Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036146
CDS Infomation

pacid=37433432 polypeptide=PGSC0003DMP400024544 locus=PGSC0003DMG402013919 ID=PGSC0003DMT400036146.v4.03 annot-version=v4.03
Sequence

ATGGCATTTTTGGGTCTTTCTGTTCAATCTTCCCCTTTTAAACCCACTTCTTATGTTTGG
TTTTCTCCTCATTCTTTCTCCTCTCGCACTTTTTGGGCTTCTTCTGGTAAAGCCCTACAC
AGGGGGGAAGATTGCAAAACTCGGAGTATAGAAAATGCATCTTCCAGCTTAGCTGTGCTT
GGCGATCCCATTAAACAAATATCAAGTCATGAAAGGAAGTTATTCTCTAGTGGATTACAA
CAGAAAATTGAAGAAGACAGTATTTACGGATGGAATGCTGAAATTGATGCTATTAAAGCT
CTTAAAGCAAAAAGCGCCTATAATAGTTATAAAAAGATTTCAGCGGCAAATTGCAGTGTT
AGCGCCTCCACAAATCGGAAGGTGAAAGATGAAAATTTTGATGTTCCAATTGAAGTCAAT
ACGAGAATGATGCGTGAGCGTGTCACCTCTAGCTATTCTGCTACAACCTGTATTTCAGGA
GGCAGCTTATCTTCAAAAAGCAAACCACCTTATAACCCTAATAGAGGAGAGAAGAAAGAC
GTTGGAAACTGGAGAGAGTATAAAAACCATTTGCCTCAACTATCTGTAGGTATCAACCAT
TCAAGAAACAATGAAGTCACATCAATAAATAAGGTTGATGGTCCTAATGTATCTCATTAC
AAACCATTGTCAAAAGGTTCCCTTCTTAATGGGCAATTGTCGAGCAAAATTATGGAAGCC
AAATTGGAAAAAGCAAATAAACTTTGGGAGGGTAATCCATCTAATCAAATAAGAGACAGT
GTGAATGGGACTGATACCAAGGTGGTTACTGTCAAAGCAAAAAGTGTTATCCAGGAGCCA
GCAACTAATAAAAGGGAAAAGAATGCAATTAAATCCGTGGCAACTGATTTTGTGAATGGG
ACTGAGACTAAGATTGTCAGTGATGAAGGAACAGGTTTAGGTCAGATTACCCTCCGTGAG
AGGCTGGGTGCAATGTATGAAAAAGTGCATATAGTTGACAATTTATCAGCAGCCAAGGAA
GTTGTCAGCAAACTTACAAGTCAGTACAAGCATCTCGTCCATGCATGTGATACAGAGGTA
GCGAATATTGATGTTAAGCAGCAAACACCTGTTGATCATGGAGAAGTTATATGCTTCAGT
ATTTATTCTGGACCAGAGGCTGATTTTGGTGATGGGAAATCTTGTATCTGGGTAGATGTT
CTTGATGGAGGTGGCAAGGACCTATTAGTCGAATTTGCTCCGTTTTTCCAAGACCCATCC
ATCAGAAAGGTCTGGCACAATTATAGCTTCGACAAGCACGTCATAGAAAATTATGGGTTT
AAAGTATCTGGTTTTCATGCTGACACGATGCACATGGCACGACTTTGGGATTCCTCTAGA
CGAATTTTGGGTGGTTATTCATTAGAGGCACTAACAGGTGATTCTCATGTCATGTGTGAT
GCTAGACTGGTCCATGCTGAAAGGCTGTTCCATGATGAAGGTCTGTTTGGTAAAATATCT
ATGAAAACTATCTTTGGTCGGAAAAAGCTGAAGAAAGATGGAACTGAGGGTAAAGTAACC
ATGATTCCTTCTGTCGAAGAGTTGCAAAGGACTGAACGAGAATTGTGGATTTGTTATTCT
GCATTAGACTCCATCAGCACATTGATGCTTTATGAGAGCTTGAAGAAAAAACTATCTAAA
CGGATCTGGACATTCGATGGAGTTCGTAAAGGATCCATGTATGAATTTTATGAGAAATAC
TGGCGTCCATTTGGTGAGCTTCTAGTTCAAATGGAAACTGAGGGTGTGCTGGTTGACCGT
GCCTATCTTGCTGAGATTGAGAAAGTGGCTAAAGCTGAGCAGCTGGTTGCTGTGAATAGA
TTTCGTAACTGGGCAGCTAAGTACTGTGCTGATGCAAAGTACATGAATGTTGGAAGTGAC
