Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400036067
CDS Infomation

pacid=37446919 polypeptide=PGSC0003DMP400024499 locus=PGSC0003DMG400013890 ID=PGSC0003DMT400036067.v4.03 annot-version=v4.03
Sequence

ATGCAGCAACAGGAGACATGTCAATTATCTGTTATATGGAGAGGAAAGAAGTTTAGTCTG
GAGATGGATCCAGCTGCTACTCTCAAATCACTGGGGGATGAATTGCTGAATCTCACCAAT
GTTAGAGATGATACAATGCGCCTCATTGTGCCTACTAATAAAAGTTCAATACTTTTGTAT
CCTTTCTCTGAAGAGCATTCCTACCTAAAATTGGAGGCAGCATCCATTCTTGAGGGGAAA
TCTATTAGGATGTTGGGAGTGCCCAAAGATGAAGTAGATGACATACTACAGAGTGCAAAG
GCAGACCTCAGGATTGTGGGTTTTGATGAAGAGGAAAAGAGATCGAGACAAAGAAACTCA
AATGGGCTTCAAAGTTCACTAAAACTTCCACAAGGGCCTTATGTCTTTTGTGATTTTCGG
ACACTCCACCTTCCTGGTATAGAGTTGAATCCTCCTGCTTCAAAAGCTTTAAAACTAATG
CATAAGCTTGCTGCTGATCCAGGAATTGTTGCAATCATGAATAAGCATCACTGGCGTGTG
GGTATCATGACAGAGATGGCACCAGAAGGCTATGTTGGTGTTAGTCCTGAATGCATTCTT
GGCTTCAATAAGAATCACGGTGAGGAGATATCACTGCGTCTTCGTACAGACGACCTCAAG
GGTTTCAGGAAGTATGATAGCATCAAGAAGACACTCTTGCATGAACTTTCACACATGGTA
CATTCTGAACATGATGTGAACTTCTATGCTCTTCTTAAGCAGCTTAATGAAGAAGCTGCT
AAGTTGGACTGGACTAAATCAAGAGGTCATACCGTGAGTGGTCACAATTTGCAGCACTAT
GAAGACGATGAGGACAACGATAATCTAATTGGGTTATCACATAAGCTTGGGGGACAAACT
TCAGTTTTCAATGCTCGAGCATCTTCAGTGGTTGCTGCCTACAGCCGTTTAGCACAGGCA
TCCACCAACCCCTCAGAAGCAATTGATATGCATCAGGCATCTAATGCTGGTGATTCACTG
CAATCCAATCATGTAGATGCTCTAGTGGAAAAGCAACTGAATGATGTGAAAGTAGTTAGT
GTTGATGTCCCCCCATTTGATGATCAAAGAGAATCTGAACCTGATCCTGATGATTGCGGG
ACTGGCTCTCCCATGAAACATGAGCCTCATATGGAACTTGATTCTGATGATCATAAGATG
AGAAGCCTTCCGCCTCCTTTGGAAGCTAAATTAAGTAAAGAACCTGACCCGGATGATTGC
TCTGCAGAACAACACAATACAACAACTCCTACTTCTTTGGAACCTGATCCTGATGAGCGC
ATTATGCGGATCGAAAAGAAAGTAACAGATGGTCAAAATAGCGATGTTTCATTGGGGCAC
CATGTAAATGAGGAAGAGAGCGGATCTTTTACACACACCAACCAAGATGATTTTCCTGAA
GGAATTAAGCTGGTAGAGCCATGTACTAATGATAAGGATATAATACCAGATGGAGTCTCT
AGTATAGTGATTGATGAGCCTGATCCAGATGACCAGGAATTGCAGAGGATACGAGATCCT
GTTGCCATCATTTGCAGTCGACTGCAGAAAGCAATAGGTGTGTTGAGATCTCAAGCTACT
CCCTTGGAGGTCTCTAGGGTAGTGCAAACTATATTGAAAATTATAAGGAATGCAATTGAA
CACCCAGATGAAGCAAAATTCAGAAAGTTGCGGAAGGCTAATCCTCTAATTCAGAGGGAT
GTGGTGAATTATTCAGCTGCAATGGAGATTCTGTCTGTGATTGGATTCAGTGAAGACGCT
ATTATCGACAACACTGGTAGGACGGAAGCTTATTTGGTCCTCAAAAGGAATGATCCAGGA
TTATTGTGGCTTGCCAAGTCTTTCCTTGAAACCTCCATTGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400024499
PEP Infomation

pacid=37446919 transcript=PGSC0003DMT400036067 locus=PGSC0003DMG400013890 ID=PGSC0003DMT400036067.v4.03 annot-version=v4.03
Sequence

