Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036085
CDS Infomation

pacid=37445786 polypeptide=PGSC0003DMP400024513 locus=PGSC0003DMG400013896 ID=PGSC0003DMT400036085.v4.03 annot-version=v4.03
Sequence

ATGAGCAGAAGACGCCACCAAATCATCTGTTCCTCCGACGAAGAAGAGGACGGCGACGAC
GAACCTCAGCAACTCGCCGGCGGCAATGAAGAAAATGAAAATCCTAACAACATAGAAATG
GAAATTCTAGAATCGTCTACTAACTTCGAATCAGTAACCCTAAATTCTCCCATCCAAAAC
CCTACACCTAATCATGAGCCAAACATCGACGTTTCTGAAGTTATACGAGCTGCGGATTGT
GGTATTGGTCGGGTATTGGAAGGATTAGGGTTAAGATTGCGGAGGGAATGGTTAGAATCA
TGTGTTGGAGGACTTGAAGGATCAGTAGTAGGAGGGTTTTCTGGATTGGATGATACGACG
AAGGCAAAACTTTGTTTCGAGCAGTTTTTGTACTCGGATATGAATTTTTGTGGTGCAGGA
TTGCTTCCAAGGGACGTGCACAAGCTGCATTTGGTTGATCTTAAAGGACCCTTTGTTCTT
CAGGTAGATGAAATTGTGAATATCAGTTGTCCTCTTCAAGATAGGTATCAGAAAGCAGCT
GCTGGAATAAAGAGGTGTCTGAAATTGTCCATGACTGATGGCATTCAGCAAGTGTTTGGG
ATGGAGTACAGGCCTATAAAAGATCTCGATGTTCTGGCTCCTTCTGGACTGAAGGTTGCT
ATCTGTAATGTTCATGTTAGGCATGGAATTCTGATGTTGGTCCCTGAAGTTATTGAAGTT
CTGGGTGGGATGGTGGAAGAGTTAGAAGAAGCAAGGAAGCGGCTAGTTAATGAAATAAAT
AAGCCACCAAGGGGGAAAAGAACAAGGTCTGGAGTGGTTCCTCCTTTGGCAACTAGAGCT
ACTGGTGCTGCATGGCCACGAGAAGGTGTTACTGTTCCAGAGCACTCTGATACTTCCTCA
AGACAAAGTATGCATTTTCAGGTTCATGAACGAGGAACATCTGGTATTGCTACTTCTGCA
ACTGAAGAAATTCATCCCATTACATCTGGGCTACCATCTTCTACGACATTCACCACTCCT
GTTTATAGAAGAGAGGCTCAATCTAATTTTCCATCTACTCCAGCTGTTTCTGTCCCATTC
AATAGGAAGGTTACTGGGCCTACCTTTTCGTCTGATGCAGCTAGTCATGCAGAGGATATC
CATATGGCTGACATGACCACCGAAGGCATTGATGTTCCAATTAGAAGGGAACATAATGAC
CCTGTTCTGTCATCTTCTTACTCCATGGAAGTGGAGGAACTTCTGTCAGATGTTAGAAGT
GACCCTGCCACACCTGCCAGTAGCAGGAGCAGAGGAAGCGTCCGTGTCTCTGGCGGTAGT
GTCCATAATGAAGATGTAACACCAGATACAATGTCTACTGCAGCAATTGACATTGATGAA
ATTGATTTGGTTGATGAATTGGACCATCCATATATACTTTCTGGAGGGAAGGAAAACCCT
TTCACTTACTTAGCTAGTCTGTCAGCTAAGCAGGCTGGTATGAATGGCAGTGCTTCCACT
GTTACAGGAAAAATTAAGTGCTTTCTTACTGGTGTGAAGGGCTTTCAGTATAAACAGAGT
AGTAAATACGAGCTTCGAGTTTATGTTGATGATGGCAGCCTAATCTCTGAGATCCTTATA
GATCATGCTCTTGTGCAGAAAAAAATAGGCTTTTCTCCTGCAGAGGTAAATGCTGCTCTT
AGTTCTTCAGATAGCAAACGAGTCAGTGACACGAAGGAGACACTGAAATGTTTCCAGAAA
TTCTTGATTAATTTTGAGGGAACAATGCTTGTTCATTTGAATGAAGAATCTCCAATTCCA
GTTGCTACTGAAATGAACCAGGGGTGTTCTGCCTCTGATGCATGGTTGCTTCTCAAAAGA
CTAAAGCCTTCTACTTCTCCGCGACAACATCATCTTCATCACCCAGAAACCATCAATTTA
TCCCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024513
PEP Infomation

pacid=37445786 transcript=PGSC0003DMT400036085 locus=PGSC0003DMG400013896 ID=PGSC0003DMT400036085.v4.03 annot-version=v4.03
Sequence