ACACAGTTGCGTCAACTGTTTTTTGGTGGCATCCAGAATAGAAGGAATGTTGATGAGAGT
CTACCAAATGAGAAAGAATTCAAAGTTCCGAATGTAGATAAAGTAATTGAAGAAGGAAAG
AAGGCTCCCACCAAATTTCGTAAAATCCATCTACATAGGATTTGTGATCCTATCAACACT
GAGATTTTCACTGCCAGTGGTTGGCCTTCTGTTAGTGGAGATGCTTTGAAGGCTCTCGCT
GGCAAAGTTTCTGCAGACTTTGATATTTTTGATGAAGTGGATGGCAATGCTGAGGAAGTT
CCTGAAACAAGCGTTGATGAAGCTTTAACTACAAATAACGAATCTCTCAGTCAAAACCCA
GAAAATTCAGCTTATGGAACAGCCTACCACGCCTTTGGAGGTGGGCAGAAAGGAATTGAG
TCTTGCCATGCCATTGCAGCCTTATGTGAAGTTTGCTCCATAGACTCTTTAATATCCAAC
TTTATCCTCCCCTTGCAGGGTCATGACGTGTCAGGTGAAAATGGACGGATTCATTGCTCC
CTGAATATTAATACTGAAACTGGGCGCTTGTCTGCAAGGAGACCAAATTTACAGAACCAG
CCTGCTCTGGAGAAAGATAGGTATAAAATTCGCCAAGCTTTTGTAGCTGCAGAGGGGAAT
TCCTTGATTGTGGCTGACTATGGGCAGTTGGAACTAAGGATTCTTGCACATCTTGCCAAC
TGTAAGAGCATGTTGGGTGCATTCAAAGCTGGTGGAGACTTCCATTCAAGGACTGCTATG
AATATGTATCCTCACATCCGTGAAGCCGTTGAAAAAGGGCAGGTACTTCTTGAGTGGCAT
CCTGAACCAGGTGAAGACAAACCACCAGTTCCTCTGCTAAAGGATGCTTTTGGCTCTGAA
AGAAGGAAGGCAAAGATGCTCAATTTTTCAATTGCGTACGGAAAAACTACAATTGGACTC
TCACGCGATTGGAAGGTATCTGTAAAGGAAGCAAAGGAAACAGTTGAACGTTGGTATAGT
GATAGAAAAGAAGTGTCAGATTGGCAGGAACAACGCAGATTTGAAGCACGCGAGTTTGGA
CGTGTTCACACACTTCTAGGACGAGCACGCTGGTTTCCGTCAGTAAAAAATGCAACTGGA
TCCGTAAAAGGTCACATAGAACGGGCTGCTATCAATACTCCAGTGCAGGGAAGTGCTGCA
GATGTCGCTATGTGCGCCATGTTAGAGATATCAAAGAATGCACGACTAAAGGAGCTTGGA
TGGAAATTGCTTTTACAGGTTCATGATGAAGTTATTTTGGAAGGACCGGAAGAATCTGAA
AAAGAAGCCATGGCAATAGTGGTTCACTGCATGTCCAATCCTTTTAATGGGAAAAATATT
CTCAGAGTTGGCTTATCTGTCGATGCTAAATGTGCTAAAAACTGGTATTCTGCCAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400024544
PEP Infomation

pacid=37433432 transcript=PGSC0003DMT400036146 locus=PGSC0003DMG402013919 ID=PGSC0003DMT400036146.v4.03 annot-version=v4.03
Sequence

MAFLGLSVQSSPFKPTSYVWFSPHSFSSRTFWASSGKALHRGEDCKTRSIENASSSLAVL
GDPIKQISSHERKLFSSGLQQKIEEDSIYGWNAEIDAIKALKAKSAYNSYKKISAANCSV
SASTNRKVKDENFDVPIEVNTRMMRERVTSSYSATTCISGGSLSSKSKPPYNPNRGEKKD
VGNWREYKNHLPQLSVGINHSRNNEVTSINKVDGPNVSHYKPLSKGSLLNGQLSSKIMEA
KLEKANKLWEGNPSNQIRDSVNGTDTKVVTVKAKSVIQEPATNKREKNAIKSVATDFVNG
TETKIVSDEGTGLGQITLRERLGAMYEKVHIVDNLSAAKEVVSKLTSQYKHLVHACDTEV
ANIDVKQQTPVDHGEVICFSIYSGPEADFGDGKSCIWVDVLDGGGKDLLVEFAPFFQDPS
