Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036774
CDS Infomation

pacid=37459004 polypeptide=PGSC0003DMP400024938 locus=PGSC0003DMG400014182 ID=PGSC0003DMT400036774.v4.03 annot-version=v4.03
Sequence

ATGAGCTTTCCTGCACAAAACAATAGAAGGAATAACAACAGTAATCGACCTAGAAACATT
AATAATAATCCTGTTGTTCAAAGTGGTGGTGCTCGTCGTGAGTGGGTAGCTAGGGGATCC
ACTCCAACCAACACTGTTCCATTTTCAACTGCCCCTGTTACCCCGGTATCAACAACCACT
GTTGTGACCCCTGGGTTTGGTGGGAATGGAAGAGACAATGATAATGTGCCAGTTGTGCCG
GTTAATCGATTTCAAAATCAAAATCAGACCTATGTGGAACCCAAATTCAATAGGGGGACA
TATGGGAATCAGAGGGAAAGGGGCAGGGGGAGCTATAATCATCAGGAGAACAGGATGGAG
AGGCCGGTCAGGGAGGTCAGTGGGAGGATTAATCAAGAGCAGGTGAAGGATCCTAATTTG
CCTCAACTTGTGCAAGAAATAGAGGAGAAGCTGTTGAAGGGTAACATTGAGTGCATGATA
TGCTATGATATGGTGAGGAGGTCTGCGCCCATGTGGTCATGTTCGAGCTGCTACTCGATT
TTCCATCTTCATTGTACCAAGAAATGGGCAAGAGCTCCCACTTCTGTTGACACATCTGCA
GAGAAGAATCAAAGGTTTAATTGGCGTTGCCCAGGTTGTCAATCAGTCCAGCTCACTTCA
TCCAGGGACATACGGTATCTTTGCTTTTGTGGGAAGAGGCAAGACCCCCCTTCAGATTTA
TACTTGACTCCACATTCATGTGGAGAGCCTTGTGGCAAGAAACTTGAGAAGGAGCTTCCA
GGGAATGGTCTGAGTGAAGAGGATCTTTGCCCTCATGTTTGTGTCCTACAATGCCATCCT
GGTCCTTGTCCACCTTGTAAGGCATTTGCTCCAGCTAGAAGTTGCCCCTGCGGGAAGGAA
GTAATTACCACTCGCTGCTCTGATCGGAAGTCCGTTCTTACATGTGGACAGCAGTGTGGT
AAGCTTCTTGACTGTGGGCGTCATAGGTGTGAACAAACTTGCCATGTTGGTCCTTGTGGC
CATTGTCAAATTGTTGTGGATGCCTATTGCTTTTGTAAGAAGAAAACAGAGTCTGTTCTT
TGTGGAGATATGGGTGTGAAAGGATCTATCAAGATGGAGGATGGCGTCTTTTCATGCAAT
TCAGTTTGTGGAAAGAAGCTTAGTTGTGGAAACCACATCTGCCGTGAGCTCTGCCATCCA
GGGCCATGTGGGGACTGTGCTTTGTTGCCTAGCAAGGTCAAGGCATGCTGTTGCGGTAAA
ACCAGCTTGGAAGAAGAAAGGCACAGTTGTTTGGATCCAATTCCAACCTGTTCCAAGGTC
TGCGGAAAGCGCCTCCGTTGTGGGGTACATCGCTGTGAAGCTGTGTGCCATTCTGGTGAC
TGTGCACCATGTCTTGTTCCTGTGAATCAACGCTGCCGCTGTGGGTCAACTTCTCGAACA
GTAGAGTGTTACAGAACGCAGGCAGAAGATGAGCAGTTCACTTGTGATAGACCTTGTGGG
CAAAAGAAGAACTGTGGAAGGCATCGATGTAGTGAGCGATGTTGCCCTCTTTCTAATCCA
AAAAACTCCATCACGGGTGGTTGGAATCCTCATTTTTGTTCAATGCCGTGTGAGAAGAAG
