Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036087
CDS Infomation

pacid=37447901 polypeptide=PGSC0003DMP400024515 locus=PGSC0003DMG400013898 ID=PGSC0003DMT400036087.v4.03 annot-version=v4.03
Sequence

ATGACAACTTCTCACAGTACCTTCCTTTACATTCTACTTGTGCTTCTTCTTTTTTCACTT
CCATTCACAATTACATCATCAGCAACAACTGAAGCTGAAGCTCTTGTCAAATGGAAGATG
AACTTATCTTCTGCTTCTTTCTTGGATTCATGGTCCATTTCGAATCTCGGAAACTTGTGC
AATTGGACATCTATTGTCTGCAATGCTGGTGGAACAATTTCCGATATCAATCTTTCTGAT
GCAGGCCTCTCAGGCACTCTTGATCAGCTTGACTTCACTTCATTTCCGAGTCTCACAAGT
TTTTCTCTCAATGGCAACAACTTAAGTGGATCGATACCATCAAATATTGGCAATGCTTCT
ATGCTCACTTTCTTGGACCTGAGCAACAATATCTTGGAGGGTGTCATACCAGAAGAGATT
GAGAAGTTAACACAACTTGAATATCTCAGTTTCTATAACAACAATATCATTGATGTTATT
CCCTACCAAATAAGTAATCTTCAGAAGGTATGGCACTTGGATCTTGGATCAAATTTTTTA
GAAACTCCTGATTGGTCCAAATTGAGGAATATGCCTATGTTGACATATTTGAGCTTTGGT
TATAATGAACTAACATTAGAATTCCCTGAATTTGTACTCCGTTGCCATAATCTGACTTAC
CTCGATTTGTCGATAAACCATTTGAATGGTTCAATACCAGAAACACTATTCACCAACTTG
GATAAGCTTGAACAACTCAATCTTTCATCTAATTCATTTCAAGGTTCATTGTCACCAAAT
TTTACCAAGTTGACCAAGTTAAAAGAACTTCAGCTTGGTGTCAACATGTTTTCGGGCTTA
ATTCCTGATGAAATTTCTCTGATCAGCAGTCTTGAAGTTGTTGTACTTTTCAATAATTCA
CTTCAAGGAAAGATTCCATCTTCTATAGGTAGACTTAGAAATCTTCAACAACTTGATCTT
CGAAAGAATCGTTTGAGTTCAACCATTCCTTCTGAGTTAGGTCTTTGTACTAACCTCATT
TTCTTGGCTCTAGCAGAGAATATCCTGCAAGGACCATTGCCTATATCCTTGTCCGCGGTG
ACCAAGTTATCTGACTTGAACTTGTCTGATAATTTTCTTTCTGGTGAGGTTCAATCATAT
CTCATTACCAATTGGACTGAGCTGACATCTTTGCAGCTTCAAAACAATTCATTTTCACGG
AAAATTCCACCTGAAATCAGCCAGTTGAAAAACCTCGTATATCTTTACCTCTATAGTAAC
AATTTCACTGGTTCCATTCCCTATCAGATTGGTAAGTTGCAAAACTTGCTGGATCTAGAT
GTCTCTGAGAACCAGCTTTCAGGCACAATACCTCCAACCATTGGAAACCTGACCAATCTA
AGGACGTTGCAGCTTTTTCGGAACAACATCAGTGGAACCATTCCTTCTGAGATTGGCAAA
TTGACATCTCTTCAAACCCTTGACCTCAACACTAACCGGTTTAGTGGTGAGCTGCCCGAC
AGCATTTCTAACCTCGGCAGTCTGAAGCTTCTTGAGTTCCTTTCTCTTAGTAACAACCAG
TTTTCAGGTGTGATCCCTTTGTCTATTTGCAATTCGACATCACTACAAACTCTAGTTTTC
GCAAGAAACAATTTCAGGGGAGAGATTCCACAATGTTTGGGTAATATCAGTGGCCTCTCC
ATTTTGGATATGCGCTGCAACAATCTTTCTGGGATTCTTCCAACAAGTTTTGATATTGGA
TGTTCACTTAGAACCTTCAACTTTCATGGAAATGAACTACAAGGGAAAATCCCTCGATCT
TTAGCCAATTGTAAAGAGTTGCAAGTTCTTGATTTAGGAGACAATCACCTCAATGATACA
TTCCCCATGTGGTTGGGAACTCTATCAATGTTGCAGGTTTTAAGTTTGAGATCGAATAAA
TTGCATGGACCCATTAGAACTTCAAGGATTGGAAACATGTTTCCTGGTCTTCGAATATTA
GATCTCTCTCGCAATGCCTTCACAGGAAACTTGCCGACAAGTCTATTTCAACATTTGAAC
GCCATGAAGACAACTAATCAAACAAAGAATGCACCAATTGAAGGAAGCCACTATTACCAA
GACTCGGTAGTTGTTGTAATGAAGGGACGCATGTTTGAAGTTGTGAGAATCTTGTATTTA
TACACGAGTATGGATCTTTCAAGTAACAAATTTGAAGGACTTATTCCAAGTATTATGGGA
GATCTCATTGCACTTCGGGTGTTGAATTTGTCTAACAATGGGTTGCAAGGTCATATACCG
CCATCACTTGGAAATTTAGCGGTAGTAGAATCATTTGACCTTTCATTCAACCACCTTTCA
GGAGAGATACCGGAACAACTTGCTTCTATAACAAGTCTTGCAGTTTTAAATCTCTCCTAC
AATCATCTTGAAGGATGCATTCCTCAAGGACCTCAGTTTGCTACATTTCAGAACAGTTCA
TATGAAGGTAATGATGGATTACATGGATTTCCAGTTTCAAAAGGTTGTGGTAATGATCAG
GTATCAGAGACAAATGATACCGTATCTGCACCAGACGAACAAGAAAGCAATTCGGAGTTT
CTGAATGATTTTTGGAAAGCTGCTCTTATGGGCTATGGAAGTGGACTATGTATTGGATTA
TCCATAATATATTTCATGATCTCAACTCAAACTCCAAAATGGCTAGCAAGAATCATGGAA
GAGTTGGAACACAAAATTATTACGCGAAGTAGAAAGAAGCAACGAGGTAAAAGGCATTAT
AGAAGAAGAAAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400024515
PEP Infomation

