Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036366
CDS Infomation

pacid=37429483 polypeptide=PGSC0003DMP400024661 locus=PGSC0003DMG400013995 ID=PGSC0003DMT400036366.v4.03 annot-version=v4.03
Sequence

ATGGCACCATGTTTATCTGTACTCTTTCTTGCTTTATTTGTTGTTTTTCTCTCTTCTCGT
GTTCTTTCCCTTTCTTCATCCCATAATGAGGATGAGTTTATGTTATCTTCTGCTAAATTC
CCTGTACCAATGGCAGAAAAACTCATCAAACAACTTAATTTGTTCCCTAAACATGATATC
AACAAGGCTTCATCATCACCCTTAGCAGCAACTCATCAGCAAACTCTCTTTGAGAAGAGA
TTCAATTTATCTTATCTTGGTGATTCTGGGGCCACTGTTCAAGATTTGGGTCATCATGCC
GGTTATTATCGTCTTCCACATACTAAAGATGCAAGGATGTTTTATTTCTTTTTTGAATCA
AGAAGCAGCCAGAATGATCCAGTTGTTATATGGCTAACAGGGGGGCCAGGATGTAGCAGT
GAATTGGCTGTGTTTTATGAAAATGGACCTTTCAATATAGCAGACAATATGTCACTTGTT
TGGAATAATTTTGGCTGGGACAAGATCTCAAACTTAATATACGTTGATCAACCAACTGGA
ACTGGTTTCAGTTATACATCAGATGATGATGACATTCGTCACGATGAAAGGGGTGTTAGC
AATGACCTTTACGACTTCTTGCAGGCTTTCTTCAAGGCACATCCTCAGTATGTAAAGAAT
GATTTTTACATAACTGGAGAATCATATGCTGGGCATTACATTCCTGCATTTGCTTCTCGC
GTTCATCAAGGTAACAAGAATAAAGACGGAATTCCTATAAATCTTAAGGGATTTGCCATT
GGTAATGGACTCACTAATCCAGAAATTCAGTACAAAGCCTACACTGACTATGCATTGGAT
ATGAGATTGATCAAACAATCTGATTACAATGTCATTGACAAGTCATATCCAAAATGTCAA
CAGGCAATTAAGCTTTGTGGAACTGATGGTGGAAGTGCTTGCATGGCGGCATATCTTGTT
TGCACAAGTATCTTCAACAAGATAATGAATGTTGTGGGTAACAAAAATTACTATGATGTC
AGAAAGACTTGTGATGGTGATCTCTGCTATGACTTCTCCAACATGGAAAATCTCCTCAAT
GATGAACAGGTTAAACATGCCCTTGGTGTCGGGGATATTGAGTTTGTGTCGTGTAGTTCT
ACAGTTTACCAGGCAATGCAGTTGGATTGGATGAGGAATCTTGAAGCTGGTATTCCTCCA
CTCCTTGAAGATGGAATCAAGCTACTTGTCTATGCCGGGGAATATGATCTTATCTGCAAC
TGGCTAGGGAACTCGAGGTGGGTGCATGCAATGGAATGGTCTGGACAGAAAGATTTTAGG
GCAGCACGATCGGTTCCTTTTACAGTAGATGGTGAAGAGAAAGGAATTGAAAAGAACCAC
GGGCCTGTAACATTCCTTAGGGTCCATGATGCAGGACACATGGTTCCAATGGATCAACCT
AAGGCAGCACTTGAAATGCTGCAGAGATGGATGCAAGGGAAATTGTCTAAGGAAGGTCAC
TTTGCTCATATGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400024661
PEP Infomation

pacid=37429483 transcript=PGSC0003DMT400036366 locus=PGSC0003DMG400013995 ID=PGSC0003DMT400036366.v4.03 annot-version=v4.03
Sequence