CTTAGATGTGGGCAGCATTCTTGTGAGTCACTTTGTCACAGTGGTCACTGCCCTCCCTGC
CTTGAGACAATTTTCACCGATTTGACTTGTGCTTGTGGGAGAACATCAATCCCTCCTCCG
CTACCTTGTGGCACACCTCTTCCTTCGTGTCAGTTACCATGCTCGGTTTCTCAGCCTTGT
GGCCACCCACCTACTCACAGCTGCCATTTTGGGGACTGCCTGCCATGTGCTGTTCCTGTA
GCAAAAGAGTGCGTTGGTGGACATGTAATTTTGAGAAATATACCTTGCGGATCAAAGGAC
ATCAGGTGTAACAAGCTTTGTGGGAAGACCAGGCAGTGTGGCTTGCACGCATGTGCTAGA
ACTTGTCATCCTTCACCATGTGATGTTTCTGCCGGACCCAGCAACGGCTCCAGAGACTCT
TGTGGGCAGACGTGTGGTGCTCCTAGAAGAGATTGCAGGCACTCATGTACTGCTCTTTGT
CACCCCTCTTCTTCATGTCCTGATGTTAGATGTGAGTTTCCTGTTACTATTACTTGTTCT
TGTGGCCGGATCACAGCAAATGTTCCTTGTGATGCTGGAGGTCAGATCGTTGACTCTGTT
TTCGAAGCTTCTATAATCCACAAGCTGCCTTCATCTCTTCAACCTATTGAATTAAATGGG
AAGAAGGTTCCTCTTGGTCAGAGGAAACTTACTTGTGATGATGAGTGTGCAAAGATGGAG
AAAAAAAAGGTTCTTTCCGATGCTTTTGGTATAACTCCCCCTAATTTGGAGGCCCTCCAT
TTTGGTGAGAATGCAGCTGTCTCTGAAGTGCTGGGGGAGCTTCTTAGGCGGGATGCTAAG
TGGGTGTTGTCTATAGAGGAAAGGTGCAAGTTTTTGGTTCTTGGCAGGAGCAGAGGGGGG
GTGAACGCGCTCAAAGTTCATGTGTTTTGCCCAATGTCGAAAGAAAAGCGGGATGCAATT
AGACTGATAGCTGCAAGGTGGAAGCTTTCAGTAAATGCAGCTGGTTGGGAACCCAAGAGA
TTCATCGCTGTACATGTTACACCCAAGTCCAAAGCTCCAACGCGTATACTTGGTCCCAAA
GGTTGTACTGTCAATAACATTGCTCAGCCTGCTGTTTTTGATTCTCTGGTGGATATGGAT
CCAAGGCTTGTTGTGGCTTTGTTTGACTTGCCAAGAGATGCAGACATTAGTGCGTTAGTT
CTCAGGTTTGGTGGTGAGTGTGAGCTTGTCTGGTTGAATGACAAGAATGCCTTGGCTGTG
TTCAATGATCCTGCCCGAGCAGCAACAGCTATGAGAAGGCTAGACCAGGGGTCGGCCTAT
TGTGGTGCTGCTGTAGTTCATCAGAGTGGTGTTGCATCAGCAGTGGCATCCGCTACTAAT
GTTTGGGGAGTCTCTGGAGGAGCGAAGGACGGGGGAGGAGTTGCAGCTCTTAAGGGTAAT
CCATGGAAGAAGGCTGTAGTCCAGGAGCCTCATTTGAGGGAGAGTCTATGGGATGCCGAT
GAATGGTCCAAGAATCCCACTGATTTAGCAGCCCCTTCTGCCTGGAGGGCGAATGAAGCT
CCACCTACTGCCTCGTCTAATAGGTGGAGTGTCTTAGAGCCTGAAATTACTTCCAGCTTG
CCCAGGGTGTCTATTACGATCCAGAAACCTGTTACTGAGACAGAAGTGGGGGGTTCAGTT
TTACCCCCCAAACCTCAAGATGTGGGGATTGACGATATGGCAGATGTAGTGGACGATTGG
GACAAGGCTTACGATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024938
PEP Infomation

