATCCCAGGGCTCTAAGGCGGTTGAGAACCGCATGTGAGAGGGCGAAGAGGACTTTGTCA
TCGACTGCTCAGACGACTATTGAGATCGATTCCTTGTATGAAGGGATTGATTTCTATGCT
ACAATTACCAGGGCAAGATTTGAGGAGATGAACATGGATCTTTTCAGGAAGTGTATGGAA
CCTGTGGAGAAGTGTTTAAAGGATGCCAAGATTGACAAGGGTCATATTCATGATGTGGTT
CTTGTTGGTGGCTCTACTAGGATCCCAAAAGTTCAGCAATTATTGCAAGATTTTTTCAAT
GGTAAGGAGCTTTGCAAGAGTATTAACCCTGATGAGGCTGTGGCTTATGGTGCTGCTGTT
CAAGCTGCAATTTTGACTGGAGAAGGTGATCAGAAAGTTCAAGATTTATTGCTTCTTGAT
GTCACACCTCTCAGTCTTGGTCTTGAAACTGCTGGTGGTGTGATGACAGTGTTGATTCCA
AGAAACACTACAATTCCAACGAAGAAAGAACAGATCTTTTCGACCTACCAGGACAATCAA
CCAGGTGTGCTCATTCAGGTGTATGAAGGAGAGAGGCCTATGACTAAAGACAACAACCTT
CTTGGGAAATTTGAGCTCAAGGGTATTCCTCCAGCACCAAGAGGAGTGCCTCAGATCAAT
GTCTGTTTTGACATTGATGCTAATGGCATTCTCAACGTGTCGGCTGAGGACAAGACTGCT
GGTGTGAAGAACAAGATCACAATTACAAATGATAAAGGTAGATTAAGCAAGGAAGACATT
GAGAGGATGGTTCAAGAGGCTGAGAGGTACAAGGAAGAGGATGAGTCCATGAAGAAAAAA
GTTGAGGCGAAGAACGCGTTGGAGAATTATGCTTACAACATGAGGAATACAGTGAGGGAT
GAGAAATTCTCAGGGAAATTGGATCCATCTGACAAACAGAAGATTGAGAAGGCCGTCGAT
GAGACAATTGAATGGTTGGATGGAAACCAATTGGCTGAAGTAGATGAATTTGAGGATAAA
TTGAAGGAGTTGGAGAACTTGTGCAATCCAATAATTTCAAAGATGTACCAAGGTGGTGCT
GGTGGAGATATGCCCATGGGAGGCAGTGCTGACACTGGAGCTGGTTATGGCCAAGGAGGA
TCTGCAGCTAATGGTCCAGGGCCAAAGATTGAGGAAGTTGATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400025002
PEP Infomation

pacid=37462430 transcript=PGSC0003DMT400036856 locus=PGSC0003DMG400014212 ID=PGSC0003DMT400036856.v4.03 annot-version=v4.03
Sequence

MAKSEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPQNTVFDAKRLIGRRFSDPSVQSDMKHWPFKVVPGPGEKPMIVVQYKGEEKQFSPE
EISSMVLTKMKEVAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGAISGLNVMRIINEPT
AAAIAYGLDKKSSSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN
RLVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYA
TITRARFEEMNMDLFRKCMEPVEKCLKDAKIDKGHIHDVVLVGGSTRIPKVQQLLQDFFN
GKELCKSINPDEAVAYGAAVQAAILTGEGDQKVQDLLLLDVTPLSLGLETAGGVMTVLIP
RNTTIPTKKEQIFSTYQDNQPGVLIQVYEGERPMTKDNNLLGKFELKGIPPAPRGVPQIN
VCFDIDANGILNVSAEDKTAGVKNKITITNDKGRLSKEDIERMVQEAERYKEEDESMKKK
VEAKNALENYAYNMRNTVRDEKFSGKLDPSDKQKIEKAVDETIEWLDGNQLAEVDEFEDK
LKELENLCNPIISKMYQGGAGGDMPMGGSADTGAGYGQGGSAANGPGPKIEEVD*

Transcript Sequence

Transcript ID

PGSC0003DMT400036856
Transcript Infomation

pacid=37462430 locus=PGSC0003DMG400014212 ID=PGSC0003DMT400036856.v4.03 annot-version=v4.03
Sequence

