Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036091
CDS Infomation

pacid=37447621 polypeptide=PGSC0003DMP400024517 locus=PGSC0003DMG400013900 ID=PGSC0003DMT400036091.v4.03 annot-version=v4.03
Sequence

ATGCCAAGCAAGTTAAAGAAAGCAATTGGTGCAGTAAAAGATCAAACAAGCATTAGCCTT
GCAAAAGTTTCAAGCAATACTTCTTCAACTCTTGAAGTTGCTGTCTTAAAAGCCACAACA
CATGATGATGTACCTATCGATGATCGATACGTTCAAGAAGTCATCAAACTTGTCTCATCA
AACAAGGCCTACGCGGCTGCCTGTGCTCGTGCCATTGGCAAACGCATAGGCAGAACGAGG
AACTGGATCGTTGCCCTCAAATCATTGATGCTTGTCTTAAGAATCTTCCAAGATGGTGAT
CCTTACTTCCCTCGAGAGATCCTTCATGCTATGAAACGTGGAGCCAAGATTCTTAATCTT
TCTAGTTTTCGCGATGATTCAAATTCTAGTCCTTGGGATTTCACAGCATTTGTTCGTACA
TTTGCTTTGTATCTTGATGAACGTCTGGATTGTTTCCTTACTGGAAAGCTTCAAAGAAGA
TACAATAATCGCGAAAGAGAGAATTCAAGTAGCCATATTTATAGGTCTACTGGTAGTAGT
CGAAGAAGGGGTGATGAACCTGTTCGTGACATGAAACCAGTAATGCTGCTTGACAAGATA
TCGTATTGGCAACGATTGATTGAAAGAGCAATAGCTACAAGACCAACAGGAGCAGCTAAG
ACAAATCGTCTTGTCCAAATCGCGTTGTATGCTGTTGTAACAGAGAGTTTTGATCTTTAC
AAAGATATCTCAGATGGTCTTGCACTTGTTCTTGATAGCTTCTTCCATTTACCATATCAA
TCATGCGTAAACGCCTTCCAAACTTGTGTCAAAGCTGCTAAACAATTCGAGGAGATCAGT
GCGTTTTACTCTGTCTGTAAAACTATAGGCGTTGGCAGGACATCAGAATATCCAAGTGTG
CAAACAATCTCAGAGGAATTGATCGAAACGTTGCAAGAGTTCCTCAAGGATCAATCTTCA
TTTCCAGCTCATACACAAAGCAAACCACATTTGCTTCTTCCAGGCACCGGTGGTGGTTCC
TCAAGGACCACGAGCAGCAAACGTGATAGTTATGGTTGTCAATCAGACTTTTCTGTGACC
ACAGGCACGACTGAGCCATACTCGGAGAAGAGTACTAATACTTGTGTTGATTCGCGTTGC
ACATCATTAGAAGATCTAATAAGTGCAACAGAAACATGGAAGAGTCCAGCTAATATTTCA
ATTGATTTGGAGGCCTATTCAGATATTCAATTTGAGAAGCAGTTGCATGAAAAGGATGAC
TCGGGGTCTACTCATTCGTTGCCCGTATCAAACTCCATGGCTGATCTTGTATCCTTACCA
GATTTGCAAGAATATGATGAAGACGACGAGAAAAAACAAGAAGCTGAACTTGAACAACAC
CAGAAACAGAATCCATCATTAGATTCTACTAGTTCAGCTAAAGGATGGGAACTCGTGTTA
ACTGAGGCGATCCCATCAACATCCTTCAACGCGTTCCCTGAGCAACCAAAACCGGATCAT
TTGTCAAGAAACGAAATGAGAGGGGTAATAACACCATCAGCATCATTCAACGCGTTCCCT
GAACAAGGACAAGAAAATGTACCTACAAATGAAGCAGAGGTTTCTTCAAGCAATGGATGG
GAACTCGTACTATTCGAAAACATTCCACAAGCACAATCAACACAACCCGTTGTCCCTAGT
ACCACGAACAACAACAATGTTAACAGCTTCAGTTTCGCCACTTTGGATGACTTGTACAAT
CAGAATCAAACGCCATTTTATCCGAATAATAGCCAAAACTCACATTTCACCCCTAGTACA
AACAACTTTTTGTATGATCAAACTCCAGCACCTCAACACTACAATCCATTTTTACAAGAC
ACATCAATGGAGTTGGCTATGGTACCGGTTACTGGTGCACCTGCCCCATACCCAACTCTG
ACCACGAATTCTTCGTTTTCATTTCCAACGTCTACTGACATGTTCACATCATCAGCACCT
ACATTTCAAGCAACTCCAACTTTTAGTGCTCAGAATCATACTACAGGGCCAATGCAGAGT
ACTAATATGGACGACCCGTTCGCGACATTTTCGAGTAGTGATCAGATGTTTAATGGCATC
AAGAATGAGCAGAATTTGATGCAAGAACAACAATTATGGTTGCAGAACCAAAACAAAATC
ATAGCTAAACATAGGGCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024517
PEP Infomation