MQQQETCQLSVIWRGKKFSLEMDPAATLKSLGDELLNLTNVRDDTMRLIVPTNKSSILLY
PFSEEHSYLKLEAASILEGKSIRMLGVPKDEVDDILQSAKADLRIVGFDEEEKRSRQRNS
NGLQSSLKLPQGPYVFCDFRTLHLPGIELNPPASKALKLMHKLAADPGIVAIMNKHHWRV
GIMTEMAPEGYVGVSPECILGFNKNHGEEISLRLRTDDLKGFRKYDSIKKTLLHELSHMV
HSEHDVNFYALLKQLNEEAAKLDWTKSRGHTVSGHNLQHYEDDEDNDNLIGLSHKLGGQT
SVFNARASSVVAAYSRLAQASTNPSEAIDMHQASNAGDSLQSNHVDALVEKQLNDVKVVS
VDVPPFDDQRESEPDPDDCGTGSPMKHEPHMELDSDDHKMRSLPPPLEAKLSKEPDPDDC
SAEQHNTTTPTSLEPDPDERIMRIEKKVTDGQNSDVSLGHHVNEEESGSFTHTNQDDFPE
GIKLVEPCTNDKDIIPDGVSSIVIDEPDPDDQELQRIRDPVAIICSRLQKAIGVLRSQAT
PLEVSRVVQTILKIIRNAIEHPDEAKFRKLRKANPLIQRDVVNYSAAMEILSVIGFSEDA
IIDNTGRTEAYLVLKRNDPGLLWLAKSFLETSIV*

Transcript Sequence

Transcript ID

PGSC0003DMT400036067
Transcript Infomation

pacid=37446919 locus=PGSC0003DMG400013890 ID=PGSC0003DMT400036067.v4.03 annot-version=v4.03
Sequence

ATGCAGCAACAGGAGACATGTCAATTATCTGTTATATGGAGAGGAAAGAAGTTTAGTCTG
GAGATGGATCCAGCTGCTACTCTCAAATCACTGGGGGATGAATTGCTGAATCTCACCAAT
GTTAGAGATGATACAATGCGCCTCATTGTGCCTACTAATAAAAGTTCAATACTTTTGTAT
CCTTTCTCTGAAGAGCATTCCTACCTAAAATTGGAGGCAGCATCCATTCTTGAGGGGAAA
TCTATTAGGATGTTGGGAGTGCCCAAAGATGAAGTAGATGACATACTACAGAGTGCAAAG
GCAGACCTCAGGATTGTGGGTTTTGATGAAGAGGAAAAGAGATCGAGACAAAGAAACTCA
AATGGGCTTCAAAGTTCACTAAAACTTCCACAAGGGCCTTATGTCTTTTGTGATTTTCGG
ACACTCCACCTTCCTGGTATAGAGTTGAATCCTCCTGCTTCAAAAGCTTTAAAACTAATG
CATAAGCTTGCTGCTGATCCAGGAATTGTTGCAATCATGAATAAGCATCACTGGCGTGTG
GGTATCATGACAGAGATGGCACCAGAAGGCTATGTTGGTGTTAGTCCTGAATGCATTCTT
GGCTTCAATAAGAATCACGGTGAGGAGATATCACTGCGTCTTCGTACAGACGACCTCAAG
GGTTTCAGGAAGTATGATAGCATCAAGAAGACACTCTTGCATGAACTTTCACACATGGTA
CATTCTGAACATGATGTGAACTTCTATGCTCTTCTTAAGCAGCTTAATGAAGAAGCTGCT
AAGTTGGACTGGACTAAATCAAGAGGTCATACCGTGAGTGGTCACAATTTGCAGCACTAT
GAAGACGATGAGGACAACGATAATCTAATTGGGTTATCACATAAGCTTGGGGGACAAACT
TCAGTTTTCAATGCTCGAGCATCTTCAGTGGTTGCTGCCTACAGCCGTTTAGCACAGGCA
TCCACCAACCCCTCAGAAGCAATTGATATGCATCAGGCATCTAATGCTGGTGATTCACTG
CAATCCAATCATGTAGATGCTCTAGTGGAAAAGCAACTGAATGATGTGAAAGTAGTTAGT
GTTGATGTCCCCCCATTTGATGATCAAAGAGAATCTGAACCTGATCCTGATGATTGCGGG
ACTGGCTCTCCCATGAAACATGAGCCTCATATGGAACTTGATTCTGATGATCATAAGATG
AGAAGCCTTCCGCCTCCTTTGGAAGCTAAATTAAGTAAAGAACCTGACCCGGATGATTGC
TCTGCAGAACAACACAATACAACAACTCCTACTTCTTTGGAACCTGATCCTGATGAGCGC
ATTATGCGGATCGAAAAGAAAGTAACAGATGGTCAAAATAGCGATGTTTCATTGGGGCAC
CATGTAAATGAGGAAGAGAGCGGATCTTTTACACACACCAACCAAGATGATTTTCCTGAA
GGAATTAAGCTGGTAGAGCCATGTACTAATGATAAGGATATAATACCAGATGGAGTCTCT
AGTATAGTGATTGATGAGCCTGATCCAGATGACCAGGAATTGCAGAGGATACGAGATCCT
GTTGCCATCATTTGCAGTCGACTGCAGAAAGCAATAGGTGTGTTGAGATCTCAAGCTACT
CCCTTGGAGGTCTCTAGGGTAGTGCAAACTATATTGAAAATTATAAGGAATGCAATTGAA
CACCCAGATGAAGCAAAATTCAGAAAGTTGCGGAAGGCTAATCCTCTAATTCAGAGGGAT
GTGGTGAATTATTCAGCTGCAATGGAGATTCTGTCTGTGATTGGATTCAGTGAAGACGCT
ATTATCGACAACACTGGTAGGACGGAAGCTTATTTGGTCCTCAAAAGGAATGATCCAGGA
TTATTGTGGCTTGCCAAGTCTTTCCTTGAAACCTCCATTGTCTAG