Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036570
CDS Infomation

pacid=37424972 polypeptide=PGSC0003DMP400024796 locus=PGSC0003DMG400014096 ID=PGSC0003DMT400036570.v4.03 annot-version=v4.03
Sequence

ATGGAGAGCTTTAGAAAAGCTTATGGGGCACTTAAAGATTCAACTAAAGTTGGCCTAGCC
AAGGTCAACAGTGAATTTAAGGATTTGGATATCGCGATTGTTAAAGCTACAAATCACGTT
GAAAGTCCTCCAAAAGAAAGGCATGTTGCAATGATATTTGCTGCAACATCGGTTACACGT
CCACGAGCAGATGTTGCCTACTGCATTCATGCACTCTCTAGACGGCTGGCAAAGACACGA
AACTGGATTGTTGCACTAAAGTCTTTGATAGTTATTCATAGAGTTTTGAGAGAAGGTGAT
CCTACATTTAAAGAAGAGTTGCTCCACTTCTCTCATAGAGGACACATTTTTCAAATATCG
AACTTTAAGGATGAATCCAGTCCACTTGCTTGGGATTGCTCTGCTTGGGTACGGACTTAT
GGACTCTTTCTAGAGGAAAGACTTGAGTGTTTTAGGAATTTGAAATATGATATCGATGGA
GAGAGATTGACTAAAACTACACCTGGAATTAACAAGGTGCATAGCAGAACAAGGCTCTTA
AATGGTGAAGAATTATTAAATCAGCTTCCTGCATTACAACAACTTCTGTATCGTTTGATT
GGTTGCCAGCCTGAAGGAGGAGCTTGCTACAACTTTCTTATTCAGTATGCCTTAGCACTG
GTTTTGAAGGAGAGCTTCAAGATCTATTGTGCAATCAATGATGGGATTATAAACCTTGTT
GATTTTTTCTTTGAAATGTCCAAGCATGATGCTATCAAAGCTCTCAACATATATAAAAGA
GCTGGGAAACAGGCTGAAAGTCTAGCTCATTTTTATGACTTCTGCAGAGGGTTGGATCTT
GCTCGGACATTTCAGTTTCCTGTTTTGAAACAGCCCCCTGCTTCCTTCCTAGCAACGATG
GAGGAATACATAAAAGAAGCACCTCAGACAGGTTCCATATCAAGTAGGAGGCTGGAGTAT
AGAGAAACAAAGAAAGAACCTGAAAAGCCTGTAGAACCAATCCTTGAAGAAATGGAAGAG
CAAGTTGAGAATGATAAAGAAGAAGAGGTCGAAGCGCAAGAGGAACCTCAGCCTGAAATT
CAATTAGAAGAAACTCCACCAACTGAAGAGCCTGTTGATTTGTTGGGTTTGAATCAAGTG
GATCCAAAAATTGCAGAATTAGAGGAAAGCAACGCGTTGGCTCTTGCAATTATTCAACCT
GGCAAAGAAAATCCATCAGCAAGTTTTCAGTTGAGTGAAATTGGAAGCACGTCTGGATGG
GAACTGGCTCTTGTTACTGCATCGAGCAACAACACCAGCCAAGTCGCACCAGATAAAAAA
TTGGCTGGGGGATTCGACAAGTTATTACTTGACAGCTTGTATGAAGATGATGCAACTAGG
AGGCAAATACAACTACAAAATGCTGGCTATAGTGCAGGATGCGGGTATGAAATCCCTGGC
CAGAATCCATTCAATCAACACGACCCCTTTGCCATGTCAAACAACATAGCACCTCCAACA
AATGTACAAATGGCAATAATGTCTCAGCAGCAACAGCAACAACAGCTACTACTCATGCAA
CACCACCACCACCAATTCCCACAGCAAAATATGATGATGGTATCACATAGTCAGTATCAA
GCTCAACAAATTCCATATATGGCCTCCGCAAACCCTTTTGGAGATCCCTTCTCCTATCAA
AGCACCTCAATTCCACCAAAGGGAAACCACTCACTTCTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400024796
PEP Infomation

pacid=37424972 transcript=PGSC0003DMT400036570 locus=PGSC0003DMG400014096 ID=PGSC0003DMT400036570.v4.03 annot-version=v4.03
Sequence

MESFRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVESPPKERHVAMIFAATSVTR
PRADVAYCIHALSRRLAKTRNWIVALKSLIVIHRVLREGDPTFKEELLHFSHRGHIFQIS
NFKDESSPLAWDCSAWVRTYGLFLEERLECFRNLKYDIDGERLTKTTPGINKVHSRTRLL
NGEELLNQLPALQQLLYRLIGCQPEGGACYNFLIQYALALVLKESFKIYCAINDGIINLV
DFFFEMSKHDAIKALNIYKRAGKQAESLAHFYDFCRGLDLARTFQFPVLKQPPASFLATM
EEYIKEAPQTGSISSRRLEYRETKKEPEKPVEPILEEMEEQVENDKEEEVEAQEEPQPEI
QLEETPPTEEPVDLLGLNQVDPKIAELEESNALALAIIQPGKENPSASFQLSEIGSTSGW
ELALVTASSNNTSQVAPDKKLAGGFDKLLLDSLYEDDATRRQIQLQNAGYSAGCGYEIPG
QNPFNQHDPFAMSNNIAPPTNVQMAIMSQQQQQQQLLLMQHHHHQFPQQNMMMVSHSQYQ
AQQIPYMASANPFGDPFSYQSTSIPPKGNHSLL*

Transcript Sequence

Transcript ID

PGSC0003DMT400036570
Transcript Infomation

pacid=37424972 locus=PGSC0003DMG400014096 ID=PGSC0003DMT400036570.v4.03 annot-version=v4.03
Sequence

ATGGAGAGCTTTAGAAAAGCTTATGGGGCACTTAAAGATTCAACTAAAGTTGGCCTAGCC
AAGGTCAACAGTGAATTTAAGGATTTGGATATCGCGATTGTTAAAGCTACAAATCACGTT
GAAAGTCCTCCAAAAGAAAGGCATGTTGCAATGATATTTGCTGCAACATCGGTTACACGT
CCACGAGCAGATGTTGCCTACTGCATTCATGCACTCTCTAGACGGCTGGCAAAGACACGA
AACTGGATTGTTGCACTAAAGTCTTTGATAGTTATTCATAGAGTTTTGAGAGAAGGTGAT
CCTACATTTAAAGAAGAGTTGCTCCACTTCTCTCATAGAGGACACATTTTTCAAATATCG
AACTTTAAGGATGAATCCAGTCCACTTGCTTGGGATTGCTCTGCTTGGGTACGGACTTAT
GGACTCTTTCTAGAGGAAAGACTTGAGTGTTTTAGGAATTTGAAATATGATATCGATGGA
GAGAGATTGACTAAAACTACACCTGGAATTAACAAGGTGCATAGCAGAACAAGGCTCTTA
AATGGTGAAGAATTATTAAATCAGCTTCCTGCATTACAACAACTTCTGTATCGTTTGATT
GGTTGCCAGCCTGAAGGAGGAGCTTGCTACAACTTTCTTATTCAGTATGCCTTAGCACTG
GTTTTGAAGGAGAGCTTCAAGATCTATTGTGCAATCAATGATGGGATTATAAACCTTGTT
GATTTTTTCTTTGAAATGTCCAAGCATGATGCTATCAAAGCTCTCAACATATATAAAAGA
GCTGGGAAACAGGCTGAAAGTCTAGCTCATTTTTATGACTTCTGCAGAGGGTTGGATCTT
GCTCGGACATTTCAGTTTCCTGTTTTGAAACAGCCCCCTGCTTCCTTCCTAGCAACGATG
GAGGAATACATAAAAGAAGCACCTCAGACAGGTTCCATATCAAGTAGGAGGCTGGAGTAT
AGAGAAACAAAGAAAGAACCTGAAAAGCCTGTAGAACCAATCCTTGAAGAAATGGAAGAG
CAAGTTGAGAATGATAAAGAAGAAGAGGTCGAAGCGCAAGAGGAACCTCAGCCTGAAATT
CAATTAGAAGAAACTCCACCAACTGAAGAGCCTGTTGATTTGTTGGGTTTGAATCAAGTG
GATCCAAAAATTGCAGAATTAGAGGAAAGCAACGCGTTGGCTCTTGCAATTATTCAACCT
GGCAAAGAAAATCCATCAGCAAGTTTTCAGTTGAGTGAAATTGGAAGCACGTCTGGATGG
GAACTGGCTCTTGTTACTGCATCGAGCAACAACACCAGCCAAGTCGCACCAGATAAAAAA
TTGGCTGGGGGATTCGACAAGTTATTACTTGACAGCTTGTATGAAGATGATGCAACTAGG
AGGCAAATACAACTACAAAATGCTGGCTATAGTGCAGGATGCGGGTATGAAATCCCTGGC
CAGAATCCATTCAATCAACACGACCCCTTTGCCATGTCAAACAACATAGCACCTCCAACA
AATGTACAAATGGCAATAATGTCTCAGCAGCAACAGCAACAACAGCTACTACTCATGCAA
CACCACCACCACCAATTCCCACAGCAAAATATGATGATGGTATCACATAGTCAGTATCAA
GCTCAACAAATTCCATATATGGCCTCCGCAAACCCTTTTGGAGATCCCTTCTCCTATCAA
AGCACCTCAATTCCACCAAAGGGAAACCACTCACTTCTTTAG