pacid=37447621 transcript=PGSC0003DMT400036091 locus=PGSC0003DMG400013900 ID=PGSC0003DMT400036091.v4.03 annot-version=v4.03
Sequence

MPSKLKKAIGAVKDQTSISLAKVSSNTSSTLEVAVLKATTHDDVPIDDRYVQEVIKLVSS
NKAYAAACARAIGKRIGRTRNWIVALKSLMLVLRIFQDGDPYFPREILHAMKRGAKILNL
SSFRDDSNSSPWDFTAFVRTFALYLDERLDCFLTGKLQRRYNNRERENSSSHIYRSTGSS
RRRGDEPVRDMKPVMLLDKISYWQRLIERAIATRPTGAAKTNRLVQIALYAVVTESFDLY
KDISDGLALVLDSFFHLPYQSCVNAFQTCVKAAKQFEEISAFYSVCKTIGVGRTSEYPSV
QTISEELIETLQEFLKDQSSFPAHTQSKPHLLLPGTGGGSSRTTSSKRDSYGCQSDFSVT
TGTTEPYSEKSTNTCVDSRCTSLEDLISATETWKSPANISIDLEAYSDIQFEKQLHEKDD
SGSTHSLPVSNSMADLVSLPDLQEYDEDDEKKQEAELEQHQKQNPSLDSTSSAKGWELVL
TEAIPSTSFNAFPEQPKPDHLSRNEMRGVITPSASFNAFPEQGQENVPTNEAEVSSSNGW
ELVLFENIPQAQSTQPVVPSTTNNNNVNSFSFATLDDLYNQNQTPFYPNNSQNSHFTPST
NNFLYDQTPAPQHYNPFLQDTSMELAMVPVTGAPAPYPTLTTNSSFSFPTSTDMFTSSAP
TFQATPTFSAQNHTTGPMQSTNMDDPFATFSSSDQMFNGIKNEQNLMQEQQLWLQNQNKI
IAKHRA*

Transcript Sequence

Transcript ID

PGSC0003DMT400036091
Transcript Infomation

pacid=37447621 locus=PGSC0003DMG400013900 ID=PGSC0003DMT400036091.v4.03 annot-version=v4.03
Sequence

