Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036154
CDS Infomation

pacid=37431709 polypeptide=PGSC0003DMP400024550 locus=PGSC0003DMG402013921 ID=PGSC0003DMT400036154.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTTGTGGTTCAAGGACTCATATTGGCCATTTCGTTGGCAATATGACTGCTAGG
CGCCTGCAGTGTAGTTTGTCAGTAAAGAGTTGTACTGTTTCTTACAACAAAAGAGGCTTT
CAAAATGTTAGTAAAGCTAACATCAGTTTGGGAAACAAAGGACGGCCCAATAACTTCATG
CTTTACCAATATTTCACGACTAATGTTGCAAAGAGGAGGACTAACCTCCATCCACACAAA
GGCTTTGGATTGGAAGGTTTTCACAATTTATCCCATGAATGTTTCTTTTCTGGAACTGCC
TCTGCTTCTAATGTGTCTTCTGATAATTCTAAGGGCACGGAACAAGTTGTGGATGTTGTT
AATTCTTCTGAAGCAAAGATCCCCTTGCAGCTAGACTCGGGATCCTTTTACCTACCTCAT
CCTGCTAAAGCAAAAACTGGTGGAGAGGATGCTCATTTTATTTGTACCCTTACACCAGCA
ATCGGTGTAGCTGATGGTGTTGGTGGATGGGCAGATCTTGGTATTGATGCTGGACTATAT
GCTCGTGAATTGATGTCTCACTCTTTATCTGCAATTAAAGATGAACCAAAAGGTTCTGTA
GACCTAATCAGGGTGCTGGAGAAAGCTTACGTGAGAACAAAAGCAAAAGGCTCTTCTACA
GCGTGTATCGTTGCACTCACTGAAGGGGGTCTTTATGCAGTTAATTTAGGAGATAGCGGA
TTTATGTTGGTTAGAAATGGTTGTGCTGCATTTAAATCCCCTTCACAACAGCATGGGTTT
AATTTCCCATATCAACTAGATTGCAGTAACACAGGTGATTCACCTAGCTCCACCATGGTG
TTCAAAATTACTGCTCTACCTGGAGATGTCCTAATTGTCAGTACAGATGGGCTTTTTGAT
AATTTGTATGATGAATATATCAGTGGAGTTGTATTTCAGGCCATGGAAGCTGGCTTAGGT
CCTCAGATGACTGCTCAGCGGATAGCAGAACTTGCACAACTAAGAGCAATGGATCATACT
AAGTCTTCGCCTTTCTCTGATGGAGCTCGTGAGGCTGGATTTGATTACCATGGTGGGAAG
CTGGACGACATCACTGTAGTTGTTTCTTACATAACAGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024550
PEP Infomation

pacid=37431709 transcript=PGSC0003DMT400036154 locus=PGSC0003DMG402013921 ID=PGSC0003DMT400036154.v4.03 annot-version=v4.03
Sequence

MAVCGSRTHIGHFVGNMTARRLQCSLSVKSCTVSYNKRGFQNVSKANISLGNKGRPNNFM
LYQYFTTNVAKRRTNLHPHKGFGLEGFHNLSHECFFSGTASASNVSSDNSKGTEQVVDVV
NSSEAKIPLQLDSGSFYLPHPAKAKTGGEDAHFICTLTPAIGVADGVGGWADLGIDAGLY
ARELMSHSLSAIKDEPKGSVDLIRVLEKAYVRTKAKGSSTACIVALTEGGLYAVNLGDSG
FMLVRNGCAAFKSPSQQHGFNFPYQLDCSNTGDSPSSTMVFKITALPGDVLIVSTDGLFD
NLYDEYISGVVFQAMEAGLGPQMTAQRIAELAQLRAMDHTKSSPFSDGAREAGFDYHGGK
LDDITVVVSYITE*

Transcript Sequence

Transcript ID

PGSC0003DMT400036154
Transcript Infomation

pacid=37431709 locus=PGSC0003DMG402013921 ID=PGSC0003DMT400036154.v4.03 annot-version=v4.03
Sequence

ATGGCTGTTTGTGGTTCAAGGACTCATATTGGCCATTTCGTTGGCAATATGACTGCTAGG
CGCCTGCAGTGTAGTTTGTCAGTAAAGAGTTGTACTGTTTCTTACAACAAAAGAGGCTTT
CAAAATGTTAGTAAAGCTAACATCAGTTTGGGAAACAAAGGACGGCCCAATAACTTCATG
CTTTACCAATATTTCACGACTAATGTTGCAAAGAGGAGGACTAACCTCCATCCACACAAA
GGCTTTGGATTGGAAGGTTTTCACAATTTATCCCATGAATGTTTCTTTTCTGGAACTGCC
TCTGCTTCTAATGTGTCTTCTGATAATTCTAAGGGCACGGAACAAGTTGTGGATGTTGTT
AATTCTTCTGAAGCAAAGATCCCCTTGCAGCTAGACTCGGGATCCTTTTACCTACCTCAT
CCTGCTAAAGCAAAAACTGGTGGAGAGGATGCTCATTTTATTTGTACCCTTACACCAGCA
ATCGGTGTAGCTGATGGTGTTGGTGGATGGGCAGATCTTGGTATTGATGCTGGACTATAT
GCTCGTGAATTGATGTCTCACTCTTTATCTGCAATTAAAGATGAACCAAAAGGTTCTGTA
GACCTAATCAGGGTGCTGGAGAAAGCTTACGTGAGAACAAAAGCAAAAGGCTCTTCTACA
GCGTGTATCGTTGCACTCACTGAAGGGGGTCTTTATGCAGTTAATTTAGGAGATAGCGGA
TTTATGTTGGTTAGAAATGGTTGTGCTGCATTTAAATCCCCTTCACAACAGCATGGGTTT
AATTTCCCATATCAACTAGATTGCAGTAACACAGGTGATTCACCTAGCTCCACCATGGTG
TTCAAAATTACTGCTCTACCTGGAGATGTCCTAATTGTCAGTACAGATGGGCTTTTTGAT
AATTTGTATGATGAATATATCAGTGGAGTTGTATTTCAGGCCATGGAAGCTGGCTTAGGT
CCTCAGATGACTGCTCAGCGGATAGCAGAACTTGCACAACTAAGAGCAATGGATCATACT
AAGTCTTCGCCTTTCTCTGATGGAGCTCGTGAGGCTGGATTTGATTACCATGGTGGGAAG
CTGGACGACATCACTGTAGTTGTTTCTTACATAACAGAGTAA