Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035987
CDS Infomation

pacid=37459974 polypeptide=PGSC0003DMP400024451 locus=PGSC0003DMG400013856 ID=PGSC0003DMT400035987.v4.03 annot-version=v4.03
Sequence

ATGGCCACCCAGTACCATTCCAGTTATGACCTGGAAAACTCCGCCTCCCATTACACATTC
CTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATTTTC
CTCTCCTCTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAATCACCG
GACTTGCAGAGTAACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTC
TCCGATAAGACTTTTCGAGATGTCGTCAATGCTAGTCACGTTTCTTATGCGTGGTCCAAT
GCTATGCTTAGCTGGCAAAGAACTGCTTACCATTTTCAACCTCAAAAAAATTGGATGAAC
GATCCTAATGGTCCATTGTACCACAAGGGATGGTATCATCTTTTTTATCAATACAATCCA
GATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCCGTATCCAAGGACTTGATCCAC
TGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTACGATATAAACGGTGTCTGG
ACTGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACT
GATGATTATGTACAAGTGCAAAATCTTGCGTACCCCACCAACTTATCTGATCCTCTCCTT
CTAGACTGGGTCAAGTACAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTC
AAGGACTTTAGAGACCCGACCACTGCTTGGACCGGACCCCAAAATGGGCAATGGCTTTTA
ACAATCGGGTCTAAGATTGGTAAAACGGGTATTGCACTTGTTTATGAAACTTCCAACTTC
ACAAGCTTTAAGCTATTGGATGAAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAG
TGTGTGGACTTTTACCCGGTATCGACTGAAAAAACAAACGGGTTGGACACATCATATAAC
GGCCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCACTAT
GCTATTGGGACGTATGACTTGACAAAGAATAAATGGACACCCGATAACCCGGAATTGGAT
TGTGGAATTGGGTTGAAGCTGGATTATGGGAAATATTATGCATCAAAGACATTTTATGAC
CCGAAGAAACAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGATAGTGAATCTGCT
GACCTGCAGAAGGGATGGGCATCTGTACAGAGTATTCCAAGGACAGTGCTTTACGACAAG
AAGACAGGGACACATCTACTTCAGTGGCCAGTTGAAGAAATTGAAAGCTTAAGAGCGGGT
GATCCTATTGTTAAGCAAGTCAATCTTCAACCAGGTTCAATTGAGCTACTCCATGTTGAC
TCAGCTGCAGAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTCCAGGGA
ATAATTGAAGCAGATCATGTAGGTTTCAGCTGCTCTACTAGTGGAGGTGCTGCTAGCAGA
GGCATTTTGGGACCATTTGGTGTCGTTGTAATTGCTGATCAAACGCTATCTGAGCTAACG
CCAGTTTACTTCTACATTTCTAAAGGAGCTGATGGCCGAGCTGAGACTCACTTCTGTGCT
GATCAAACCAGATCCTCAGAGGCTCCGGGAGTTGCTAAACAAGTTTATGGTAGTTCAGTA
CCCGTGTTGGACGGTGAAAAACATTCGATGAGATTATTGGTGGACCACTCAATTGTGGAG
AGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTG
AATGGAGCAGCACGACTCTTCGTTTTCAACAATGCCACAGGGTCTAGCGTGACTGCCTCC
GTCAAGATTTGGTCACTTGAGTCGGCTAATATTCAATCCTTCCCCTTGCAAGACTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024451
PEP Infomation

pacid=37459974 transcript=PGSC0003DMT400035987 locus=PGSC0003DMG400013856 ID=PGSC0003DMT400035987.v4.03 annot-version=v4.03
Sequence

MATQYHSSYDLENSASHYTFLPDQPDSGHRKSLKIISGIFLSSFLLLSVAFFPILNNQSP
DLQSNSRSPAPPSRGVSQGVSDKTFRDVVNASHVSYAWSNAMLSWQRTAYHFQPQKNWMN
DPNGPLYHKGWYHLFYQYNPDSAIWGNITWGHAVSKDLIHWLYLPFAMVPDQWYDINGVW
TGSATILPDGQIMMLYTGDTDDYVQVQNLAYPTNLSDPLLLDWVKYKGNPVLVPPPGIGV
KDFRDPTTAWTGPQNGQWLLTIGSKIGKTGIALVYETSNFTSFKLLDEVLHAVPGTGMWE
CVDFYPVSTEKTNGLDTSYNGPGVKHVLKASLDDNKQDHYAIGTYDLTKNKWTPDNPELD
CGIGLKLDYGKYYASKTFYDPKKQRRVLWGWIGETDSESADLQKGWASVQSIPRTVLYDK
KTGTHLLQWPVEEIESLRAGDPIVKQVNLQPGSIELLHVDSAAELDIEASFEVDKVALQG
IIEADHVGFSCSTSGGAASRGILGPFGVVVIADQTLSELTPVYFYISKGADGRAETHFCA
DQTRSSEAPGVAKQVYGSSVPVLDGEKHSMRLLVDHSIVESFAQGGRTVITSRIYPTKAV
NGAARLFVFNNATGSSVTASVKIWSLESANIQSFPLQDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400035987
Transcript Infomation

pacid=37459974 locus=PGSC0003DMG400013856 ID=PGSC0003DMT400035987.v4.03 annot-version=v4.03
Sequence