ATGCCAAGCAAGTTAAAGAAAGCAATTGGTGCAGTAAAAGATCAAACAAGCATTAGCCTT
GCAAAAGTTTCAAGCAATACTTCTTCAACTCTTGAAGTTGCTGTCTTAAAAGCCACAACA
CATGATGATGTACCTATCGATGATCGATACGTTCAAGAAGTCATCAAACTTGTCTCATCA
AACAAGGCCTACGCGGCTGCCTGTGCTCGTGCCATTGGCAAACGCATAGGCAGAACGAGG
AACTGGATCGTTGCCCTCAAATCATTGATGCTTGTCTTAAGAATCTTCCAAGATGGTGAT
CCTTACTTCCCTCGAGAGATCCTTCATGCTATGAAACGTGGAGCCAAGATTCTTAATCTT
TCTAGTTTTCGCGATGATTCAAATTCTAGTCCTTGGGATTTCACAGCATTTGTTCGTACA
TTTGCTTTGTATCTTGATGAACGTCTGGATTGTTTCCTTACTGGAAAGCTTCAAAGAAGA
TACAATAATCGCGAAAGAGAGAATTCAAGTAGCCATATTTATAGGTCTACTGGTAGTAGT
CGAAGAAGGGGTGATGAACCTGTTCGTGACATGAAACCAGTAATGCTGCTTGACAAGATA
TCGTATTGGCAACGATTGATTGAAAGAGCAATAGCTACAAGACCAACAGGAGCAGCTAAG
ACAAATCGTCTTGTCCAAATCGCGTTGTATGCTGTTGTAACAGAGAGTTTTGATCTTTAC
AAAGATATCTCAGATGGTCTTGCACTTGTTCTTGATAGCTTCTTCCATTTACCATATCAA
TCATGCGTAAACGCCTTCCAAACTTGTGTCAAAGCTGCTAAACAATTCGAGGAGATCAGT
GCGTTTTACTCTGTCTGTAAAACTATAGGCGTTGGCAGGACATCAGAATATCCAAGTGTG
CAAACAATCTCAGAGGAATTGATCGAAACGTTGCAAGAGTTCCTCAAGGATCAATCTTCA
TTTCCAGCTCATACACAAAGCAAACCACATTTGCTTCTTCCAGGCACCGGTGGTGGTTCC
TCAAGGACCACGAGCAGCAAACGTGATAGTTATGGTTGTCAATCAGACTTTTCTGTGACC
ACAGGCACGACTGAGCCATACTCGGAGAAGAGTACTAATACTTGTGTTGATTCGCGTTGC
ACATCATTAGAAGATCTAATAAGTGCAACAGAAACATGGAAGAGTCCAGCTAATATTTCA
ATTGATTTGGAGGCCTATTCAGATATTCAATTTGAGAAGCAGTTGCATGAAAAGGATGAC
TCGGGGTCTACTCATTCGTTGCCCGTATCAAACTCCATGGCTGATCTTGTATCCTTACCA
GATTTGCAAGAATATGATGAAGACGACGAGAAAAAACAAGAAGCTGAACTTGAACAACAC
CAGAAACAGAATCCATCATTAGATTCTACTAGTTCAGCTAAAGGATGGGAACTCGTGTTA
ACTGAGGCGATCCCATCAACATCCTTCAACGCGTTCCCTGAGCAACCAAAACCGGATCAT
TTGTCAAGAAACGAAATGAGAGGGGTAATAACACCATCAGCATCATTCAACGCGTTCCCT
GAACAAGGACAAGAAAATGTACCTACAAATGAAGCAGAGGTTTCTTCAAGCAATGGATGG
GAACTCGTACTATTCGAAAACATTCCACAAGCACAATCAACACAACCCGTTGTCCCTAGT
ACCACGAACAACAACAATGTTAACAGCTTCAGTTTCGCCACTTTGGATGACTTGTACAAT
CAGAATCAAACGCCATTTTATCCGAATAATAGCCAAAACTCACATTTCACCCCTAGTACA
AACAACTTTTTGTATGATCAAACTCCAGCACCTCAACACTACAATCCATTTTTACAAGAC
ACATCAATGGAGTTGGCTATGGTACCGGTTACTGGTGCACCTGCCCCATACCCAACTCTG
ACCACGAATTCTTCGTTTTCATTTCCAACGTCTACTGACATGTTCACATCATCAGCACCT
ACATTTCAAGCAACTCCAACTTTTAGTGCTCAGAATCATACTACAGGGCCAATGCAGAGT
ACTAATATGGACGACCCGTTCGCGACATTTTCGAGTAGTGATCAGATGTTTAATGGCATC
AAGAATGAGCAGAATTTGATGCAAGAACAACAATTATGGTTGCAGAACCAAAACAAAATC
ATAGCTAAACATAGGGCTTGA