Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036692
CDS Infomation

pacid=37460821 polypeptide=PGSC0003DMP400024881 locus=PGSC0003DMG400014150 ID=PGSC0003DMT400036692.v4.03 annot-version=v4.03
Sequence

ATGACTTCAAGACAGCCAATTCCTTCAAATCCAAAACCCATGTCAGGCATAATTTTCCTC
ATCATTACAGTCTTAGCTTCACTTATAATCTTGTTTGCCATTCTTTATTTTCTTTACTAT
CTTTGGTATTCATTGGTGCATCGTTCTCGTACTAATCCTTATGATTCCAGTACACCCCTT
GTTAAGCTTCATAGGTTTTGTTACAAAGAGTTGAAGTCAGCAACTGAAGGTTTTAGTGAT
TCCACTTCTATTGGAAAAGGGGGATCTGGAACTGTATACAAAGGGATTCTTAAAGATGGG
AAATTGGTTGCTGTTAAGTTATTGGACTCTGGTTCATTTCAGAATGAAAGGGAGTTTCAG
AATGAACTTCAGATTCTTGGTGGGATAAAATCTCCTCTTGTAGTTTCTCTTCTTGGCTAT
TGTGTTGAGAGAAATAAAAGACTTGTTGTGTATGAGTATATGCCTAATAGAAGTTTACAA
GAATCCCTTTTTTCTGAGTCAAGTTTGTGTATGAATTGGGGTAGAAGGTTTGATGTCATT
CTTGATGTTGCTAGAGCATTGGCATTTTTGCATCTTGATTGTGACCCACCAGTGATTCAT
GGGGATGTTAAGCCTAGCAATGTGCTTCTTGATTCAGAGTATAAGGCTAAGCTTTCTGAT
TTTGGGTTGTCAAGATTGAAACTTGAGGAGGAATTTGGTGTGGATATGTTTAGTCAAGAA
TTGGGGAAGAGTCAGGAGTTGTGGAAAAGTCAAGACCTTTCTGGGAATTTAGGGGGGATC
ACTACAGGCACTGAGACTCCAACACCAATTGGGACACCTATGGAAAGTCAAGATGAGGTA
GATTTTGCTATGGCTTTACAAGCTTCTTCTTCTTCCAAAGGCAGTAAAATTTTCCAAAAT
ATTAGACCTTTTGGCTTTAATTCTGTTACTCAAAATTTGAGTTTTTTTAATGAGAATGAT
GCCACAACTAGGACTGCCAAGGGAAAGGAAGTGTCAATTGTTGAAAATGGTGTAGCAAGT
TATGATGAGGAGCTTAGTAGTGTTGATCATAGGAAAGAGTTGGATTTGGGTGGTGGAGAT
GATAAAGCAAGAAATATCAAACAATGGGGTAAAGATTGGTGGTGGAAACAGGATGGTTGT
GGTGAATTATGTAGCAAAGATTATGTAAAGGAGTGGATTGGAAGCCAGATTTGCCCATCA
ACTAATCCTGAGTGGGACTTAGAAAAGAAATGCTCACCCCAGAAAACCAGTTTAGATATT
TCAGCACCACTGAGTAAACCTGAGGAAGTGCAAGAAACCACATTACAAGAACAAGAGCCA
GAAACTCTCAAGAAAGAGTCCGATAAGGAGATAACGGAGAAAACGTGTAATAAGAAGCCT
AGGAAAATGAAAGAGTGGTGGAAAGAGGAGCATCTTGATGAACTAAGCAAGAAGAGTAAG
AAGGCCAAGAGACTAGAAAGTTTCTGTAAGAAGCGGTTCAAGATTCCACATTTTGATATT
GGTAAACGCTTTCGATTCAAGAGAAAGAGGAAATTCGGAATGCAGGATGAGAATGGAGAT
GATCCAGATGCAGAATTCAGTTTTAGGAAAGGTTGGAAGAGAAAGCATACGCGTTCAATG
GGGAGTGATATGTGGAGCGGTGATCTATTCAGTCGAGAGTTAAGCAGCACGACGAGCATG
AGAGGTACATTGTGCTATGTTGCACCAGAATATGGAGGGTGTGGTTACTTAATGGAAAAG
GCTGATATATACAGCTTTGGAGTTCTTGTCCTTGTGATAGTCTCTGGTAGGAGGCCATTA
CATGTCCTTAATTCGCCAATGAAACTCGAGAAAGCAAATCTGGTAAGCTGGTGTAAACAG
CTAGCTCATGCTGGAAATGTGTTAGAACTTGTTGATGAAAGACTAAAAGATGACTACAAC
AAAGAACAAGCAAGTCTCTGCATTAACTTGGCACTTGCTTGCTTACAAAAAATGCCCGAA
TTACGACCTGACATTAGTGACATTGTTAAGATTTTGAAAGGTGAGATGGAGTTACCATCC
CTCCCTTTTGAATTCTCTCCCTCCCCACCTTCGAGAACGTTCAGCAGATCAAAAAGACGA
CATAAGAGTTATGCAGAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400024881
PEP Infomation

