Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036532
CDS Infomation

pacid=37448179 polypeptide=PGSC0003DMP400024773 locus=PGSC0003DMG400014075 ID=PGSC0003DMT400036532.v4.03 annot-version=v4.03
Sequence

ATGGTTCGAGAGAAAGTAACAGTATCTACTCGGACACTACAGTGGAAGTGTGTTGAATCA
AGAACAGACAGTAAACGCCTTTATTATGGACGCTTTATTCTGTCTCCACTTATGAAAGGC
CAAGCCGACACAATAGGCATTGCGATGCGAAGAGCTTTACTTGGGGAAATAGAAGGAACA
TGTATCACACGTGTAAAATCTGAGAAAGTACCACATGAATATTCTACCATAACGGGCATT
CAAGAATCGGTACATGAAATTTTAATGAATTTGAAAGAGATTGTATTGAGAAGTAATTTA
TATGGAACTTCTGACGCGTCTATTTGTGTCAAGGGTCCTGGATATGTAACTGCTCAAGAT
ATCATCTTGCCACCTTATGTGGAAATCGTTGATAATACACAACATATAGCTAGTTTAACA
GAACCAATTGATTTTTGTATTGGATTACAAATAGAGAGAAATCGTGGATATCTTATAAAA
ACGCCACATAACTTTCAAGATGGAAGTTATCCTATAGATGCTGTATTCATGCCTGTTCGA
AACGCGAATCATAGTATTCATTCTTATGGGAATGGGAATGAAAAACAAGAGATACTTTTT
ATCGAAATATGGACAAATGGAAGTTTAACTCCGAAAGAAGCACTTCATGACGCATCCCGA
AATTTAATTGATTTATTTATTCCCTTTTTACATATGGAGGAAGACAACTTATATTTACAG
GACAATCAACACACGGTTCCTTTATCCCCTTTTACCTTTCATGATAAATTGGCTAAACTC
ATAAAAAACAAAAAAAAAATAGCATTGAAATCGATTTTTATTGACCAATCAGAATTGTCT
TCCAGGATCTATAATTGCCTCAAAATGTCCAATATATATACATTATTGGACCTTTTGAAT
AACAGCCAAGAAGATCTTATGAAAATTGAACATTTTCGTAGCGAAGATATAAAACAGATA
TTGGGCATTTTAGAAAAATATTTCGTAATTGATTTAGCAAAAAATAAGTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024773
PEP Infomation

pacid=37448179 transcript=PGSC0003DMT400036532 locus=PGSC0003DMG400014075 ID=PGSC0003DMT400036532.v4.03 annot-version=v4.03
Sequence

MVREKVTVSTRTLQWKCVESRTDSKRLYYGRFILSPLMKGQADTIGIAMRRALLGEIEGT
CITRVKSEKVPHEYSTITGIQESVHEILMNLKEIVLRSNLYGTSDASICVKGPGYVTAQD
IILPPYVEIVDNTQHIASLTEPIDFCIGLQIERNRGYLIKTPHNFQDGSYPIDAVFMPVR
NANHSIHSYGNGNEKQEILFIEIWTNGSLTPKEALHDASRNLIDLFIPFLHMEEDNLYLQ
DNQHTVPLSPFTFHDKLAKLIKNKKKIALKSIFIDQSELSSRIYNCLKMSNIYTLLDLLN
NSQEDLMKIEHFRSEDIKQILGILEKYFVIDLAKNKF*

Transcript Sequence

Transcript ID

PGSC0003DMT400036532
Transcript Infomation

pacid=37448179 locus=PGSC0003DMG400014075 ID=PGSC0003DMT400036532.v4.03 annot-version=v4.03
Sequence

ATGGTTCGAGAGAAAGTAACAGTATCTACTCGGACACTACAGTGGAAGTGTGTTGAATCA
AGAACAGACAGTAAACGCCTTTATTATGGACGCTTTATTCTGTCTCCACTTATGAAAGGC
CAAGCCGACACAATAGGCATTGCGATGCGAAGAGCTTTACTTGGGGAAATAGAAGGAACA
TGTATCACACGTGTAAAATCTGAGAAAGTACCACATGAATATTCTACCATAACGGGCATT
CAAGAATCGGTACATGAAATTTTAATGAATTTGAAAGAGATTGTATTGAGAAGTAATTTA
TATGGAACTTCTGACGCGTCTATTTGTGTCAAGGGTCCTGGATATGTAACTGCTCAAGAT
ATCATCTTGCCACCTTATGTGGAAATCGTTGATAATACACAACATATAGCTAGTTTAACA
GAACCAATTGATTTTTGTATTGGATTACAAATAGAGAGAAATCGTGGATATCTTATAAAA
ACGCCACATAACTTTCAAGATGGAAGTTATCCTATAGATGCTGTATTCATGCCTGTTCGA
AACGCGAATCATAGTATTCATTCTTATGGGAATGGGAATGAAAAACAAGAGATACTTTTT
ATCGAAATATGGACAAATGGAAGTTTAACTCCGAAAGAAGCACTTCATGACGCATCCCGA
AATTTAATTGATTTATTTATTCCCTTTTTACATATGGAGGAAGACAACTTATATTTACAG
GACAATCAACACACGGTTCCTTTATCCCCTTTTACCTTTCATGATAAATTGGCTAAACTC
ATAAAAAACAAAAAAAAAATAGCATTGAAATCGATTTTTATTGACCAATCAGAATTGTCT
TCCAGGATCTATAATTGCCTCAAAATGTCCAATATATATACATTATTGGACCTTTTGAAT
AACAGCCAAGAAGATCTTATGAAAATTGAACATTTTCGTAGCGAAGATATAAAACAGATA
TTGGGCATTTTAGAAAAATATTTCGTAATTGATTTAGCAAAAAATAAGTTTTAA