IRKVWHNYSFDKHVIENYGFKVSGFHADTMHMARLWDSSRRILGGYSLEALTGDSHVMCD
ARLVHAERLFHDEGLFGKISMKTIFGRKKLKKDGTEGKVTMIPSVEELQRTERELWICYS
ALDSISTLMLYESLKKKLSKRIWTFDGVRKGSMYEFYEKYWRPFGELLVQMETEGVLVDR
AYLAEIEKVAKAEQLVAVNRFRNWAAKYCADAKYMNVGSDTQLRQLFFGGIQNRRNVDES
LPNEKEFKVPNVDKVIEEGKKAPTKFRKIHLHRICDPINTEIFTASGWPSVSGDALKALA
GKVSADFDIFDEVDGNAEEVPETSVDEALTTNNESLSQNPENSAYGTAYHAFGGGQKGIE
SCHAIAALCEVCSIDSLISNFILPLQGHDVSGENGRIHCSLNINTETGRLSARRPNLQNQ
PALEKDRYKIRQAFVAAEGNSLIVADYGQLELRILAHLANCKSMLGAFKAGGDFHSRTAM
NMYPHIREAVEKGQVLLEWHPEPGEDKPPVPLLKDAFGSERRKAKMLNFSIAYGKTTIGL
SRDWKVSVKEAKETVERWYSDRKEVSDWQEQRRFEAREFGRVHTLLGRARWFPSVKNATG
SVKGHIERAAINTPVQGSAADVAMCAMLEISKNARLKELGWKLLLQVHDEVILEGPEESE
KEAMAIVVHCMSNPFNGKNILRVGLSVDAKCAKNWYSAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400036146
Transcript Infomation

pacid=37433432 locus=PGSC0003DMG402013919 ID=PGSC0003DMT400036146.v4.03 annot-version=v4.03
Sequence

ATGGCATTTTTGGGTCTTTCTGTTCAATCTTCCCCTTTTAAACCCACTTCTTATGTTTGG
TTTTCTCCTCATTCTTTCTCCTCTCGCACTTTTTGGGCTTCTTCTGGTAAAGCCCTACAC
AGGGGGGAAGATTGCAAAACTCGGAGTATAGAAAATGCATCTTCCAGCTTAGCTGTGCTT
GGCGATCCCATTAAACAAATATCAAGTCATGAAAGGAAGTTATTCTCTAGTGGATTACAA
CAGAAAATTGAAGAAGACAGTATTTACGGATGGAATGCTGAAATTGATGCTATTAAAGCT
CTTAAAGCAAAAAGCGCCTATAATAGTTATAAAAAGATTTCAGCGGCAAATTGCAGTGTT
AGCGCCTCCACAAATCGGAAGGTGAAAGATGAAAATTTTGATGTTCCAATTGAAGTCAAT
ACGAGAATGATGCGTGAGCGTGTCACCTCTAGCTATTCTGCTACAACCTGTATTTCAGGA
GGCAGCTTATCTTCAAAAAGCAAACCACCTTATAACCCTAATAGAGGAGAGAAGAAAGAC
GTTGGAAACTGGAGAGAGTATAAAAACCATTTGCCTCAACTATCTGTAGGTATCAACCAT
TCAAGAAACAATGAAGTCACATCAATAAATAAGGTTGATGGTCCTAATGTATCTCATTAC
AAACCATTGTCAAAAGGTTCCCTTCTTAATGGGCAATTGTCGAGCAAAATTATGGAAGCC
AAATTGGAAAAAGCAAATAAACTTTGGGAGGGTAATCCATCTAATCAAATAAGAGACAGT
GTGAATGGGACTGATACCAAGGTGGTTACTGTCAAAGCAAAAAGTGTTATCCAGGAGCCA
GCAACTAATAAAAGGGAAAAGAATGCAATTAAATCCGTGGCAACTGATTTTGTGAATGGG
ACTGAGACTAAGATTGTCAGTGATGAAGGAACAGGTTTAGGTCAGATTACCCTCCGTGAG
AGGCTGGGTGCAATGTATGAAAAAGTGCATATAGTTGACAATTTATCAGCAGCCAAGGAA
GTTGTCAGCAAACTTACAAGTCAGTACAAGCATCTCGTCCATGCATGTGATACAGAGGTA
GCGAATATTGATGTTAAGCAGCAAACACCTGTTGATCATGGAGAAGTTATATGCTTCAGT
ATTTATTCTGGACCAGAGGCTGATTTTGGTGATGGGAAATCTTGTATCTGGGTAGATGTT
CTTGATGGAGGTGGCAAGGACCTATTAGTCGAATTTGCTCCGTTTTTCCAAGACCCATCC
