Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036436
CDS Infomation

pacid=37464012 polypeptide=PGSC0003DMP400024707 locus=PGSC0003DMG400014030 ID=PGSC0003DMT400036436.v4.03 annot-version=v4.03
Sequence

ATGGCGGTTCCGACGATAGCACTGTACGCAAGTCCGCCGAGTAGTGTGTGTTCTACACCA
TATCAATGCCACTCTCACGCTTCTTATGATTTCGATTTGAACGGCAGATCATCGTCGTCT
TCCTCATCGACATCCTCTTCGTCCCAGAAATCCATTGTCGGTGGCCTGTCGTCTCTGTTC
TCTTCGCCAACCGTGAAGGCCAGCTATTCAACTGGAACCGAGGATTTGGGGTCTCTGTGG
CATGATAGAGGCGACGAATTGAGTAGCTCTTTTCGTTGTTCATCCCTCAGCTCGTCATTG
AAAAGGGATCATCAGAGTCCAGTTTCTGTGTTTCAAGGGCCTGTTTCATGTAGCACTAGT
AGTAGTGGAATTGGATCATATTCCAGAAGTCCTCCGAAGAGAATTGCTGGGGATGTCTGT
TCCATTCGTTCTGGGACTGGTGGATTGTTTAATGGTTTTGTTAGGCACGCCTTGGGATCC
TGTGTTGATCACGATCCGGTGGCTTTTCAGGTCCTGGATGTTGATTCCCGTTCATCAGGG
CTATTGGATGAACTCACCTTTAACATGGAAGAAGGTTTCTTAGAGTCCAATTCAGAACCT
TATGCTAAAACTTTACTGTTGGGTGCACAGGCAAGGCATAAAATCTTTTATGATGATTTT
GTGGTGAAGGCATTTTATGAAGCTGAGAAAGCCCATAGAGGACAGGTGCGAGCTACTGGT
GATCCTTATCTACAGCATTGCGTTGAGACTGCAGTTTTACTCGCAACGATTGGGGCTAAC
TCGACTGTTGTTGCTGCTGGACTTTTGCACGACACACTTGATGACACATTCATGACTTAT
GACTATATATTCCGGACGCTAGGAGCTGGTGTTGCTGATCTGGTTGAAGGGGTGTCAAAG
CTTAGTCAATTGAGCAAGCTTGCACGAGACTTCGATACAGCCAGTAAAACTGTTGAGGCA
GATCGATTACACACCATGTTCCTTGCTATGACAGATGCAAGGGCTGTTCTCATAAAGCTA
GCTGATCGTTTGCATAATATGATTACTTTGGATGCATTACCATCTACAAAGCAGCAAAGA
TTTGCAAAGGAAACTTTGGAAATTTTTGCTCCTCTTGCTAATCGCCTAGGCATCTCAACC
TGGAAAGAGCAGCTGGAGAACCAATGCTTTAAACATCTTAACCCGGATCAGCACAATGAA
CTCTCATCAAAACTCATGGATTCTTTTGACGAGGCTATGATTACCTCTGCCGTGGAGAAA
TTGGAGCAAGCGTTAAGTGATGGATCTGTTTCTTATCACGTACTTTCAGGGCGTCACAAG
AGCTTGTACAGCATTTACTGCAAGATGCTAAAGAAGAAGCTTAATATGGATGAAGTCCAT
GACATTCATGGGTTGAGGTTGATTGTTGAAAATGAGGAGGACTGCTATAAAGCACTTCAA
GTTGTTCACCAGCTATGGCGCGAGGTACCTGGGAGATACAAGGACTACATAGAAAAACCC
AAATGCAATGGGTACCAATCTCTTCACACAGTTGTTCTCGGGGAAGGCATGGCGCCTCTT
GAAGTTCAGATCCGAACAAAAGAGATGCACTTGCAAGCTGAATATGGCTTTGCCGCTCAT
TGGAGATACAAAGAAAATGACTGCAAACACTCCTCTTTTGTTCTTCAGATGGTAGAGTGG
GCTCGTTGGGTTGTAACCTGGCAGTGCGAGACAATGAGCAGAGACCAGTCATCTGTTGGC
CACACTGAATCGATTCAGCCACCTTGCAAATTCCCAGCTCATTCTGAAGATTGTCCCTTT
TCTTGCAAACCTGATTGTGGAACCGATGGGCCTGTCTTTATCATTATGATTGAGAACGAT
AAGGTCTGTATCTACCTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024707
PEP Infomation

pacid=37464012 transcript=PGSC0003DMT400036436 locus=PGSC0003DMG400014030 ID=PGSC0003DMT400036436.v4.03 annot-version=v4.03
Sequence