pacid=37447901 transcript=PGSC0003DMT400036087 locus=PGSC0003DMG400013898 ID=PGSC0003DMT400036087.v4.03 annot-version=v4.03
Sequence

MTTSHSTFLYILLVLLLFSLPFTITSSATTEAEALVKWKMNLSSASFLDSWSISNLGNLC
NWTSIVCNAGGTISDINLSDAGLSGTLDQLDFTSFPSLTSFSLNGNNLSGSIPSNIGNAS
MLTFLDLSNNILEGVIPEEIEKLTQLEYLSFYNNNIIDVIPYQISNLQKVWHLDLGSNFL
ETPDWSKLRNMPMLTYLSFGYNELTLEFPEFVLRCHNLTYLDLSINHLNGSIPETLFTNL
DKLEQLNLSSNSFQGSLSPNFTKLTKLKELQLGVNMFSGLIPDEISLISSLEVVVLFNNS
LQGKIPSSIGRLRNLQQLDLRKNRLSSTIPSELGLCTNLIFLALAENILQGPLPISLSAV
TKLSDLNLSDNFLSGEVQSYLITNWTELTSLQLQNNSFSRKIPPEISQLKNLVYLYLYSN
NFTGSIPYQIGKLQNLLDLDVSENQLSGTIPPTIGNLTNLRTLQLFRNNISGTIPSEIGK
LTSLQTLDLNTNRFSGELPDSISNLGSLKLLEFLSLSNNQFSGVIPLSICNSTSLQTLVF
ARNNFRGEIPQCLGNISGLSILDMRCNNLSGILPTSFDIGCSLRTFNFHGNELQGKIPRS
LANCKELQVLDLGDNHLNDTFPMWLGTLSMLQVLSLRSNKLHGPIRTSRIGNMFPGLRIL
DLSRNAFTGNLPTSLFQHLNAMKTTNQTKNAPIEGSHYYQDSVVVVMKGRMFEVVRILYL
YTSMDLSSNKFEGLIPSIMGDLIALRVLNLSNNGLQGHIPPSLGNLAVVESFDLSFNHLS
GEIPEQLASITSLAVLNLSYNHLEGCIPQGPQFATFQNSSYEGNDGLHGFPVSKGCGNDQ
VSETNDTVSAPDEQESNSEFLNDFWKAALMGYGSGLCIGLSIIYFMISTQTPKWLARIME
ELEHKIITRSRKKQRGKRHYRRRK*

Transcript Sequence

Transcript ID

PGSC0003DMT400036087
Transcript Infomation

pacid=37447901 locus=PGSC0003DMG400013898 ID=PGSC0003DMT400036087.v4.03 annot-version=v4.03
Sequence

