Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036828
CDS Infomation

pacid=37460282 polypeptide=PGSC0003DMP400024980 locus=PGSC0003DMG400014199 ID=PGSC0003DMT400036828.v4.03 annot-version=v4.03
Sequence

ATGGGTATTCCACAGTATATAGTAGCTGGTCCATCGGAGATACTTGCCATCACCGGAAGT
GGCATAAAAGAAATTAGACTGGAGAAGAAGCACTTTTTATGGCCCCTTCAAAAATGCACC
AGGCTTGATATATCACCTGTCAACTATTCGTTCGAAGTTCAAGCTATGAGTGCTGAAAAA
CTCCCTTTTGTTCTCCCTGCTGTTTTCACAATTGGGCCACAATTGGACGAAAACAATGAG
AGTCTGATTAAGTATGCGCAGCTTGTATCTAATCATGACAAGAATTCAAATCATGTTAAA
GAACTTGTAAAAGGAATTATCGAGGGGGAAACGCGTGTTCTTGCTGCTTCAATGACTATG
GAACAGATCTTTAAGGGAACTAAAGAGTTTAAGAAAGAAGTATTTGAGAAAGTGCAGCTT
GAATTGAATCAATTTGGGCTTTATATCTATAATGCTAATGTTAAACAACTTGTAGATGTC
CCTGGTCATGAGTATTTCTCTTACCTTGGACAAAAAACTCAGATGGAAGCTGCTAACCAA
GCTAAGATAGATGTTGCAGAGGCGAGGATGAAAGGAGAGATAGGTTCAAAGCAAAGAGAT
GGAGAGACAAAGCAGAATGCTGCTAAGATTGATGCTGAGACAATGATCATATCAACCAGA
AGGCAAGGAGAAGGGAAAAAAGAAGAAGTTAGAGTATTTGAAAACCAAAAAGAAGCAGAG
GTTGTTGAGGCAAGTGCTGAGCTGGCAAGGAAGAAAGCCGGGTGGTCTCGAACTGCCAGG
CTGGCGGAGGTGGAAGCTGAGAAGGCGGTGGCAATAAGAGAGGCAGAGTTGCAAATGGAA
GTGGAGAAGAAGAAAGCTCTTGCTCAGACTGCTAAGCTCAAGGCTGATCTTCTCAGCAAG
GCTAATGTTGAATACGATATTAAGGTGCAAGAGGCAAACTCAGTATTATACAAGCGACAG
AAAGAAGCGGAAGCTGCTCTATTCGAGAGCCAGAAGAAAGCAGAGGCACAAAGAGCAAGT
GCAGATGCTGACCTCTATGCTCGGCAGCAGGCTGCAAACAGTGAGCTGTATGCAAAGCAA
AAGGAAGCGGAAGAAATAGCAGCGATTGGAAAAGCACAAGCCATGTACTTAGGATCCATT
CTCAAGGAATTGAATCACGATTACTCTGCTCTCAGAGACTATTTGATGATCAACAACGGT
ATCTATAAGGAAATCGCCCAACTCAACGCTCAAGCAGTGAATGGTATGCAGCCAAAGATT
AGCATTTGGTCAGGCGCTAATGGAGGTGAAAGGAATGGTGGTGAAGGTGGGAGTGGATTG
AAGGATGTTGCCGGTTTGTACCGCATGCTGCCTCCTCTGCTTCAAACAGTGCACGAACAA
ACTGGGATGCAGCCTCCTGCTTGGCTTGCAACCTTACCTGATGAATCTAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400024980
PEP Infomation

pacid=37460282 transcript=PGSC0003DMT400036828 locus=PGSC0003DMG400014199 ID=PGSC0003DMT400036828.v4.03 annot-version=v4.03
Sequence