MAVPTIALYASPPSSVCSTPYQCHSHASYDFDLNGRSSSSSSSTSSSSQKSIVGGLSSLF
SSPTVKASYSTGTEDLGSLWHDRGDELSSSFRCSSLSSSLKRDHQSPVSVFQGPVSCSTS
SSGIGSYSRSPPKRIAGDVCSIRSGTGGLFNGFVRHALGSCVDHDPVAFQVLDVDSRSSG
LLDELTFNMEEGFLESNSEPYAKTLLLGAQARHKIFYDDFVVKAFYEAEKAHRGQVRATG
DPYLQHCVETAVLLATIGANSTVVAAGLLHDTLDDTFMTYDYIFRTLGAGVADLVEGVSK
LSQLSKLARDFDTASKTVEADRLHTMFLAMTDARAVLIKLADRLHNMITLDALPSTKQQR
FAKETLEIFAPLANRLGISTWKEQLENQCFKHLNPDQHNELSSKLMDSFDEAMITSAVEK
LEQALSDGSVSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLRLIVENEEDCYKALQ
VVHQLWREVPGRYKDYIEKPKCNGYQSLHTVVLGEGMAPLEVQIRTKEMHLQAEYGFAAH
WRYKENDCKHSSFVLQMVEWARWVVTWQCETMSRDQSSVGHTESIQPPCKFPAHSEDCPF
SCKPDCGTDGPVFIIMIENDKVCIYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400036436
Transcript Infomation

pacid=37464012 locus=PGSC0003DMG400014030 ID=PGSC0003DMT400036436.v4.03 annot-version=v4.03
Sequence

ATGGCGGTTCCGACGATAGCACTGTACGCAAGTCCGCCGAGTAGTGTGTGTTCTACACCA
TATCAATGCCACTCTCACGCTTCTTATGATTTCGATTTGAACGGCAGATCATCGTCGTCT
TCCTCATCGACATCCTCTTCGTCCCAGAAATCCATTGTCGGTGGCCTGTCGTCTCTGTTC
TCTTCGCCAACCGTGAAGGCCAGCTATTCAACTGGAACCGAGGATTTGGGGTCTCTGTGG
CATGATAGAGGCGACGAATTGAGTAGCTCTTTTCGTTGTTCATCCCTCAGCTCGTCATTG
AAAAGGGATCATCAGAGTCCAGTTTCTGTGTTTCAAGGGCCTGTTTCATGTAGCACTAGT
AGTAGTGGAATTGGATCATATTCCAGAAGTCCTCCGAAGAGAATTGCTGGGGATGTCTGT
TCCATTCGTTCTGGGACTGGTGGATTGTTTAATGGTTTTGTTAGGCACGCCTTGGGATCC
TGTGTTGATCACGATCCGGTGGCTTTTCAGGTCCTGGATGTTGATTCCCGTTCATCAGGG
CTATTGGATGAACTCACCTTTAACATGGAAGAAGGTTTCTTAGAGTCCAATTCAGAACCT
TATGCTAAAACTTTACTGTTGGGTGCACAGGCAAGGCATAAAATCTTTTATGATGATTTT
GTGGTGAAGGCATTTTATGAAGCTGAGAAAGCCCATAGAGGACAGGTGCGAGCTACTGGT
GATCCTTATCTACAGCATTGCGTTGAGACTGCAGTTTTACTCGCAACGATTGGGGCTAAC
TCGACTGTTGTTGCTGCTGGACTTTTGCACGACACACTTGATGACACATTCATGACTTAT
GACTATATATTCCGGACGCTAGGAGCTGGTGTTGCTGATCTGGTTGAAGGGGTGTCAAAG
CTTAGTCAATTGAGCAAGCTTGCACGAGACTTCGATACAGCCAGTAAAACTGTTGAGGCA
GATCGATTACACACCATGTTCCTTGCTATGACAGATGCAAGGGCTGTTCTCATAAAGCTA
GCTGATCGTTTGCATAATATGATTACTTTGGATGCATTACCATCTACAAAGCAGCAAAGA
TTTGCAAAGGAAACTTTGGAAATTTTTGCTCCTCTTGCTAATCGCCTAGGCATCTCAACC
TGGAAAGAGCAGCTGGAGAACCAATGCTTTAAACATCTTAACCCGGATCAGCACAATGAA
CTCTCATCAAAACTCATGGATTCTTTTGACGAGGCTATGATTACCTCTGCCGTGGAGAAA
TTGGAGCAAGCGTTAAGTGATGGATCTGTTTCTTATCACGTACTTTCAGGGCGTCACAAG
AGCTTGTACAGCATTTACTGCAAGATGCTAAAGAAGAAGCTTAATATGGATGAAGTCCAT
GACATTCATGGGTTGAGGTTGATTGTTGAAAATGAGGAGGACTGCTATAAAGCACTTCAA
GTTGTTCACCAGCTATGGCGCGAGGTACCTGGGAGATACAAGGACTACATAGAAAAACCC
AAATGCAATGGGTACCAATCTCTTCACACAGTTGTTCTCGGGGAAGGCATGGCGCCTCTT
GAAGTTCAGATCCGAACAAAAGAGATGCACTTGCAAGCTGAATATGGCTTTGCCGCTCAT
TGGAGATACAAAGAAAATGACTGCAAACACTCCTCTTTTGTTCTTCAGATGGTAGAGTGG
GCTCGTTGGGTTGTAACCTGGCAGTGCGAGACAATGAGCAGAGACCAGTCATCTGTTGGC
CACACTGAATCGATTCAGCCACCTTGCAAATTCCCAGCTCATTCTGAAGATTGTCCCTTT
TCTTGCAAACCTGATTGTGGAACCGATGGGCCTGTCTTTATCATTATGATTGAGAACGAT
AAGGTCTGTATCTACCTGTGA