ATGACAACTTCTCACAGTACCTTCCTTTACATTCTACTTGTGCTTCTTCTTTTTTCACTT
CCATTCACAATTACATCATCAGCAACAACTGAAGCTGAAGCTCTTGTCAAATGGAAGATG
AACTTATCTTCTGCTTCTTTCTTGGATTCATGGTCCATTTCGAATCTCGGAAACTTGTGC
AATTGGACATCTATTGTCTGCAATGCTGGTGGAACAATTTCCGATATCAATCTTTCTGAT
GCAGGCCTCTCAGGCACTCTTGATCAGCTTGACTTCACTTCATTTCCGAGTCTCACAAGT
TTTTCTCTCAATGGCAACAACTTAAGTGGATCGATACCATCAAATATTGGCAATGCTTCT
ATGCTCACTTTCTTGGACCTGAGCAACAATATCTTGGAGGGTGTCATACCAGAAGAGATT
GAGAAGTTAACACAACTTGAATATCTCAGTTTCTATAACAACAATATCATTGATGTTATT
CCCTACCAAATAAGTAATCTTCAGAAGGTATGGCACTTGGATCTTGGATCAAATTTTTTA
GAAACTCCTGATTGGTCCAAATTGAGGAATATGCCTATGTTGACATATTTGAGCTTTGGT
TATAATGAACTAACATTAGAATTCCCTGAATTTGTACTCCGTTGCCATAATCTGACTTAC
CTCGATTTGTCGATAAACCATTTGAATGGTTCAATACCAGAAACACTATTCACCAACTTG
GATAAGCTTGAACAACTCAATCTTTCATCTAATTCATTTCAAGGTTCATTGTCACCAAAT
TTTACCAAGTTGACCAAGTTAAAAGAACTTCAGCTTGGTGTCAACATGTTTTCGGGCTTA
ATTCCTGATGAAATTTCTCTGATCAGCAGTCTTGAAGTTGTTGTACTTTTCAATAATTCA
CTTCAAGGAAAGATTCCATCTTCTATAGGTAGACTTAGAAATCTTCAACAACTTGATCTT
CGAAAGAATCGTTTGAGTTCAACCATTCCTTCTGAGTTAGGTCTTTGTACTAACCTCATT
TTCTTGGCTCTAGCAGAGAATATCCTGCAAGGACCATTGCCTATATCCTTGTCCGCGGTG
ACCAAGTTATCTGACTTGAACTTGTCTGATAATTTTCTTTCTGGTGAGGTTCAATCATAT
CTCATTACCAATTGGACTGAGCTGACATCTTTGCAGCTTCAAAACAATTCATTTTCACGG
AAAATTCCACCTGAAATCAGCCAGTTGAAAAACCTCGTATATCTTTACCTCTATAGTAAC
AATTTCACTGGTTCCATTCCCTATCAGATTGGTAAGTTGCAAAACTTGCTGGATCTAGAT
GTCTCTGAGAACCAGCTTTCAGGCACAATACCTCCAACCATTGGAAACCTGACCAATCTA
AGGACGTTGCAGCTTTTTCGGAACAACATCAGTGGAACCATTCCTTCTGAGATTGGCAAA
TTGACATCTCTTCAAACCCTTGACCTCAACACTAACCGGTTTAGTGGTGAGCTGCCCGAC
AGCATTTCTAACCTCGGCAGTCTGAAGCTTCTTGAGTTCCTTTCTCTTAGTAACAACCAG
TTTTCAGGTGTGATCCCTTTGTCTATTTGCAATTCGACATCACTACAAACTCTAGTTTTC
GCAAGAAACAATTTCAGGGGAGAGATTCCACAATGTTTGGGTAATATCAGTGGCCTCTCC
ATTTTGGATATGCGCTGCAACAATCTTTCTGGGATTCTTCCAACAAGTTTTGATATTGGA
TGTTCACTTAGAACCTTCAACTTTCATGGAAATGAACTACAAGGGAAAATCCCTCGATCT
TTAGCCAATTGTAAAGAGTTGCAAGTTCTTGATTTAGGAGACAATCACCTCAATGATACA
TTCCCCATGTGGTTGGGAACTCTATCAATGTTGCAGGTTTTAAGTTTGAGATCGAATAAA
TTGCATGGACCCATTAGAACTTCAAGGATTGGAAACATGTTTCCTGGTCTTCGAATATTA
GATCTCTCTCGCAATGCCTTCACAGGAAACTTGCCGACAAGTCTATTTCAACATTTGAAC
GCCATGAAGACAACTAATCAAACAAAGAATGCACCAATTGAAGGAAGCCACTATTACCAA
GACTCGGTAGTTGTTGTAATGAAGGGACGCATGTTTGAAGTTGTGAGAATCTTGTATTTA
TACACGAGTATGGATCTTTCAAGTAACAAATTTGAAGGACTTATTCCAAGTATTATGGGA
GATCTCATTGCACTTCGGGTGTTGAATTTGTCTAACAATGGGTTGCAAGGTCATATACCG
CCATCACTTGGAAATTTAGCGGTAGTAGAATCATTTGACCTTTCATTCAACCACCTTTCA
GGAGAGATACCGGAACAACTTGCTTCTATAACAAGTCTTGCAGTTTTAAATCTCTCCTAC
AATCATCTTGAAGGATGCATTCCTCAAGGACCTCAGTTTGCTACATTTCAGAACAGTTCA
TATGAAGGTAATGATGGATTACATGGATTTCCAGTTTCAAAAGGTTGTGGTAATGATCAG
GTATCAGAGACAAATGATACCGTATCTGCACCAGACGAACAAGAAAGCAATTCGGAGTTT
CTGAATGATTTTTGGAAAGCTGCTCTTATGGGCTATGGAAGTGGACTATGTATTGGATTA
TCCATAATATATTTCATGATCTCAACTCAAACTCCAAAATGGCTAGCAAGAATCATGGAA
GAGTTGGAACACAAAATTATTACGCGAAGTAGAAAGAAGCAACGAGGTAAAAGGCATTAT
AGAAGAAGAAAATAA