Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035991
CDS Infomation

pacid=37462855 polypeptide=PGSC0003DMP400024454 locus=PGSC0003DMG400013857 ID=PGSC0003DMT400035991.v4.03 annot-version=v4.03
Sequence

ATGGACCTGAAATCAAATACATCCCCTGTTGTCACCGATCCTGCCCCACTGACTCCGTCC
AGATTGGGCATCCACTCAGCTTTGATGCCATACCCTCCGGCTGGGCCAACTTTCTCTCCC
ACGCTCTTCCTTACTATCCCAAGGAAGAAGCCTGGAATTCTAGATGATGTTAGATCAAAC
ACTTGGTTGGTGGATGCCATGAAATCTTCATCTCCTACACATAGAAAGAAAAGTAAGGAT
TCCACTGCTGAATTAGCATCAAATGAAAATGATCTTGCCTACCGCATATGGATGCTCAAG
TATCCGTCGGCACTTTCATCATTTGAGCAAATCACAAATTATGCAAAAGGCAAAAGAATA
GCACTTTTTCTGGACTATGATGGGACTTTATCACCAATTGTAGATGATCCAGATCGAGCT
TTCATGTCTAGTGCTATGCGTGCTGCTGTGAGGAATGTGGCTAAATATTTTCCCACAGCA
ATTATTAGTGGGAGAAGTCGTGATAAGGTATATGACTTTGTCGGACTATCTGAACTTTAC
TACGCTGGTAGTCACGGCATGGATATAATGAGCCCTGTTCGAGCCATTTCTAATGACTAT
AGTTGTATTAGATCTACTGACAAGCAGGGCAAGGAAGTTAATCTTTTCCAACCTGCTAGT
GAGTTCTTACCAATGATCGAGGAGGTTCTTAGATCTCTTGTTGAGCTCACAAAAGACATC
AGCGGAGCAAAGGTTGAGAACAACAAATTCTGTGTTTCAGTACACTATCGTAATGTAGAT
GAGAAGAGTTGGTCAACCATCGGAGAATCTGTTGATGAATTGTTAAAACACTACCCCCGT
CTGCGATTGACACATGGCCGGAAGGTTTTAGAAGTCAGGCCTGTGCTTAACTGGGACAAA
GGGAAAGCTGTTGAGTTCTTACTTGAATCATTGGGGTTGAATAATTGTGATGATGTTCTT
CCCATTTACATAGGAGATGATCGTACAGATGAAGATGCATTTAAGGTAAAGTTTAACAGA
CCCGCTTTTCCTCGTGGGATCATCAACCATGTTTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024454
PEP Infomation

pacid=37462855 transcript=PGSC0003DMT400035991 locus=PGSC0003DMG400013857 ID=PGSC0003DMT400035991.v4.03 annot-version=v4.03
Sequence

MDLKSNTSPVVTDPAPLTPSRLGIHSALMPYPPAGPTFSPTLFLTIPRKKPGILDDVRSN
TWLVDAMKSSSPTHRKKSKDSTAELASNENDLAYRIWMLKYPSALSSFEQITNYAKGKRI
ALFLDYDGTLSPIVDDPDRAFMSSAMRAAVRNVAKYFPTAIISGRSRDKVYDFVGLSELY
YAGSHGMDIMSPVRAISNDYSCIRSTDKQGKEVNLFQPASEFLPMIEEVLRSLVELTKDI
SGAKVENNKFCVSVHYRNVDEKSWSTIGESVDELLKHYPRLRLTHGRKVLEVRPVLNWDK
GKAVEFLLESLGLNNCDDVLPIYIGDDRTDEDAFKVKFNRPAFPRGIINHVY*

Transcript Sequence

Transcript ID

PGSC0003DMT400035991
Transcript Infomation

pacid=37462855 locus=PGSC0003DMG400013857 ID=PGSC0003DMT400035991.v4.03 annot-version=v4.03
Sequence

ATGGACCTGAAATCAAATACATCCCCTGTTGTCACCGATCCTGCCCCACTGACTCCGTCC
AGATTGGGCATCCACTCAGCTTTGATGCCATACCCTCCGGCTGGGCCAACTTTCTCTCCC
ACGCTCTTCCTTACTATCCCAAGGAAGAAGCCTGGAATTCTAGATGATGTTAGATCAAAC
ACTTGGTTGGTGGATGCCATGAAATCTTCATCTCCTACACATAGAAAGAAAAGTAAGGAT
TCCACTGCTGAATTAGCATCAAATGAAAATGATCTTGCCTACCGCATATGGATGCTCAAG
TATCCGTCGGCACTTTCATCATTTGAGCAAATCACAAATTATGCAAAAGGCAAAAGAATA
GCACTTTTTCTGGACTATGATGGGACTTTATCACCAATTGTAGATGATCCAGATCGAGCT
TTCATGTCTAGTGCTATGCGTGCTGCTGTGAGGAATGTGGCTAAATATTTTCCCACAGCA
ATTATTAGTGGGAGAAGTCGTGATAAGGTATATGACTTTGTCGGACTATCTGAACTTTAC
TACGCTGGTAGTCACGGCATGGATATAATGAGCCCTGTTCGAGCCATTTCTAATGACTAT
AGTTGTATTAGATCTACTGACAAGCAGGGCAAGGAAGTTAATCTTTTCCAACCTGCTAGT
GAGTTCTTACCAATGATCGAGGAGGTTCTTAGATCTCTTGTTGAGCTCACAAAAGACATC
AGCGGAGCAAAGGTTGAGAACAACAAATTCTGTGTTTCAGTACACTATCGTAATGTAGAT
GAGAAGAGTTGGTCAACCATCGGAGAATCTGTTGATGAATTGTTAAAACACTACCCCCGT
CTGCGATTGACACATGGCCGGAAGGTTTTAGAAGTCAGGCCTGTGCTTAACTGGGACAAA
GGGAAAGCTGTTGAGTTCTTACTTGAATCATTGGGGTTGAATAATTGTGATGATGTTCTT
CCCATTTACATAGGAGATGATCGTACAGATGAAGATGCATTTAAGGTAAAGTTTAACAGA
CCCGCTTTTCCTCGTGGGATCATCAACCATGTTTACTAA