MGIPQYIVAGPSEILAITGSGIKEIRLEKKHFLWPLQKCTRLDISPVNYSFEVQAMSAEK
LPFVLPAVFTIGPQLDENNESLIKYAQLVSNHDKNSNHVKELVKGIIEGETRVLAASMTM
EQIFKGTKEFKKEVFEKVQLELNQFGLYIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQ
AKIDVAEARMKGEIGSKQRDGETKQNAAKIDAETMIISTRRQGEGKKEEVRVFENQKEAE
VVEASAELARKKAGWSRTARLAEVEAEKAVAIREAELQMEVEKKKALAQTAKLKADLLSK
ANVEYDIKVQEANSVLYKRQKEAEAALFESQKKAEAQRASADADLYARQQAANSELYAKQ
KEAEEIAAIGKAQAMYLGSILKELNHDYSALRDYLMINNGIYKEIAQLNAQAVNGMQPKI
SIWSGANGGERNGGEGGSGLKDVAGLYRMLPPLLQTVHEQTGMQPPAWLATLPDESK*

Transcript Sequence

Transcript ID

PGSC0003DMT400036828
Transcript Infomation

pacid=37460282 locus=PGSC0003DMG400014199 ID=PGSC0003DMT400036828.v4.03 annot-version=v4.03
Sequence

ATGGGTATTCCACAGTATATAGTAGCTGGTCCATCGGAGATACTTGCCATCACCGGAAGT
GGCATAAAAGAAATTAGACTGGAGAAGAAGCACTTTTTATGGCCCCTTCAAAAATGCACC
AGGCTTGATATATCACCTGTCAACTATTCGTTCGAAGTTCAAGCTATGAGTGCTGAAAAA
CTCCCTTTTGTTCTCCCTGCTGTTTTCACAATTGGGCCACAATTGGACGAAAACAATGAG
AGTCTGATTAAGTATGCGCAGCTTGTATCTAATCATGACAAGAATTCAAATCATGTTAAA
GAACTTGTAAAAGGAATTATCGAGGGGGAAACGCGTGTTCTTGCTGCTTCAATGACTATG
GAACAGATCTTTAAGGGAACTAAAGAGTTTAAGAAAGAAGTATTTGAGAAAGTGCAGCTT
GAATTGAATCAATTTGGGCTTTATATCTATAATGCTAATGTTAAACAACTTGTAGATGTC
CCTGGTCATGAGTATTTCTCTTACCTTGGACAAAAAACTCAGATGGAAGCTGCTAACCAA
GCTAAGATAGATGTTGCAGAGGCGAGGATGAAAGGAGAGATAGGTTCAAAGCAAAGAGAT
GGAGAGACAAAGCAGAATGCTGCTAAGATTGATGCTGAGACAATGATCATATCAACCAGA
AGGCAAGGAGAAGGGAAAAAAGAAGAAGTTAGAGTATTTGAAAACCAAAAAGAAGCAGAG
GTTGTTGAGGCAAGTGCTGAGCTGGCAAGGAAGAAAGCCGGGTGGTCTCGAACTGCCAGG
CTGGCGGAGGTGGAAGCTGAGAAGGCGGTGGCAATAAGAGAGGCAGAGTTGCAAATGGAA
GTGGAGAAGAAGAAAGCTCTTGCTCAGACTGCTAAGCTCAAGGCTGATCTTCTCAGCAAG
GCTAATGTTGAATACGATATTAAGGTGCAAGAGGCAAACTCAGTATTATACAAGCGACAG
AAAGAAGCGGAAGCTGCTCTATTCGAGAGCCAGAAGAAAGCAGAGGCACAAAGAGCAAGT
GCAGATGCTGACCTCTATGCTCGGCAGCAGGCTGCAAACAGTGAGCTGTATGCAAAGCAA
AAGGAAGCGGAAGAAATAGCAGCGATTGGAAAAGCACAAGCCATGTACTTAGGATCCATT
CTCAAGGAATTGAATCACGATTACTCTGCTCTCAGAGACTATTTGATGATCAACAACGGT
ATCTATAAGGAAATCGCCCAACTCAACGCTCAAGCAGTGAATGGTATGCAGCCAAAGATT
AGCATTTGGTCAGGCGCTAATGGAGGTGAAAGGAATGGTGGTGAAGGTGGGAGTGGATTG
AAGGATGTTGCCGGTTTGTACCGCATGCTGCCTCCTCTGCTTCAAACAGTGCACGAACAA
ACTGGGATGCAGCCTCCTGCTTGGCTTGCAACCTTACCTGATGAATCTAAATGA