MSRRRHQIICSSDEEEDGDDEPQQLAGGNEENENPNNIEMEILESSTNFESVTLNSPIQN
PTPNHEPNIDVSEVIRAADCGIGRVLEGLGLRLRREWLESCVGGLEGSVVGGFSGLDDTT
KAKLCFEQFLYSDMNFCGAGLLPRDVHKLHLVDLKGPFVLQVDEIVNISCPLQDRYQKAA
AGIKRCLKLSMTDGIQQVFGMEYRPIKDLDVLAPSGLKVAICNVHVRHGILMLVPEVIEV
LGGMVEELEEARKRLVNEINKPPRGKRTRSGVVPPLATRATGAAWPREGVTVPEHSDTSS
RQSMHFQVHERGTSGIATSATEEIHPITSGLPSSTTFTTPVYRREAQSNFPSTPAVSVPF
NRKVTGPTFSSDAASHAEDIHMADMTTEGIDVPIRREHNDPVLSSSYSMEVEELLSDVRS
DPATPASSRSRGSVRVSGGSVHNEDVTPDTMSTAAIDIDEIDLVDELDHPYILSGGKENP
FTYLASLSAKQAGMNGSASTVTGKIKCFLTGVKGFQYKQSSKYELRVYVDDGSLISEILI
DHALVQKKIGFSPAEVNAALSSSDSKRVSDTKETLKCFQKFLINFEGTMLVHLNEESPIP
VATEMNQGCSASDAWLLLKRLKPSTSPRQHHLHHPETINLSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400036085
Transcript Infomation

pacid=37445786 locus=PGSC0003DMG400013896 ID=PGSC0003DMT400036085.v4.03 annot-version=v4.03
Sequence

ATGAGCAGAAGACGCCACCAAATCATCTGTTCCTCCGACGAAGAAGAGGACGGCGACGAC
GAACCTCAGCAACTCGCCGGCGGCAATGAAGAAAATGAAAATCCTAACAACATAGAAATG
GAAATTCTAGAATCGTCTACTAACTTCGAATCAGTAACCCTAAATTCTCCCATCCAAAAC
CCTACACCTAATCATGAGCCAAACATCGACGTTTCTGAAGTTATACGAGCTGCGGATTGT
GGTATTGGTCGGGTATTGGAAGGATTAGGGTTAAGATTGCGGAGGGAATGGTTAGAATCA
TGTGTTGGAGGACTTGAAGGATCAGTAGTAGGAGGGTTTTCTGGATTGGATGATACGACG
AAGGCAAAACTTTGTTTCGAGCAGTTTTTGTACTCGGATATGAATTTTTGTGGTGCAGGA
TTGCTTCCAAGGGACGTGCACAAGCTGCATTTGGTTGATCTTAAAGGACCCTTTGTTCTT
CAGGTAGATGAAATTGTGAATATCAGTTGTCCTCTTCAAGATAGGTATCAGAAAGCAGCT
GCTGGAATAAAGAGGTGTCTGAAATTGTCCATGACTGATGGCATTCAGCAAGTGTTTGGG
ATGGAGTACAGGCCTATAAAAGATCTCGATGTTCTGGCTCCTTCTGGACTGAAGGTTGCT
ATCTGTAATGTTCATGTTAGGCATGGAATTCTGATGTTGGTCCCTGAAGTTATTGAAGTT
CTGGGTGGGATGGTGGAAGAGTTAGAAGAAGCAAGGAAGCGGCTAGTTAATGAAATAAAT
AAGCCACCAAGGGGGAAAAGAACAAGGTCTGGAGTGGTTCCTCCTTTGGCAACTAGAGCT
ACTGGTGCTGCATGGCCACGAGAAGGTGTTACTGTTCCAGAGCACTCTGATACTTCCTCA
AGACAAAGTATGCATTTTCAGGTTCATGAACGAGGAACATCTGGTATTGCTACTTCTGCA
ACTGAAGAAATTCATCCCATTACATCTGGGCTACCATCTTCTACGACATTCACCACTCCT
GTTTATAGAAGAGAGGCTCAATCTAATTTTCCATCTACTCCAGCTGTTTCTGTCCCATTC
AATAGGAAGGTTACTGGGCCTACCTTTTCGTCTGATGCAGCTAGTCATGCAGAGGATATC
CATATGGCTGACATGACCACCGAAGGCATTGATGTTCCAATTAGAAGGGAACATAATGAC
CCTGTTCTGTCATCTTCTTACTCCATGGAAGTGGAGGAACTTCTGTCAGATGTTAGAAGT
GACCCTGCCACACCTGCCAGTAGCAGGAGCAGAGGAAGCGTCCGTGTCTCTGGCGGTAGT
GTCCATAATGAAGATGTAACACCAGATACAATGTCTACTGCAGCAATTGACATTGATGAA
ATTGATTTGGTTGATGAATTGGACCATCCATATATACTTTCTGGAGGGAAGGAAAACCCT
TTCACTTACTTAGCTAGTCTGTCAGCTAAGCAGGCTGGTATGAATGGCAGTGCTTCCACT
GTTACAGGAAAAATTAAGTGCTTTCTTACTGGTGTGAAGGGCTTTCAGTATAAACAGAGT
AGTAAATACGAGCTTCGAGTTTATGTTGATGATGGCAGCCTAATCTCTGAGATCCTTATA
GATCATGCTCTTGTGCAGAAAAAAATAGGCTTTTCTCCTGCAGAGGTAAATGCTGCTCTT
AGTTCTTCAGATAGCAAACGAGTCAGTGACACGAAGGAGACACTGAAATGTTTCCAGAAA
TTCTTGATTAATTTTGAGGGAACAATGCTTGTTCATTTGAATGAAGAATCTCCAATTCCA
GTTGCTACTGAAATGAACCAGGGGTGTTCTGCCTCTGATGCATGGTTGCTTCTCAAAAGA
CTAAAGCCTTCTACTTCTCCGCGACAACATCATCTTCATCACCCAGAAACCATCAATTTA
TCCCCTTGA