Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035984
CDS Infomation

pacid=37461177 polypeptide=PGSC0003DMP400024450 locus=PGSC0003DMG400013855 ID=PGSC0003DMT400035984.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCTTCCCTACTTGTGCATCGTGTCTGCTACATTGCTCTGTTTTTCACACTC
TGCTTCGCCGCTGACCCTTTCGTTAATTTTGAATTGGAGTACTCTTATATCACCGCTTCT
CCTCTTGGCGTTCCCCAACAGGTTGTAGCTGTGAATGGGAAATTTCCAGGTCCTATCCTT
AATGTTACAACCAATTATAATGTTGTGGTCGATGTGAAGAACAAATTGGATGAAGATCTT
CTTGTCACTTGGTCTGGAATTCAGATGCGACGCACTTCCTGGCAAGATGGTGTTCTTGGT
ACAAATTGCCCCATCCCTAAAGGTGGATGGAACTTCACTTACCAGTTTCAAGTAAAGGAT
CAGATTGGTAGCTTTTTCTATGCTCCTTCGGTCAACATGCAGAGGGCAGCAGGTGGTTTT
GGTTCTTTTATTGTCACGAACCGTAATATTATCCCTATTCCCTTTAGTCCTCCTGATGGG
GATATAGTGATAATTATTGGCGATTGGTACACCCGGAGCCATAAGACTTTGAGGAAGGAC
CTTGATGATGGGAAGCAATTGGGGATGCCAGATGGAGTACTTATTAATGGGAAAGGCCCA
TACAGATACAACACAACACTTGTACCTGATGGGATTGACCACGAAACCATAAATGTTGAT
CCAGGCAAAACCTATCGGGTTCGGGTGCACAATGTTGGAGTCTCTACTTGTTTGAATTTT
AGGATTCAAAATCATAATTTACTCTTGGTGGAGACGGAGGGATATTACACTTCACAGCAG
AATTATACTAGTGTAGATATTCATGTTGGGCAGTCATACACATTTTTGGTTACCATGGAT
CAGAATGCAAGTAGTGATTACTATATTGTGGCGAGTTCTAGGTTTGTAAATCAAACAATC
TGGCAAAAAGTAACTGGTGTTGGTATTTTGCATTATTCCAACTCCAAAGGAAAGGCAGCT
GGCCCCCTTCCAGACCCTCCAAATGATGTATATGACACATCGTATGCACTGAATCAGGCC
ATGTCCATCAGGCAAAACGTTTCTGCAAGTGGAGCTAGGCCGAATCCTCAAGGATCTTTC
CACTATGGTCAAATCAATGTCACAGATTTTTATTTGCTAAAGAGTGTGCCACCAGTATCG
ATCGATGGAAAGCTTCGAGCTACCTTTAATGGGATTTCATTCAAAAATCCTGTTACTCCA
ATTAGGCTTGCTGATCTATACTATGTGAAGGGTGACTACAAGCTTGATTTCCCAACCAAG
CCAATGAACAGACCACCCAAGGTGGACACGTCCATTATCAATGCCACATACAAGGGATTT
ATAGAAATCGTATTGCAGAACAATGACACTGTAGTCCAGAGCTTTCACATGGATGGTTAC
TCATTCTTTGTTGTTGGGATGGGCTTTGGAGAGTGGACAGAGAACAACAGGGGATCTTAT
AATAGATGGGATGCAATTTCCCGGTCTACGACTCAGGTTTTTCCTGGAGGATGGACAGCA
GTTTTGGTATCTCTCGACAATGTAGGGGTGTGGAATCTCAGAGCAGAAAACCTGGACAGG
TGGTACTTAGGGCAGGAAACGTATATGAGAATTATCAATCCTGAAGATCATAGCAACAAA
ACAGAAATGCCAGTGCCTGACAATGCTCTGTACTGTGGTGCCCTTGCTTCTATGCAAAAG
CAACAGAAAGTATCTTCAGCGACAACCACCCTATTTGGAAGCTCAGAGTTATTTTTTACA
TTGCTGTTGGTACTCTCTGCTGTCATCAGTCTTGTATCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400024450
PEP Infomation

pacid=37461177 transcript=PGSC0003DMT400035984 locus=PGSC0003DMG400013855 ID=PGSC0003DMT400035984.v4.03 annot-version=v4.03
Sequence

