Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036850
CDS Infomation

pacid=37462352 polypeptide=PGSC0003DMP400024996 locus=PGSC0003DMG400014209 ID=PGSC0003DMT400036850.v4.03 annot-version=v4.03
Sequence

ATGCGGTTGCTCTCTCTTGCACGAAGGCTCTACAGTGCTCGTCCCATCGCTTTTAAGCAT
ATAATCGACTATCAGCATCCTTCATTGTTTTCCGCCCAGTTGGAAATAAGGTGTCATTTC
TTTGGGGCATTTCGTCAACCATCTGTCAGGCACTGTTCTACTATACCGCCCAAGCTCCCT
TTCTTTAGCTCCGGCAATTCCACTAGCTACGAAATCATCAACTTCGATAAGTGTGTGGAT
ACATTGCGTGAAAAGTATCATGACGGTGTTAATGAATTTGTTGGGATTGCACAAAAGGCC
AGTGATTTTGGTTCTGGAGATGAAGCCATATTGTTTCTTGATGAATGCGGGGTTAAACCG
AACCAAGAATTGGTCTTTTTGGTGATTTGGGAGTTGAGAGATCAGTGGAAGTTAGCTTAT
TTGCTATTCAAATGGGGTGAGAAATGCAAATGTCTTGAAGAAAATACGTGGTGTTTGATG
ATATGGATTCTGGGCAACCATAGTAAATTCAGTACTGCTTGGTCTTTGATCCGAGATCTT
CTTCAGATGTCAACAGATATTCAAGAAGCTGTCCTCATCATGATTGATAGATATGCTGCT
GCCAATAATGCTGGTAAAGCTATACAGACATTCCAGATTTTGGAGAAATTTAGTATGTCT
CCTGATCAGAGAACATTATTGACATTCTTGAATATTCTCTGTAAGCATGGTTTTATTGAA
GAGGCTGAAGAATTCATGCTTATCAATAAGAAGCTATTCCCCTTGGAAATTGATGGCTTT
AATATTATTCTCAATGGATGGTGTAATATAGTGGTTGATATATTTGAAGCCAAAAGAGTA
TGGCGAGAAATGTCCAAGTGTTGTATTGAACCAAATGGTACTTCATATTCCCACATGATT
TCCTGCTTCTCCAAGGTTAGAAATTTGTTTGATTCACTAAGACTTTATGATGAAATGCAG
AAACGGGGCTGGGTTCCAGGCATGCAGGTGTATAATGCTTTGGTATATGTACTGACTTGT
GAGAATTGTGTGAAGGAATCTCTTAAGATTATTAACAAAGTGAAACATATGGGCCTGTGT
CCTGATTCTAGTACATACAACTTGATGATATGTCCTCTATGTGAATCATCTAAGTTGGAT
GAGGCGAGAAGTATATTAGCTCTGATGGAGGAAGACAATATTAGTCCAACTATTGAAACG
TACCATGCATTTCTTGCAAGTGCTAGTCTAGAAGGAACTGTTGAAGTTCTTAACACTATG
AGAAAAGCTGGAGTTGGTCCAAACGGGGAGACCTTTCTGTTAATTCTTGATAGGTTTATG
AAGTTGAAGCAGCCTGAAACTGCATTGACGATATGGCTGGAGATGAAGCAGTATGAGGTA
GTGCCCGAGTCTGCACATTATTCTCTTTTGGTGGGAGGACTTCTTGAGTGCAGGTTATAT
TCCAAGGCTAGAGAGTTATATGCAGAGATGAAATCCAATGGAATTGATGACCCAGGTCTC
CGAAAGTTCTTACAGCCAACTGGCCCAAGAGGACAAGGAGGTGTGTCAAATCCCAAACAT
ACTAAAAACGGGAAACTGGTGAAACATGGGACACACAAGGTGATCAGAAATGAAAAACAT
ACAAGGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024996
PEP Infomation

pacid=37462352 transcript=PGSC0003DMT400036850 locus=PGSC0003DMG400014209 ID=PGSC0003DMT400036850.v4.03 annot-version=v4.03
Sequence