ATCAGAAAGGTCTGGCACAATTATAGCTTCGACAAGCACGTCATAGAAAATTATGGGTTT
AAAGTATCTGGTTTTCATGCTGACACGATGCACATGGCACGACTTTGGGATTCCTCTAGA
CGAATTTTGGGTGGTTATTCATTAGAGGCACTAACAGGTGATTCTCATGTCATGTGTGAT
GCTAGACTGGTCCATGCTGAAAGGCTGTTCCATGATGAAGGTCTGTTTGGTAAAATATCT
ATGAAAACTATCTTTGGTCGGAAAAAGCTGAAGAAAGATGGAACTGAGGGTAAAGTAACC
ATGATTCCTTCTGTCGAAGAGTTGCAAAGGACTGAACGAGAATTGTGGATTTGTTATTCT
GCATTAGACTCCATCAGCACATTGATGCTTTATGAGAGCTTGAAGAAAAAACTATCTAAA
CGGATCTGGACATTCGATGGAGTTCGTAAAGGATCCATGTATGAATTTTATGAGAAATAC
TGGCGTCCATTTGGTGAGCTTCTAGTTCAAATGGAAACTGAGGGTGTGCTGGTTGACCGT
GCCTATCTTGCTGAGATTGAGAAAGTGGCTAAAGCTGAGCAGCTGGTTGCTGTGAATAGA
TTTCGTAACTGGGCAGCTAAGTACTGTGCTGATGCAAAGTACATGAATGTTGGAAGTGAC
ACACAGTTGCGTCAACTGTTTTTTGGTGGCATCCAGAATAGAAGGAATGTTGATGAGAGT
CTACCAAATGAGAAAGAATTCAAAGTTCCGAATGTAGATAAAGTAATTGAAGAAGGAAAG
AAGGCTCCCACCAAATTTCGTAAAATCCATCTACATAGGATTTGTGATCCTATCAACACT
GAGATTTTCACTGCCAGTGGTTGGCCTTCTGTTAGTGGAGATGCTTTGAAGGCTCTCGCT
GGCAAAGTTTCTGCAGACTTTGATATTTTTGATGAAGTGGATGGCAATGCTGAGGAAGTT
CCTGAAACAAGCGTTGATGAAGCTTTAACTACAAATAACGAATCTCTCAGTCAAAACCCA
GAAAATTCAGCTTATGGAACAGCCTACCACGCCTTTGGAGGTGGGCAGAAAGGAATTGAG
TCTTGCCATGCCATTGCAGCCTTATGTGAAGTTTGCTCCATAGACTCTTTAATATCCAAC
TTTATCCTCCCCTTGCAGGGTCATGACGTGTCAGGTGAAAATGGACGGATTCATTGCTCC
CTGAATATTAATACTGAAACTGGGCGCTTGTCTGCAAGGAGACCAAATTTACAGAACCAG
CCTGCTCTGGAGAAAGATAGGTATAAAATTCGCCAAGCTTTTGTAGCTGCAGAGGGGAAT
TCCTTGATTGTGGCTGACTATGGGCAGTTGGAACTAAGGATTCTTGCACATCTTGCCAAC
TGTAAGAGCATGTTGGGTGCATTCAAAGCTGGTGGAGACTTCCATTCAAGGACTGCTATG
AATATGTATCCTCACATCCGTGAAGCCGTTGAAAAAGGGCAGGTACTTCTTGAGTGGCAT
CCTGAACCAGGTGAAGACAAACCACCAGTTCCTCTGCTAAAGGATGCTTTTGGCTCTGAA
AGAAGGAAGGCAAAGATGCTCAATTTTTCAATTGCGTACGGAAAAACTACAATTGGACTC
TCACGCGATTGGAAGGTATCTGTAAAGGAAGCAAAGGAAACAGTTGAACGTTGGTATAGT
GATAGAAAAGAAGTGTCAGATTGGCAGGAACAACGCAGATTTGAAGCACGCGAGTTTGGA
CGTGTTCACACACTTCTAGGACGAGCACGCTGGTTTCCGTCAGTAAAAAATGCAACTGGA
TCCGTAAAAGGTCACATAGAACGGGCTGCTATCAATACTCCAGTGCAGGGAAGTGCTGCA
GATGTCGCTATGTGCGCCATGTTAGAGATATCAAAGAATGCACGACTAAAGGAGCTTGGA
TGGAAATTGCTTTTACAGGTTCATGATGAAGTTATTTTGGAAGGACCGGAAGAATCTGAA
AAAGAAGCCATGGCAATAGTGGTTCACTGCATGTCCAATCCTTTTAATGGGAAAAATATT
CTCAGAGTTGGCTTATCTGTCGATGCTAAATGTGCTAAAAACTGGTATTCTGCCAAGTAG