MAPCLSVLFLALFVVFLSSRVLSLSSSHNEDEFMLSSAKFPVPMAEKLIKQLNLFPKHDI
NKASSSPLAATHQQTLFEKRFNLSYLGDSGATVQDLGHHAGYYRLPHTKDARMFYFFFES
RSSQNDPVVIWLTGGPGCSSELAVFYENGPFNIADNMSLVWNNFGWDKISNLIYVDQPTG
TGFSYTSDDDDIRHDERGVSNDLYDFLQAFFKAHPQYVKNDFYITGESYAGHYIPAFASR
VHQGNKNKDGIPINLKGFAIGNGLTNPEIQYKAYTDYALDMRLIKQSDYNVIDKSYPKCQ
QAIKLCGTDGGSACMAAYLVCTSIFNKIMNVVGNKNYYDVRKTCDGDLCYDFSNMENLLN
DEQVKHALGVGDIEFVSCSSTVYQAMQLDWMRNLEAGIPPLLEDGIKLLVYAGEYDLICN
WLGNSRWVHAMEWSGQKDFRAARSVPFTVDGEEKGIEKNHGPVTFLRVHDAGHMVPMDQP
KAALEMLQRWMQGKLSKEGHFAHM*

Transcript Sequence

Transcript ID

PGSC0003DMT400036366
Transcript Infomation

pacid=37429483 locus=PGSC0003DMG400013995 ID=PGSC0003DMT400036366.v4.03 annot-version=v4.03
Sequence

ATGGCACCATGTTTATCTGTACTCTTTCTTGCTTTATTTGTTGTTTTTCTCTCTTCTCGT
GTTCTTTCCCTTTCTTCATCCCATAATGAGGATGAGTTTATGTTATCTTCTGCTAAATTC
CCTGTACCAATGGCAGAAAAACTCATCAAACAACTTAATTTGTTCCCTAAACATGATATC
AACAAGGCTTCATCATCACCCTTAGCAGCAACTCATCAGCAAACTCTCTTTGAGAAGAGA
TTCAATTTATCTTATCTTGGTGATTCTGGGGCCACTGTTCAAGATTTGGGTCATCATGCC
GGTTATTATCGTCTTCCACATACTAAAGATGCAAGGATGTTTTATTTCTTTTTTGAATCA
AGAAGCAGCCAGAATGATCCAGTTGTTATATGGCTAACAGGGGGGCCAGGATGTAGCAGT
GAATTGGCTGTGTTTTATGAAAATGGACCTTTCAATATAGCAGACAATATGTCACTTGTT
TGGAATAATTTTGGCTGGGACAAGATCTCAAACTTAATATACGTTGATCAACCAACTGGA
ACTGGTTTCAGTTATACATCAGATGATGATGACATTCGTCACGATGAAAGGGGTGTTAGC
AATGACCTTTACGACTTCTTGCAGGCTTTCTTCAAGGCACATCCTCAGTATGTAAAGAAT
GATTTTTACATAACTGGAGAATCATATGCTGGGCATTACATTCCTGCATTTGCTTCTCGC
GTTCATCAAGGTAACAAGAATAAAGACGGAATTCCTATAAATCTTAAGGGATTTGCCATT
GGTAATGGACTCACTAATCCAGAAATTCAGTACAAAGCCTACACTGACTATGCATTGGAT
ATGAGATTGATCAAACAATCTGATTACAATGTCATTGACAAGTCATATCCAAAATGTCAA
CAGGCAATTAAGCTTTGTGGAACTGATGGTGGAAGTGCTTGCATGGCGGCATATCTTGTT
TGCACAAGTATCTTCAACAAGATAATGAATGTTGTGGGTAACAAAAATTACTATGATGTC
AGAAAGACTTGTGATGGTGATCTCTGCTATGACTTCTCCAACATGGAAAATCTCCTCAAT
GATGAACAGGTTAAACATGCCCTTGGTGTCGGGGATATTGAGTTTGTGTCGTGTAGTTCT
ACAGTTTACCAGGCAATGCAGTTGGATTGGATGAGGAATCTTGAAGCTGGTATTCCTCCA
CTCCTTGAAGATGGAATCAAGCTACTTGTCTATGCCGGGGAATATGATCTTATCTGCAAC
TGGCTAGGGAACTCGAGGTGGGTGCATGCAATGGAATGGTCTGGACAGAAAGATTTTAGG
GCAGCACGATCGGTTCCTTTTACAGTAGATGGTGAAGAGAAAGGAATTGAAAAGAACCAC
GGGCCTGTAACATTCCTTAGGGTCCATGATGCAGGACACATGGTTCCAATGGATCAACCT
AAGGCAGCACTTGAAATGCTGCAGAGATGGATGCAAGGGAAATTGTCTAAGGAAGGTCAC
TTTGCTCATATGTAG