Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036720
CDS Infomation

pacid=37461011 polypeptide=PGSC0003DMP400024904 locus=PGSC0003DMG400014161 ID=PGSC0003DMT400036720.v4.03 annot-version=v4.03
Sequence

ATGCAGCCGCCACATCAGCATTCGCGAATCAATCTTGTTGAACTGAAAGCTCAGATAGTG
AGGAAACTTGGACCTGAGAGGTCTAAACAGTACTTTTATTACTTAAATAGGTTATTGAGT
TTGAAAATAAGCAAGGTTGAGTTCAATAACCTTTGTCTTAGGATATTGGGTAGAGAGAAT
ATTACATTGCATAATCAGTTCATTCGTTCCATTTTGAGAAATGCTTGCAGCGCAAAAGTT
CCACCGCCAACTCATGAGACTGATGTTTCGAAGCCTGGTGCAGCAGTTGGCAGTAATGAG
CCCCTAAGTGATGCTTATGAGCAAAATGGATCACATGTTTCCTCAAGCCAGGCTTCAAGT
CAACCAGGTTTGTCTAATGGAGATATTCTCCCATTATCTCCTCGAAAGGTTAGAACAGGC
TATCGTGATCGTAGGACTGGGGATCGTTGTAGTGCGCTTAGTCAAAATGGGAAGACCAAT
TTCACTTTTCAACAACCGACAGCAACAGAATCAAGTTTCGATGTTATGGAAAATGGGGAT
ATCAATCCCTCTGATTCACGGAGGGCTGTGCAGCATTATCAAGGACTCTTGCAGCAGACT
GATGATGAAAGGGAGGCATCTGGTCAAGAAACTGGTAGATTTTCTGTAATAAAGGGATCA
CAGGAAGGTCCAGCTTCAGTATATAACAAAGTCCATGTTAGAGATGACGGGAAAGAGATG
CATGCAAGGAGTCAGCTTCAAGCTCCACTTGGGGTTCCATTTTGCCCTGTTAGTGTTGGT
GGAGCACGTAAAGCATTGCCTTTGGCAACAAATAGTAAATGTGTTACCTCTTCTAGTTAT
GGTGCTTTGTTGGATAGTGTATCACTGAAGGAACGCATGGAGCAGATTGCTGCAGAACAA
GGCCTTGAAGGAGTGGCCATCAGTTGTGCCAACTTGTTGAACAATGGATTAGATTCTTAC
TTAAGAGGTTTAATTCGATCTTGTGTTCGACTTGTTGGGGCAAGGTCAGGGCACGAGCCT
GTAAGAAACAACACCAAAAAGCAGCAGACCCATGTGAAGCTCGTCAATGGCCTTAGACCC
GGTCTTCATTCTCAGATAAGTACTGGTAGACCTTCAGAAGTCATGCAAGAACATGCTCCC
AATAACTTGATATCATTGCAAGATTTTAGGGTTGCCATGGAACTGAACTCCCGGCAACTT
GGCGAAGACTGGCCATTGCTTCTAGAAAAAATTTGTTCACGCGCTTTTGAAGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400024904
PEP Infomation

pacid=37461011 transcript=PGSC0003DMT400036720 locus=PGSC0003DMG400014161 ID=PGSC0003DMT400036720.v4.03 annot-version=v4.03
Sequence

MQPPHQHSRINLVELKAQIVRKLGPERSKQYFYYLNRLLSLKISKVEFNNLCLRILGREN
ITLHNQFIRSILRNACSAKVPPPTHETDVSKPGAAVGSNEPLSDAYEQNGSHVSSSQASS
QPGLSNGDILPLSPRKVRTGYRDRRTGDRCSALSQNGKTNFTFQQPTATESSFDVMENGD
INPSDSRRAVQHYQGLLQQTDDEREASGQETGRFSVIKGSQEGPASVYNKVHVRDDGKEM
HARSQLQAPLGVPFCPVSVGGARKALPLATNSKCVTSSSYGALLDSVSLKERMEQIAAEQ
GLEGVAISCANLLNNGLDSYLRGLIRSCVRLVGARSGHEPVRNNTKKQQTHVKLVNGLRP
GLHSQISTGRPSEVMQEHAPNNLISLQDFRVAMELNSRQLGEDWPLLLEKICSRAFEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400036720
Transcript Infomation

pacid=37461011 locus=PGSC0003DMG400014161 ID=PGSC0003DMT400036720.v4.03 annot-version=v4.03
Sequence

ATGCAGCCGCCACATCAGCATTCGCGAATCAATCTTGTTGAACTGAAAGCTCAGATAGTG
AGGAAACTTGGACCTGAGAGGTCTAAACAGTACTTTTATTACTTAAATAGGTTATTGAGT
TTGAAAATAAGCAAGGTTGAGTTCAATAACCTTTGTCTTAGGATATTGGGTAGAGAGAAT
ATTACATTGCATAATCAGTTCATTCGTTCCATTTTGAGAAATGCTTGCAGCGCAAAAGTT
CCACCGCCAACTCATGAGACTGATGTTTCGAAGCCTGGTGCAGCAGTTGGCAGTAATGAG
CCCCTAAGTGATGCTTATGAGCAAAATGGATCACATGTTTCCTCAAGCCAGGCTTCAAGT
CAACCAGGTTTGTCTAATGGAGATATTCTCCCATTATCTCCTCGAAAGGTTAGAACAGGC
TATCGTGATCGTAGGACTGGGGATCGTTGTAGTGCGCTTAGTCAAAATGGGAAGACCAAT
TTCACTTTTCAACAACCGACAGCAACAGAATCAAGTTTCGATGTTATGGAAAATGGGGAT
ATCAATCCCTCTGATTCACGGAGGGCTGTGCAGCATTATCAAGGACTCTTGCAGCAGACT
GATGATGAAAGGGAGGCATCTGGTCAAGAAACTGGTAGATTTTCTGTAATAAAGGGATCA
CAGGAAGGTCCAGCTTCAGTATATAACAAAGTCCATGTTAGAGATGACGGGAAAGAGATG
CATGCAAGGAGTCAGCTTCAAGCTCCACTTGGGGTTCCATTTTGCCCTGTTAGTGTTGGT
GGAGCACGTAAAGCATTGCCTTTGGCAACAAATAGTAAATGTGTTACCTCTTCTAGTTAT
GGTGCTTTGTTGGATAGTGTATCACTGAAGGAACGCATGGAGCAGATTGCTGCAGAACAA
GGCCTTGAAGGAGTGGCCATCAGTTGTGCCAACTTGTTGAACAATGGATTAGATTCTTAC
TTAAGAGGTTTAATTCGATCTTGTGTTCGACTTGTTGGGGCAAGGTCAGGGCACGAGCCT
GTAAGAAACAACACCAAAAAGCAGCAGACCCATGTGAAGCTCGTCAATGGCCTTAGACCC
GGTCTTCATTCTCAGATAAGTACTGGTAGACCTTCAGAAGTCATGCAAGAACATGCTCCC
AATAACTTGATATCATTGCAAGATTTTAGGGTTGCCATGGAACTGAACTCCCGGCAACTT
GGCGAAGACTGGCCATTGCTTCTAGAAAAAATTTGTTCACGCGCTTTTGAAGAATAA