MASSSLLVHRVCYIALFFTLCFAADPFVNFELEYSYITASPLGVPQQVVAVNGKFPGPIL
NVTTNYNVVVDVKNKLDEDLLVTWSGIQMRRTSWQDGVLGTNCPIPKGGWNFTYQFQVKD
QIGSFFYAPSVNMQRAAGGFGSFIVTNRNIIPIPFSPPDGDIVIIIGDWYTRSHKTLRKD
LDDGKQLGMPDGVLINGKGPYRYNTTLVPDGIDHETINVDPGKTYRVRVHNVGVSTCLNF
RIQNHNLLLVETEGYYTSQQNYTSVDIHVGQSYTFLVTMDQNASSDYYIVASSRFVNQTI
WQKVTGVGILHYSNSKGKAAGPLPDPPNDVYDTSYALNQAMSIRQNVSASGARPNPQGSF
HYGQINVTDFYLLKSVPPVSIDGKLRATFNGISFKNPVTPIRLADLYYVKGDYKLDFPTK
PMNRPPKVDTSIINATYKGFIEIVLQNNDTVVQSFHMDGYSFFVVGMGFGEWTENNRGSY
NRWDAISRSTTQVFPGGWTAVLVSLDNVGVWNLRAENLDRWYLGQETYMRIINPEDHSNK
TEMPVPDNALYCGALASMQKQQKVSSATTTLFGSSELFFTLLLVLSAVISLVS*

Transcript Sequence

Transcript ID

PGSC0003DMT400035984
Transcript Infomation

pacid=37461177 locus=PGSC0003DMG400013855 ID=PGSC0003DMT400035984.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCTTCCCTACTTGTGCATCGTGTCTGCTACATTGCTCTGTTTTTCACACTC
TGCTTCGCCGCTGACCCTTTCGTTAATTTTGAATTGGAGTACTCTTATATCACCGCTTCT
CCTCTTGGCGTTCCCCAACAGGTTGTAGCTGTGAATGGGAAATTTCCAGGTCCTATCCTT
AATGTTACAACCAATTATAATGTTGTGGTCGATGTGAAGAACAAATTGGATGAAGATCTT
CTTGTCACTTGGTCTGGAATTCAGATGCGACGCACTTCCTGGCAAGATGGTGTTCTTGGT
ACAAATTGCCCCATCCCTAAAGGTGGATGGAACTTCACTTACCAGTTTCAAGTAAAGGAT
CAGATTGGTAGCTTTTTCTATGCTCCTTCGGTCAACATGCAGAGGGCAGCAGGTGGTTTT
GGTTCTTTTATTGTCACGAACCGTAATATTATCCCTATTCCCTTTAGTCCTCCTGATGGG
GATATAGTGATAATTATTGGCGATTGGTACACCCGGAGCCATAAGACTTTGAGGAAGGAC
CTTGATGATGGGAAGCAATTGGGGATGCCAGATGGAGTACTTATTAATGGGAAAGGCCCA
TACAGATACAACACAACACTTGTACCTGATGGGATTGACCACGAAACCATAAATGTTGAT
CCAGGCAAAACCTATCGGGTTCGGGTGCACAATGTTGGAGTCTCTACTTGTTTGAATTTT
AGGATTCAAAATCATAATTTACTCTTGGTGGAGACGGAGGGATATTACACTTCACAGCAG
AATTATACTAGTGTAGATATTCATGTTGGGCAGTCATACACATTTTTGGTTACCATGGAT
CAGAATGCAAGTAGTGATTACTATATTGTGGCGAGTTCTAGGTTTGTAAATCAAACAATC
TGGCAAAAAGTAACTGGTGTTGGTATTTTGCATTATTCCAACTCCAAAGGAAAGGCAGCT
GGCCCCCTTCCAGACCCTCCAAATGATGTATATGACACATCGTATGCACTGAATCAGGCC
ATGTCCATCAGGCAAAACGTTTCTGCAAGTGGAGCTAGGCCGAATCCTCAAGGATCTTTC
CACTATGGTCAAATCAATGTCACAGATTTTTATTTGCTAAAGAGTGTGCCACCAGTATCG
ATCGATGGAAAGCTTCGAGCTACCTTTAATGGGATTTCATTCAAAAATCCTGTTACTCCA
ATTAGGCTTGCTGATCTATACTATGTGAAGGGTGACTACAAGCTTGATTTCCCAACCAAG
CCAATGAACAGACCACCCAAGGTGGACACGTCCATTATCAATGCCACATACAAGGGATTT
ATAGAAATCGTATTGCAGAACAATGACACTGTAGTCCAGAGCTTTCACATGGATGGTTAC
TCATTCTTTGTTGTTGGGATGGGCTTTGGAGAGTGGACAGAGAACAACAGGGGATCTTAT
AATAGATGGGATGCAATTTCCCGGTCTACGACTCAGGTTTTTCCTGGAGGATGGACAGCA
GTTTTGGTATCTCTCGACAATGTAGGGGTGTGGAATCTCAGAGCAGAAAACCTGGACAGG
TGGTACTTAGGGCAGGAAACGTATATGAGAATTATCAATCCTGAAGATCATAGCAACAAA
ACAGAAATGCCAGTGCCTGACAATGCTCTGTACTGTGGTGCCCTTGCTTCTATGCAAAAG
CAACAGAAAGTATCTTCAGCGACAACCACCCTATTTGGAAGCTCAGAGTTATTTTTTACA
TTGCTGTTGGTACTCTCTGCTGTCATCAGTCTTGTATCCTAG