pacid=37460821 transcript=PGSC0003DMT400036692 locus=PGSC0003DMG400014150 ID=PGSC0003DMT400036692.v4.03 annot-version=v4.03
Sequence

MTSRQPIPSNPKPMSGIIFLIITVLASLIILFAILYFLYYLWYSLVHRSRTNPYDSSTPL
VKLHRFCYKELKSATEGFSDSTSIGKGGSGTVYKGILKDGKLVAVKLLDSGSFQNEREFQ
NELQILGGIKSPLVVSLLGYCVERNKRLVVYEYMPNRSLQESLFSESSLCMNWGRRFDVI
LDVARALAFLHLDCDPPVIHGDVKPSNVLLDSEYKAKLSDFGLSRLKLEEEFGVDMFSQE
LGKSQELWKSQDLSGNLGGITTGTETPTPIGTPMESQDEVDFAMALQASSSSKGSKIFQN
IRPFGFNSVTQNLSFFNENDATTRTAKGKEVSIVENGVASYDEELSSVDHRKELDLGGGD
DKARNIKQWGKDWWWKQDGCGELCSKDYVKEWIGSQICPSTNPEWDLEKKCSPQKTSLDI
SAPLSKPEEVQETTLQEQEPETLKKESDKEITEKTCNKKPRKMKEWWKEEHLDELSKKSK
KAKRLESFCKKRFKIPHFDIGKRFRFKRKRKFGMQDENGDDPDAEFSFRKGWKRKHTRSM
GSDMWSGDLFSRELSSTTSMRGTLCYVAPEYGGCGYLMEKADIYSFGVLVLVIVSGRRPL
HVLNSPMKLEKANLVSWCKQLAHAGNVLELVDERLKDDYNKEQASLCINLALACLQKMPE
LRPDISDIVKILKGEMELPSLPFEFSPSPPSRTFSRSKRRHKSYAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400036692
Transcript Infomation

pacid=37460821 locus=PGSC0003DMG400014150 ID=PGSC0003DMT400036692.v4.03 annot-version=v4.03
Sequence

