Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036343
CDS Infomation

pacid=37463964 polypeptide=PGSC0003DMP400024644 locus=PGSC0003DMG400013981 ID=PGSC0003DMT400036343.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAGAGAAGGAGGTGATGTCTCATGTTATTTCCAATCCCTCTTTTGAAGTTGAA
GTTCCTGAAACTCTTCATCAGATTGGCCAAGATTCATGGTTTCAGGTGGGACTTGTTCTC
ACGACTACTGTCAATTGTGCGTATGCACTAGGATATGCTGGCACAATCATGGTTCCTCTG
GGTTGGATTGGTGGTGTGACTGGTATGGTTTTATCTACAATCATATCATTATATGCCAGT
ACCCTTATGGCAAAGATCCATCAATATGGAGAAAAAAGGCATATCAGATATAGAGATCTT
GCAGGATTTATGTATGGATACAGAGCTTATGTCATTGTTTGGGGATTACAGTATGCAAAT
CTTTTCTTGATAAATATTGGATTCATCATTTTGGGTGGACAAGCCTTAAAGGCTTTCTAT
CTTCTCTTTAGGGAGGATCATGAGATGAAGCTTCCATACTTCATCATAATCGCAGGATTA
GCGTGCGTGATTTTCGCTGTTTCTGTGCCCCATTTGTCAGCTCTAGGTGTTTGGATGGCA
GTTTCCACATTCCTCAGTATAGTGTATTTCTCAATAGCCTTTGCTTTGTGTCTTAAAGAT
GGTATTAATGCTCCTCCTAGGGACTATAGCATTCCAGGATCCTCCTCTAGTAGAGCTTTT
ACAACTATTGGTGCAGCTGCAAGTCTTGTTTTTGTATACAACACAGGAATGATCCCAGAG
ATCCAGGCTACTGTAAGAGCACCTGTTGTTGACAACATGTTGAAAGCCCTGTATTTTCAG
TTTACTATAGGAGTTGTGCCGGTGCATGCTGTTACTTACATGGGGTATTGGGCGTATGGA
TCTAAATCATCATCTTATTTGCTCTACAATGTCAGTGGCCCTGTTTGGCTGAGGGGATTA
GCCAACATTGCTGCTTTCTTCCAATCCATCATTACGTTGCACATATTTGCAAGTCCAACA
TACGAGTATTTGGATACTAAATATAGAATAAGTGGAAGTGTATTGGCTTTTCGGAACCTG
TCATTCAGAACAGTAGTTAGAGGTGGTTATCTAGCGATTACCATTTTTCTATCTGCTCTG
TTACCTTTTCTTGGAGATTTCATGAGCTTCACCGGTGCTATCAGTACAATTCCACTCACA
TTTATTCTTCCAAATCACATGTACATTGTTGCTATGAGGAAGCAAATTTCGTCATTACAA
AAGAGCTGGCACTGGTTCAACATTCTCTTCTTTAGTTGTATAGCTGTTGCTGCATTAGTT
GCTTCTGTAAGACTTATTGCCATGGACTCAAAAACTTACCATGCGTTCGCAGATTTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400024644
PEP Infomation

pacid=37463964 transcript=PGSC0003DMT400036343 locus=PGSC0003DMG400013981 ID=PGSC0003DMT400036343.v4.03 annot-version=v4.03
Sequence

MGEEKEVMSHVISNPSFEVEVPETLHQIGQDSWFQVGLVLTTTVNCAYALGYAGTIMVPL
GWIGGVTGMVLSTIISLYASTLMAKIHQYGEKRHIRYRDLAGFMYGYRAYVIVWGLQYAN
LFLINIGFIILGGQALKAFYLLFREDHEMKLPYFIIIAGLACVIFAVSVPHLSALGVWMA
VSTFLSIVYFSIAFALCLKDGINAPPRDYSIPGSSSSRAFTTIGAAASLVFVYNTGMIPE
IQATVRAPVVDNMLKALYFQFTIGVVPVHAVTYMGYWAYGSKSSSYLLYNVSGPVWLRGL
ANIAAFFQSIITLHIFASPTYEYLDTKYRISGSVLAFRNLSFRTVVRGGYLAITIFLSAL
LPFLGDFMSFTGAISTIPLTFILPNHMYIVAMRKQISSLQKSWHWFNILFFSCIAVAALV
ASVRLIAMDSKTYHAFADL*

Transcript Sequence

Transcript ID

PGSC0003DMT400036343
Transcript Infomation

pacid=37463964 locus=PGSC0003DMG400013981 ID=PGSC0003DMT400036343.v4.03 annot-version=v4.03
Sequence

ATGGGAGAAGAGAAGGAGGTGATGTCTCATGTTATTTCCAATCCCTCTTTTGAAGTTGAA
GTTCCTGAAACTCTTCATCAGATTGGCCAAGATTCATGGTTTCAGGTGGGACTTGTTCTC
ACGACTACTGTCAATTGTGCGTATGCACTAGGATATGCTGGCACAATCATGGTTCCTCTG
GGTTGGATTGGTGGTGTGACTGGTATGGTTTTATCTACAATCATATCATTATATGCCAGT
ACCCTTATGGCAAAGATCCATCAATATGGAGAAAAAAGGCATATCAGATATAGAGATCTT
GCAGGATTTATGTATGGATACAGAGCTTATGTCATTGTTTGGGGATTACAGTATGCAAAT
CTTTTCTTGATAAATATTGGATTCATCATTTTGGGTGGACAAGCCTTAAAGGCTTTCTAT
CTTCTCTTTAGGGAGGATCATGAGATGAAGCTTCCATACTTCATCATAATCGCAGGATTA
GCGTGCGTGATTTTCGCTGTTTCTGTGCCCCATTTGTCAGCTCTAGGTGTTTGGATGGCA
GTTTCCACATTCCTCAGTATAGTGTATTTCTCAATAGCCTTTGCTTTGTGTCTTAAAGAT
GGTATTAATGCTCCTCCTAGGGACTATAGCATTCCAGGATCCTCCTCTAGTAGAGCTTTT
ACAACTATTGGTGCAGCTGCAAGTCTTGTTTTTGTATACAACACAGGAATGATCCCAGAG
ATCCAGGCTACTGTAAGAGCACCTGTTGTTGACAACATGTTGAAAGCCCTGTATTTTCAG
TTTACTATAGGAGTTGTGCCGGTGCATGCTGTTACTTACATGGGGTATTGGGCGTATGGA
TCTAAATCATCATCTTATTTGCTCTACAATGTCAGTGGCCCTGTTTGGCTGAGGGGATTA
GCCAACATTGCTGCTTTCTTCCAATCCATCATTACGTTGCACATATTTGCAAGTCCAACA
TACGAGTATTTGGATACTAAATATAGAATAAGTGGAAGTGTATTGGCTTTTCGGAACCTG
TCATTCAGAACAGTAGTTAGAGGTGGTTATCTAGCGATTACCATTTTTCTATCTGCTCTG
TTACCTTTTCTTGGAGATTTCATGAGCTTCACCGGTGCTATCAGTACAATTCCACTCACA
TTTATTCTTCCAAATCACATGTACATTGTTGCTATGAGGAAGCAAATTTCGTCATTACAA
AAGAGCTGGCACTGGTTCAACATTCTCTTCTTTAGTTGTATAGCTGTTGCTGCATTAGTT
GCTTCTGTAAGACTTATTGCCATGGACTCAAAAACTTACCATGCGTTCGCAGATTTATAA