ATGGCCACCCAGTACCATTCCAGTTATGACCTGGAAAACTCCGCCTCCCATTACACATTC
CTCCCGGATCAACCCGATTCCGGCCACCGGAAGTCCCTTAAAATCATCTCCGGCATTTTC
CTCTCCTCTTTCCTTTTGCTTTCTGTAGCCTTCTTTCCGATCCTCAACAACCAATCACCG
GACTTGCAGAGTAACTCCCGTTCGCCGGCGCCGCCGTCAAGAGGTGTTTCTCAGGGAGTC
TCCGATAAGACTTTTCGAGATGTCGTCAATGCTAGTCACGTTTCTTATGCGTGGTCCAAT
GCTATGCTTAGCTGGCAAAGAACTGCTTACCATTTTCAACCTCAAAAAAATTGGATGAAC
GATCCTAATGGTCCATTGTACCACAAGGGATGGTATCATCTTTTTTATCAATACAATCCA
GATTCAGCTATTTGGGGAAATATCACATGGGGCCATGCCGTATCCAAGGACTTGATCCAC
TGGCTCTACTTGCCTTTTGCCATGGTTCCTGATCAATGGTACGATATAAACGGTGTCTGG
ACTGGGTCCGCTACCATCCTACCCGATGGTCAGATCATGATGCTTTATACCGGTGACACT
GATGATTATGTACAAGTGCAAAATCTTGCGTACCCCACCAACTTATCTGATCCTCTCCTT
CTAGACTGGGTCAAGTACAAAGGCAACCCGGTTCTGGTTCCTCCACCCGGCATTGGTGTC
AAGGACTTTAGAGACCCGACCACTGCTTGGACCGGACCCCAAAATGGGCAATGGCTTTTA
ACAATCGGGTCTAAGATTGGTAAAACGGGTATTGCACTTGTTTATGAAACTTCCAACTTC
ACAAGCTTTAAGCTATTGGATGAAGTGCTGCATGCGGTTCCGGGTACGGGTATGTGGGAG
TGTGTGGACTTTTACCCGGTATCGACTGAAAAAACAAACGGGTTGGACACATCATATAAC
GGCCCGGGTGTAAAGCATGTGTTAAAAGCAAGTTTAGATGACAATAAGCAAGATCACTAT
GCTATTGGGACGTATGACTTGACAAAGAATAAATGGACACCCGATAACCCGGAATTGGAT
TGTGGAATTGGGTTGAAGCTGGATTATGGGAAATATTATGCATCAAAGACATTTTATGAC
CCGAAGAAACAACGAAGAGTACTGTGGGGATGGATTGGGGAAACTGATAGTGAATCTGCT
GACCTGCAGAAGGGATGGGCATCTGTACAGAGTATTCCAAGGACAGTGCTTTACGACAAG
AAGACAGGGACACATCTACTTCAGTGGCCAGTTGAAGAAATTGAAAGCTTAAGAGCGGGT
GATCCTATTGTTAAGCAAGTCAATCTTCAACCAGGTTCAATTGAGCTACTCCATGTTGAC
TCAGCTGCAGAGTTGGATATAGAAGCCTCATTTGAAGTGGACAAAGTCGCGCTCCAGGGA
ATAATTGAAGCAGATCATGTAGGTTTCAGCTGCTCTACTAGTGGAGGTGCTGCTAGCAGA
GGCATTTTGGGACCATTTGGTGTCGTTGTAATTGCTGATCAAACGCTATCTGAGCTAACG
CCAGTTTACTTCTACATTTCTAAAGGAGCTGATGGCCGAGCTGAGACTCACTTCTGTGCT
GATCAAACCAGATCCTCAGAGGCTCCGGGAGTTGCTAAACAAGTTTATGGTAGTTCAGTA
CCCGTGTTGGACGGTGAAAAACATTCGATGAGATTATTGGTGGACCACTCAATTGTGGAG
AGCTTTGCTCAAGGAGGAAGAACAGTCATAACATCGCGAATTTACCCAACAAAGGCAGTG
AATGGAGCAGCACGACTCTTCGTTTTCAACAATGCCACAGGGTCTAGCGTGACTGCCTCC
GTCAAGATTTGGTCACTTGAGTCGGCTAATATTCAATCCTTCCCCTTGCAAGACTTGTAA