Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036487
CDS Infomation

pacid=37450231 polypeptide=PGSC0003DMP400024741 locus=PGSC0003DMG400014055 ID=PGSC0003DMT400036487.v4.03 annot-version=v4.03
Sequence

ATGGCTTGTTTTAAGAGTGCCATAGTTTTGTTTTTTCTAGTGAGTTTAGTGGGAAGTTCC
TCAGCTCAACTCACCACTGGATTTTACTCAAAATCATGTCCTAAGCTCTATGAAACTGTG
AAATCTGTGGTGAACTCTGCTATTCAGAAGGAAACCCGAATGGGTGCTTCCCTCCTTCGC
CTATTCTTCCACGATTGCTTCGTTAATGGATGCGATGGATCATTGTTCCTGGATGATACA
TCAACCTTCACAGGGGAAAAGAGGGCACAGCCAAATTTCAATTCGGCCAGAGGATTTGAA
GTTATTGACAACATCAAATCTGCTGTCGAAAAAGTGTGCCCTGGTGTCGTCTCTTGTGCT
GATATTTTGGCCGTTACCGCCCGAGACTCTGTTGTAATTCTTGGAGGACCTAATTGGGAT
GTAAAACTGGGAAGAAGAGATGCCAGGACGGCAAGCCAAGGTGCTGCCAATAACAGCATT
CCTACCCCAACTTCTAACCTTAACCGTCTCATCTCTAGCTTCAGTGCTGTTGGCCTTTCT
ACAAAGGATATGGTTGCCTTATCTGGAGCTCATACTATCGGACAAGCAAGGTGCACAAGT
TTCAGGGGACGCATATACAACGAGACCAAAAACATGGACGCATCACTAGCGCGAACCAGG
CAAAATAATTGCCCGAGAGCCTCAGGATCAGGGGACAACAATTTGGCACCTCTTGATTTA
CAGACTCCTACGCGCTTCGACAATCACTATTTCATAAACCTTGTTAACAAAAAGGGACTG
CTCCATTCTGATCAGCAGCTTTTCAATGGAGGATCCGTCGATTCAATTGTCAAATCATAC
AGTAACAATCCCAGCAGTTTCACCTCTGATTTTGTGACCGCAATGATTAAGATGGGTGAT
AACCGTCCCCTCACTGGATCTAAGGGAGAGATCAGGAAGAACTGCAGGAGAATCAACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024741
PEP Infomation

pacid=37450231 transcript=PGSC0003DMT400036487 locus=PGSC0003DMG400014055 ID=PGSC0003DMT400036487.v4.03 annot-version=v4.03
Sequence

MACFKSAIVLFFLVSLVGSSSAQLTTGFYSKSCPKLYETVKSVVNSAIQKETRMGASLLR
LFFHDCFVNGCDGSLFLDDTSTFTGEKRAQPNFNSARGFEVIDNIKSAVEKVCPGVVSCA
DILAVTARDSVVILGGPNWDVKLGRRDARTASQGAANNSIPTPTSNLNRLISSFSAVGLS
TKDMVALSGAHTIGQARCTSFRGRIYNETKNMDASLARTRQNNCPRASGSGDNNLAPLDL
QTPTRFDNHYFINLVNKKGLLHSDQQLFNGGSVDSIVKSYSNNPSSFTSDFVTAMIKMGD
NRPLTGSKGEIRKNCRRIN*

Transcript Sequence

Transcript ID

PGSC0003DMT400036487
Transcript Infomation

pacid=37450231 locus=PGSC0003DMG400014055 ID=PGSC0003DMT400036487.v4.03 annot-version=v4.03
Sequence

ATGGCTTGTTTTAAGAGTGCCATAGTTTTGTTTTTTCTAGTGAGTTTAGTGGGAAGTTCC
TCAGCTCAACTCACCACTGGATTTTACTCAAAATCATGTCCTAAGCTCTATGAAACTGTG
AAATCTGTGGTGAACTCTGCTATTCAGAAGGAAACCCGAATGGGTGCTTCCCTCCTTCGC
CTATTCTTCCACGATTGCTTCGTTAATGGATGCGATGGATCATTGTTCCTGGATGATACA
TCAACCTTCACAGGGGAAAAGAGGGCACAGCCAAATTTCAATTCGGCCAGAGGATTTGAA
GTTATTGACAACATCAAATCTGCTGTCGAAAAAGTGTGCCCTGGTGTCGTCTCTTGTGCT
GATATTTTGGCCGTTACCGCCCGAGACTCTGTTGTAATTCTTGGAGGACCTAATTGGGAT
GTAAAACTGGGAAGAAGAGATGCCAGGACGGCAAGCCAAGGTGCTGCCAATAACAGCATT
CCTACCCCAACTTCTAACCTTAACCGTCTCATCTCTAGCTTCAGTGCTGTTGGCCTTTCT
ACAAAGGATATGGTTGCCTTATCTGGAGCTCATACTATCGGACAAGCAAGGTGCACAAGT
TTCAGGGGACGCATATACAACGAGACCAAAAACATGGACGCATCACTAGCGCGAACCAGG
CAAAATAATTGCCCGAGAGCCTCAGGATCAGGGGACAACAATTTGGCACCTCTTGATTTA
CAGACTCCTACGCGCTTCGACAATCACTATTTCATAAACCTTGTTAACAAAAAGGGACTG
CTCCATTCTGATCAGCAGCTTTTCAATGGAGGATCCGTCGATTCAATTGTCAAATCATAC
AGTAACAATCCCAGCAGTTTCACCTCTGATTTTGTGACCGCAATGATTAAGATGGGTGAT
AACCGTCCCCTCACTGGATCTAAGGGAGAGATCAGGAAGAACTGCAGGAGAATCAACTAA