ATGACTTCAAGACAGCCAATTCCTTCAAATCCAAAACCCATGTCAGGCATAATTTTCCTC
ATCATTACAGTCTTAGCTTCACTTATAATCTTGTTTGCCATTCTTTATTTTCTTTACTAT
CTTTGGTATTCATTGGTGCATCGTTCTCGTACTAATCCTTATGATTCCAGTACACCCCTT
GTTAAGCTTCATAGGTTTTGTTACAAAGAGTTGAAGTCAGCAACTGAAGGTTTTAGTGAT
TCCACTTCTATTGGAAAAGGGGGATCTGGAACTGTATACAAAGGGATTCTTAAAGATGGG
AAATTGGTTGCTGTTAAGTTATTGGACTCTGGTTCATTTCAGAATGAAAGGGAGTTTCAG
AATGAACTTCAGATTCTTGGTGGGATAAAATCTCCTCTTGTAGTTTCTCTTCTTGGCTAT
TGTGTTGAGAGAAATAAAAGACTTGTTGTGTATGAGTATATGCCTAATAGAAGTTTACAA
GAATCCCTTTTTTCTGAGTCAAGTTTGTGTATGAATTGGGGTAGAAGGTTTGATGTCATT
CTTGATGTTGCTAGAGCATTGGCATTTTTGCATCTTGATTGTGACCCACCAGTGATTCAT
GGGGATGTTAAGCCTAGCAATGTGCTTCTTGATTCAGAGTATAAGGCTAAGCTTTCTGAT
TTTGGGTTGTCAAGATTGAAACTTGAGGAGGAATTTGGTGTGGATATGTTTAGTCAAGAA
TTGGGGAAGAGTCAGGAGTTGTGGAAAAGTCAAGACCTTTCTGGGAATTTAGGGGGGATC
ACTACAGGCACTGAGACTCCAACACCAATTGGGACACCTATGGAAAGTCAAGATGAGGTA
GATTTTGCTATGGCTTTACAAGCTTCTTCTTCTTCCAAAGGCAGTAAAATTTTCCAAAAT
ATTAGACCTTTTGGCTTTAATTCTGTTACTCAAAATTTGAGTTTTTTTAATGAGAATGAT
GCCACAACTAGGACTGCCAAGGGAAAGGAAGTGTCAATTGTTGAAAATGGTGTAGCAAGT
TATGATGAGGAGCTTAGTAGTGTTGATCATAGGAAAGAGTTGGATTTGGGTGGTGGAGAT
GATAAAGCAAGAAATATCAAACAATGGGGTAAAGATTGGTGGTGGAAACAGGATGGTTGT
GGTGAATTATGTAGCAAAGATTATGTAAAGGAGTGGATTGGAAGCCAGATTTGCCCATCA
ACTAATCCTGAGTGGGACTTAGAAAAGAAATGCTCACCCCAGAAAACCAGTTTAGATATT
TCAGCACCACTGAGTAAACCTGAGGAAGTGCAAGAAACCACATTACAAGAACAAGAGCCA
GAAACTCTCAAGAAAGAGTCCGATAAGGAGATAACGGAGAAAACGTGTAATAAGAAGCCT
AGGAAAATGAAAGAGTGGTGGAAAGAGGAGCATCTTGATGAACTAAGCAAGAAGAGTAAG
AAGGCCAAGAGACTAGAAAGTTTCTGTAAGAAGCGGTTCAAGATTCCACATTTTGATATT
GGTAAACGCTTTCGATTCAAGAGAAAGAGGAAATTCGGAATGCAGGATGAGAATGGAGAT
GATCCAGATGCAGAATTCAGTTTTAGGAAAGGTTGGAAGAGAAAGCATACGCGTTCAATG
GGGAGTGATATGTGGAGCGGTGATCTATTCAGTCGAGAGTTAAGCAGCACGACGAGCATG
AGAGGTACATTGTGCTATGTTGCACCAGAATATGGAGGGTGTGGTTACTTAATGGAAAAG
GCTGATATATACAGCTTTGGAGTTCTTGTCCTTGTGATAGTCTCTGGTAGGAGGCCATTA
CATGTCCTTAATTCGCCAATGAAACTCGAGAAAGCAAATCTGGTAAGCTGGTGTAAACAG
CTAGCTCATGCTGGAAATGTGTTAGAACTTGTTGATGAAAGACTAAAAGATGACTACAAC
AAAGAACAAGCAAGTCTCTGCATTAACTTGGCACTTGCTTGCTTACAAAAAATGCCCGAA
TTACGACCTGACATTAGTGACATTGTTAAGATTTTGAAAGGTGAGATGGAGTTACCATCC
CTCCCTTTTGAATTCTCTCCCTCCCCACCTTCGAGAACGTTCAGCAGATCAAAAAGACGA
CATAAGAGTTATGCAGAATAG