pacid=37459004 transcript=PGSC0003DMT400036774 locus=PGSC0003DMG400014182 ID=PGSC0003DMT400036774.v4.03 annot-version=v4.03
Sequence

MSFPAQNNRRNNNSNRPRNINNNPVVQSGGARREWVARGSTPTNTVPFSTAPVTPVSTTT
VVTPGFGGNGRDNDNVPVVPVNRFQNQNQTYVEPKFNRGTYGNQRERGRGSYNHQENRME
RPVREVSGRINQEQVKDPNLPQLVQEIEEKLLKGNIECMICYDMVRRSAPMWSCSSCYSI
FHLHCTKKWARAPTSVDTSAEKNQRFNWRCPGCQSVQLTSSRDIRYLCFCGKRQDPPSDL
YLTPHSCGEPCGKKLEKELPGNGLSEEDLCPHVCVLQCHPGPCPPCKAFAPARSCPCGKE
VITTRCSDRKSVLTCGQQCGKLLDCGRHRCEQTCHVGPCGHCQIVVDAYCFCKKKTESVL
CGDMGVKGSIKMEDGVFSCNSVCGKKLSCGNHICRELCHPGPCGDCALLPSKVKACCCGK
TSLEEERHSCLDPIPTCSKVCGKRLRCGVHRCEAVCHSGDCAPCLVPVNQRCRCGSTSRT
VECYRTQAEDEQFTCDRPCGQKKNCGRHRCSERCCPLSNPKNSITGGWNPHFCSMPCEKK
LRCGQHSCESLCHSGHCPPCLETIFTDLTCACGRTSIPPPLPCGTPLPSCQLPCSVSQPC
GHPPTHSCHFGDCLPCAVPVAKECVGGHVILRNIPCGSKDIRCNKLCGKTRQCGLHACAR
TCHPSPCDVSAGPSNGSRDSCGQTCGAPRRDCRHSCTALCHPSSSCPDVRCEFPVTITCS
CGRITANVPCDAGGQIVDSVFEASIIHKLPSSLQPIELNGKKVPLGQRKLTCDDECAKME
KKKVLSDAFGITPPNLEALHFGENAAVSEVLGELLRRDAKWVLSIEERCKFLVLGRSRGG
VNALKVHVFCPMSKEKRDAIRLIAARWKLSVNAAGWEPKRFIAVHVTPKSKAPTRILGPK
GCTVNNIAQPAVFDSLVDMDPRLVVALFDLPRDADISALVLRFGGECELVWLNDKNALAV
FNDPARAATAMRRLDQGSAYCGAAVVHQSGVASAVASATNVWGVSGGAKDGGGVAALKGN
PWKKAVVQEPHLRESLWDADEWSKNPTDLAAPSAWRANEAPPTASSNRWSVLEPEITSSL
PRVSITIQKPVTETEVGGSVLPPKPQDVGIDDMADVVDDWDKAYD*

Transcript Sequence

Transcript ID

PGSC0003DMT400036774
Transcript Infomation

pacid=37459004 locus=PGSC0003DMG400014182 ID=PGSC0003DMT400036774.v4.03 annot-version=v4.03
Sequence