ATGGCGAAATCTGAAGGCAAAGCTATTGGCATTGATCTCGGCACGACTTACAGTTGTGTT
GGGGTCTGGCAAAATGATCGTGTAGAGATAATCCCAAATGATCAAGGCAACAGGACTACT
CCATCCTACGTTGCTTTCACTGATACAGAGCGGTTAATCGGCGATGCAGCCAAGAATCAG
GTAGCGATGAACCCCCAAAACACTGTTTTCGATGCTAAACGTTTAATTGGTAGGAGATTT
TCCGACCCTTCTGTTCAGAGTGACATGAAGCATTGGCCGTTTAAGGTAGTTCCGGGTCCT
GGTGAAAAACCCATGATTGTGGTTCAGTATAAGGGGGAAGAGAAACAGTTTTCTCCTGAG
GAGATTTCGTCTATGGTTTTGACGAAAATGAAGGAAGTGGCGGAAGCTTTCTTGGGGACT
ACTGTAAAGAACGCTGTGGTTACTGTTCCTGCTTATTTCAATGATTCTCAAAGGCAGGCT
ACTAAAGATGCAGGGGCTATTTCTGGGCTTAATGTTATGAGGATTATTAATGAGCCTACT
GCTGCTGCAATTGCGTATGGTTTGGATAAAAAATCGTCGAGTAGTGGTGAAAAGAATGTG
TTGATCTTTGATCTTGGTGGTGGAACTTTTGATGTTTCGTTGTTGACTATTGAAGAAGGG
ATTTTTGAAGTTAAGGCTACTGCAGGAGATACACATTTGGGTGGTGAAGATTTTGACAAT
AGGCTTGTCAATCATTTTGTGCAGGAGTTTAAAAGGAAGCATAAGAAGGATATTAGTGGC
AATCCCAGGGCTCTAAGGCGGTTGAGAACCGCATGTGAGAGGGCGAAGAGGACTTTGTCA
TCGACTGCTCAGACGACTATTGAGATCGATTCCTTGTATGAAGGGATTGATTTCTATGCT
ACAATTACCAGGGCAAGATTTGAGGAGATGAACATGGATCTTTTCAGGAAGTGTATGGAA
CCTGTGGAGAAGTGTTTAAAGGATGCCAAGATTGACAAGGGTCATATTCATGATGTGGTT
CTTGTTGGTGGCTCTACTAGGATCCCAAAAGTTCAGCAATTATTGCAAGATTTTTTCAAT
GGTAAGGAGCTTTGCAAGAGTATTAACCCTGATGAGGCTGTGGCTTATGGTGCTGCTGTT
CAAGCTGCAATTTTGACTGGAGAAGGTGATCAGAAAGTTCAAGATTTATTGCTTCTTGAT
GTCACACCTCTCAGTCTTGGTCTTGAAACTGCTGGTGGTGTGATGACAGTGTTGATTCCA
AGAAACACTACAATTCCAACGAAGAAAGAACAGATCTTTTCGACCTACCAGGACAATCAA
CCAGGTGTGCTCATTCAGGTGTATGAAGGAGAGAGGCCTATGACTAAAGACAACAACCTT
CTTGGGAAATTTGAGCTCAAGGGTATTCCTCCAGCACCAAGAGGAGTGCCTCAGATCAAT
GTCTGTTTTGACATTGATGCTAATGGCATTCTCAACGTGTCGGCTGAGGACAAGACTGCT
GGTGTGAAGAACAAGATCACAATTACAAATGATAAAGGTAGATTAAGCAAGGAAGACATT
GAGAGGATGGTTCAAGAGGCTGAGAGGTACAAGGAAGAGGATGAGTCCATGAAGAAAAAA
GTTGAGGCGAAGAACGCGTTGGAGAATTATGCTTACAACATGAGGAATACAGTGAGGGAT
GAGAAATTCTCAGGGAAATTGGATCCATCTGACAAACAGAAGATTGAGAAGGCCGTCGAT
GAGACAATTGAATGGTTGGATGGAAACCAATTGGCTGAAGTAGATGAATTTGAGGATAAA
TTGAAGGAGTTGGAGAACTTGTGCAATCCAATAATTTCAAAGATGTACCAAGGTGGTGCT
GGTGGAGATATGCCCATGGGAGGCAGTGCTGACACTGGAGCTGGTTATGGCCAAGGAGGA
TCTGCAGCTAATGGTCCAGGGCCAAAGATTGAGGAAGTTGATTAA