MRLLSLARRLYSARPIAFKHIIDYQHPSLFSAQLEIRCHFFGAFRQPSVRHCSTIPPKLP
FFSSGNSTSYEIINFDKCVDTLREKYHDGVNEFVGIAQKASDFGSGDEAILFLDECGVKP
NQELVFLVIWELRDQWKLAYLLFKWGEKCKCLEENTWCLMIWILGNHSKFSTAWSLIRDL
LQMSTDIQEAVLIMIDRYAAANNAGKAIQTFQILEKFSMSPDQRTLLTFLNILCKHGFIE
EAEEFMLINKKLFPLEIDGFNIILNGWCNIVVDIFEAKRVWREMSKCCIEPNGTSYSHMI
SCFSKVRNLFDSLRLYDEMQKRGWVPGMQVYNALVYVLTCENCVKESLKIINKVKHMGLC
PDSSTYNLMICPLCESSKLDEARSILALMEEDNISPTIETYHAFLASASLEGTVEVLNTM
RKAGVGPNGETFLLILDRFMKLKQPETALTIWLEMKQYEVVPESAHYSLLVGGLLECRLY
SKARELYAEMKSNGIDDPGLRKFLQPTGPRGQGGVSNPKHTKNGKLVKHGTHKVIRNEKH
TR*

Transcript Sequence

Transcript ID

PGSC0003DMT400036850
Transcript Infomation

pacid=37462352 locus=PGSC0003DMG400014209 ID=PGSC0003DMT400036850.v4.03 annot-version=v4.03
Sequence

ATGCGGTTGCTCTCTCTTGCACGAAGGCTCTACAGTGCTCGTCCCATCGCTTTTAAGCAT
ATAATCGACTATCAGCATCCTTCATTGTTTTCCGCCCAGTTGGAAATAAGGTGTCATTTC
TTTGGGGCATTTCGTCAACCATCTGTCAGGCACTGTTCTACTATACCGCCCAAGCTCCCT
TTCTTTAGCTCCGGCAATTCCACTAGCTACGAAATCATCAACTTCGATAAGTGTGTGGAT
ACATTGCGTGAAAAGTATCATGACGGTGTTAATGAATTTGTTGGGATTGCACAAAAGGCC
AGTGATTTTGGTTCTGGAGATGAAGCCATATTGTTTCTTGATGAATGCGGGGTTAAACCG
AACCAAGAATTGGTCTTTTTGGTGATTTGGGAGTTGAGAGATCAGTGGAAGTTAGCTTAT
TTGCTATTCAAATGGGGTGAGAAATGCAAATGTCTTGAAGAAAATACGTGGTGTTTGATG
ATATGGATTCTGGGCAACCATAGTAAATTCAGTACTGCTTGGTCTTTGATCCGAGATCTT
CTTCAGATGTCAACAGATATTCAAGAAGCTGTCCTCATCATGATTGATAGATATGCTGCT
GCCAATAATGCTGGTAAAGCTATACAGACATTCCAGATTTTGGAGAAATTTAGTATGTCT
CCTGATCAGAGAACATTATTGACATTCTTGAATATTCTCTGTAAGCATGGTTTTATTGAA
GAGGCTGAAGAATTCATGCTTATCAATAAGAAGCTATTCCCCTTGGAAATTGATGGCTTT
AATATTATTCTCAATGGATGGTGTAATATAGTGGTTGATATATTTGAAGCCAAAAGAGTA
TGGCGAGAAATGTCCAAGTGTTGTATTGAACCAAATGGTACTTCATATTCCCACATGATT
TCCTGCTTCTCCAAGGTTAGAAATTTGTTTGATTCACTAAGACTTTATGATGAAATGCAG
AAACGGGGCTGGGTTCCAGGCATGCAGGTGTATAATGCTTTGGTATATGTACTGACTTGT
GAGAATTGTGTGAAGGAATCTCTTAAGATTATTAACAAAGTGAAACATATGGGCCTGTGT
CCTGATTCTAGTACATACAACTTGATGATATGTCCTCTATGTGAATCATCTAAGTTGGAT
GAGGCGAGAAGTATATTAGCTCTGATGGAGGAAGACAATATTAGTCCAACTATTGAAACG
TACCATGCATTTCTTGCAAGTGCTAGTCTAGAAGGAACTGTTGAAGTTCTTAACACTATG
AGAAAAGCTGGAGTTGGTCCAAACGGGGAGACCTTTCTGTTAATTCTTGATAGGTTTATG
AAGTTGAAGCAGCCTGAAACTGCATTGACGATATGGCTGGAGATGAAGCAGTATGAGGTA
GTGCCCGAGTCTGCACATTATTCTCTTTTGGTGGGAGGACTTCTTGAGTGCAGGTTATAT
TCCAAGGCTAGAGAGTTATATGCAGAGATGAAATCCAATGGAATTGATGACCCAGGTCTC
CGAAAGTTCTTACAGCCAACTGGCCCAAGAGGACAAGGAGGTGTGTCAAATCCCAAACAT
ACTAAAAACGGGAAACTGGTGAAACATGGGACACACAAGGTGATCAGAAATGAAAAACAT
ACAAGGTAA