ATGAGCTTTCCTGCACAAAACAATAGAAGGAATAACAACAGTAATCGACCTAGAAACATT
AATAATAATCCTGTTGTTCAAAGTGGTGGTGCTCGTCGTGAGTGGGTAGCTAGGGGATCC
ACTCCAACCAACACTGTTCCATTTTCAACTGCCCCTGTTACCCCGGTATCAACAACCACT
GTTGTGACCCCTGGGTTTGGTGGGAATGGAAGAGACAATGATAATGTGCCAGTTGTGCCG
GTTAATCGATTTCAAAATCAAAATCAGACCTATGTGGAACCCAAATTCAATAGGGGGACA
TATGGGAATCAGAGGGAAAGGGGCAGGGGGAGCTATAATCATCAGGAGAACAGGATGGAG
AGGCCGGTCAGGGAGGTCAGTGGGAGGATTAATCAAGAGCAGGTGAAGGATCCTAATTTG
CCTCAACTTGTGCAAGAAATAGAGGAGAAGCTGTTGAAGGGTAACATTGAGTGCATGATA
TGCTATGATATGGTGAGGAGGTCTGCGCCCATGTGGTCATGTTCGAGCTGCTACTCGATT
TTCCATCTTCATTGTACCAAGAAATGGGCAAGAGCTCCCACTTCTGTTGACACATCTGCA
GAGAAGAATCAAAGGTTTAATTGGCGTTGCCCAGGTTGTCAATCAGTCCAGCTCACTTCA
TCCAGGGACATACGGTATCTTTGCTTTTGTGGGAAGAGGCAAGACCCCCCTTCAGATTTA
TACTTGACTCCACATTCATGTGGAGAGCCTTGTGGCAAGAAACTTGAGAAGGAGCTTCCA
GGGAATGGTCTGAGTGAAGAGGATCTTTGCCCTCATGTTTGTGTCCTACAATGCCATCCT
GGTCCTTGTCCACCTTGTAAGGCATTTGCTCCAGCTAGAAGTTGCCCCTGCGGGAAGGAA
GTAATTACCACTCGCTGCTCTGATCGGAAGTCCGTTCTTACATGTGGACAGCAGTGTGGT
AAGCTTCTTGACTGTGGGCGTCATAGGTGTGAACAAACTTGCCATGTTGGTCCTTGTGGC
CATTGTCAAATTGTTGTGGATGCCTATTGCTTTTGTAAGAAGAAAACAGAGTCTGTTCTT
TGTGGAGATATGGGTGTGAAAGGATCTATCAAGATGGAGGATGGCGTCTTTTCATGCAAT
TCAGTTTGTGGAAAGAAGCTTAGTTGTGGAAACCACATCTGCCGTGAGCTCTGCCATCCA
GGGCCATGTGGGGACTGTGCTTTGTTGCCTAGCAAGGTCAAGGCATGCTGTTGCGGTAAA
ACCAGCTTGGAAGAAGAAAGGCACAGTTGTTTGGATCCAATTCCAACCTGTTCCAAGGTC
TGCGGAAAGCGCCTCCGTTGTGGGGTACATCGCTGTGAAGCTGTGTGCCATTCTGGTGAC
TGTGCACCATGTCTTGTTCCTGTGAATCAACGCTGCCGCTGTGGGTCAACTTCTCGAACA
GTAGAGTGTTACAGAACGCAGGCAGAAGATGAGCAGTTCACTTGTGATAGACCTTGTGGG
CAAAAGAAGAACTGTGGAAGGCATCGATGTAGTGAGCGATGTTGCCCTCTTTCTAATCCA
AAAAACTCCATCACGGGTGGTTGGAATCCTCATTTTTGTTCAATGCCGTGTGAGAAGAAG
CTTAGATGTGGGCAGCATTCTTGTGAGTCACTTTGTCACAGTGGTCACTGCCCTCCCTGC
CTTGAGACAATTTTCACCGATTTGACTTGTGCTTGTGGGAGAACATCAATCCCTCCTCCG
CTACCTTGTGGCACACCTCTTCCTTCGTGTCAGTTACCATGCTCGGTTTCTCAGCCTTGT
GGCCACCCACCTACTCACAGCTGCCATTTTGGGGACTGCCTGCCATGTGCTGTTCCTGTA
GCAAAAGAGTGCGTTGGTGGACATGTAATTTTGAGAAATATACCTTGCGGATCAAAGGAC
ATCAGGTGTAACAAGCTTTGTGGGAAGACCAGGCAGTGTGGCTTGCACGCATGTGCTAGA
ACTTGTCATCCTTCACCATGTGATGTTTCTGCCGGACCCAGCAACGGCTCCAGAGACTCT
TGTGGGCAGACGTGTGGTGCTCCTAGAAGAGATTGCAGGCACTCATGTACTGCTCTTTGT
CACCCCTCTTCTTCATGTCCTGATGTTAGATGTGAGTTTCCTGTTACTATTACTTGTTCT
TGTGGCCGGATCACAGCAAATGTTCCTTGTGATGCTGGAGGTCAGATCGTTGACTCTGTT
TTCGAAGCTTCTATAATCCACAAGCTGCCTTCATCTCTTCAACCTATTGAATTAAATGGG
AAGAAGGTTCCTCTTGGTCAGAGGAAACTTACTTGTGATGATGAGTGTGCAAAGATGGAG
AAAAAAAAGGTTCTTTCCGATGCTTTTGGTATAACTCCCCCTAATTTGGAGGCCCTCCAT
TTTGGTGAGAATGCAGCTGTCTCTGAAGTGCTGGGGGAGCTTCTTAGGCGGGATGCTAAG
TGGGTGTTGTCTATAGAGGAAAGGTGCAAGTTTTTGGTTCTTGGCAGGAGCAGAGGGGGG
GTGAACGCGCTCAAAGTTCATGTGTTTTGCCCAATGTCGAAAGAAAAGCGGGATGCAATT
AGACTGATAGCTGCAAGGTGGAAGCTTTCAGTAAATGCAGCTGGTTGGGAACCCAAGAGA
TTCATCGCTGTACATGTTACACCCAAGTCCAAAGCTCCAACGCGTATACTTGGTCCCAAA
GGTTGTACTGTCAATAACATTGCTCAGCCTGCTGTTTTTGATTCTCTGGTGGATATGGAT
CCAAGGCTTGTTGTGGCTTTGTTTGACTTGCCAAGAGATGCAGACATTAGTGCGTTAGTT
CTCAGGTTTGGTGGTGAGTGTGAGCTTGTCTGGTTGAATGACAAGAATGCCTTGGCTGTG
TTCAATGATCCTGCCCGAGCAGCAACAGCTATGAGAAGGCTAGACCAGGGGTCGGCCTAT
TGTGGTGCTGCTGTAGTTCATCAGAGTGGTGTTGCATCAGCAGTGGCATCCGCTACTAAT
GTTTGGGGAGTCTCTGGAGGAGCGAAGGACGGGGGAGGAGTTGCAGCTCTTAAGGGTAAT
CCATGGAAGAAGGCTGTAGTCCAGGAGCCTCATTTGAGGGAGAGTCTATGGGATGCCGAT
GAATGGTCCAAGAATCCCACTGATTTAGCAGCCCCTTCTGCCTGGAGGGCGAATGAAGCT
CCACCTACTGCCTCGTCTAATAGGTGGAGTGTCTTAGAGCCTGAAATTACTTCCAGCTTG
CCCAGGGTGTCTATTACGATCCAGAAACCTGTTACTGAGACAGAAGTGGGGGGTTCAGTT
TTACCCCCCAAACCTCAAGATGTGGGGATTGACGATATGGCAGATGTAGTGGACGATTGG
GACAAGGCTTACGATTGA