Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035914
CDS Infomation

pacid=37470070 polypeptide=PGSC0003DMP400024410 locus=PGSC0003DMG400013826 ID=PGSC0003DMT400035914.v4.03 annot-version=v4.03
Sequence

ATGAAGAGAGGGAAAGTTGAAGAGAAGGTTATGGGGCCTATGTTTCCAAGACTTCATGTT
AATGATACAGATAAAGGAGGTCCAAGAGCACCTCCAAGGAATAAGATGGCTCTATATGAG
CAGCTCAGTATACCTTCTCAGAGATTCAACTCTGGGGTTTTGCCTCTTGACCCTAACAAT
ACTTCAAAGATGGGCCCTCCATCCTCAAGTCAGGGGAGTGGGCATGACAGAGGTGGATAT
TTCCCTATACAACACCCTCCATCTAGACATCTAGCTGATAAACCACCTGGCCACAGTTCG
GATCCCAATACTCTCTTGCAACAATATGAATTGAAAAAGAGAACAGAAGAGGATGACTTT
ACGGTCCCCATCTTTGTTAATTCCAAGCTTGGTCATGCCAATAAGAGTCATAATCTGGAT
ATGGAAAAGCTCTCTCCCTCTGGTCCAGTGTTTTGTCCTAATAAAGAGTTGGAAGGAGTT
ACAGATCTAACTTTGAGACAACAGCGCAATAGCCAAAACAAGGAGAATCCCAAATGTACT
GTTGCTCGTAGAGAGAAAACAACCTCAAACTCTGCATCCAAGGAATGCAGATTGGATCCT
CAGGTTGGTTGTACTATCATACCTGAACCTGTTAAGGTTACATATGATGACAGTTCGTAT
CCTAGGAAAGCATTTATATCAGAAGAGCAGTTAACTGCTAATGATCTTGTTAATGATACG
GAATCCCAGGAAGATAAGGCACACAAATCATTACAAACAGGAAATTTGGACCGAGGTGAC
GACTTATCTGAGACTTCCAGAGTGGAATCTATATCTGGAACAGACATCTCTCCTGATGTC
ATTGTAGGAATAATTGGCCTAAAGCGTTTCTGGAAAGCCAGAAGAGCAATTGTCAACCAG
CAAAGAGTGTTTGCAGTCCAAGTGTTCGAGTTGCATCGACTAATAAAGGTACAAAGGCTC
ATTGCCGGGTCACCAAATAGTTCGCTCGAAGATCCTACTTATTTAGGCAAACCTTTAAAG
AGTTCGTCTGTCAAAAGACTTCCATTGGACTGTATTGTTAGAGAATCTCAAAGTGTTCTG
AAGCGCAAGCATGATTCTGAGAAGCCTAACTTCAGGATGGAATACTCTGCCGAAAGCACA
GTGGGAAAGGCATCTCTCTCTACTGTGCAAAATGGTAGTCAACTCTCTAACCACAAACCA
TTTTCAGGAAATCCACTGCCAACGCCTGTAACAAATGATTCTAATGCGGGTCCTTGGTGC
TTCCAACAACCTCCCGGGCACCAATGGTTGATCCCAGTGATGTCTCCTTCTGAAGGACTT
GTATACAAACCATTCCCTGGACCTGAATTCACGGGTCCTATTTGTGGAGGTGGGCCTGCA
GGATCGACTCCAACAATGGGGAACTTTTTTGCTCCAACATATGGAGTTCCTGCTCCTAAT
CCTCACTATCAAGGTATGGGAGTTCCTTTTGCACCTCCGACTGGTCATGGTTACTTTCGG
CAATATGGCATGCCAGTCATGAATCCACCAATTTCATCACCTGCTACTGAAGAATCAAAC
CAGTTTACCTTGCCTGGTTTACAACAGCAGTTATCTGGAGTGGTTGATAACTTCAACATT
CAACATCAGGACTCAAGTAATGTTCTAAATGAGAAGAATGATAACTTCCCAGATGTTGTG
AGGTTTCAAACCACAAAAGATAATGAGCTACAAGCCAGCACTGCAAGTAGTCCTATTGAG
AGAACTCATGAAACTTCCACAGGAGGAAGAAACATGCTTTCTCTTTTTCCCACATCTCCA
GTTACTGACAACCGTGATGGTAGCCCTCAGGCTTGTGTACCTGATAATCCAGCAAGAGTT
ATCAAGGTTGTACCTCACAATGCAAGGTCTGCCACAGAATCCGTGGCTCGGATATTTCAG
TCTATACAACAAGAGAGAAAACAATATGACTTAGGTTTCACACATCTATAA

Peptide Sequence

PEP ID

PGSC0003DMP400024410
PEP Infomation

pacid=37470070 transcript=PGSC0003DMT400035914 locus=PGSC0003DMG400013826 ID=PGSC0003DMT400035914.v4.03 annot-version=v4.03
Sequence

MKRGKVEEKVMGPMFPRLHVNDTDKGGPRAPPRNKMALYEQLSIPSQRFNSGVLPLDPNN
TSKMGPPSSSQGSGHDRGGYFPIQHPPSRHLADKPPGHSSDPNTLLQQYELKKRTEEDDF
TVPIFVNSKLGHANKSHNLDMEKLSPSGPVFCPNKELEGVTDLTLRQQRNSQNKENPKCT
VARREKTTSNSASKECRLDPQVGCTIIPEPVKVTYDDSSYPRKAFISEEQLTANDLVNDT
ESQEDKAHKSLQTGNLDRGDDLSETSRVESISGTDISPDVIVGIIGLKRFWKARRAIVNQ
QRVFAVQVFELHRLIKVQRLIAGSPNSSLEDPTYLGKPLKSSSVKRLPLDCIVRESQSVL
KRKHDSEKPNFRMEYSAESTVGKASLSTVQNGSQLSNHKPFSGNPLPTPVTNDSNAGPWC
FQQPPGHQWLIPVMSPSEGLVYKPFPGPEFTGPICGGGPAGSTPTMGNFFAPTYGVPAPN
PHYQGMGVPFAPPTGHGYFRQYGMPVMNPPISSPATEESNQFTLPGLQQQLSGVVDNFNI
QHQDSSNVLNEKNDNFPDVVRFQTTKDNELQASTASSPIERTHETSTGGRNMLSLFPTSP
VTDNRDGSPQACVPDNPARVIKVVPHNARSATESVARIFQSIQQERKQYDLGFTHL*

Transcript Sequence

Transcript ID

PGSC0003DMT400035914
Transcript Infomation

pacid=37470070 locus=PGSC0003DMG400013826 ID=PGSC0003DMT400035914.v4.03 annot-version=v4.03
Sequence

ATGAAGAGAGGGAAAGTTGAAGAGAAGGTTATGGGGCCTATGTTTCCAAGACTTCATGTT
AATGATACAGATAAAGGAGGTCCAAGAGCACCTCCAAGGAATAAGATGGCTCTATATGAG
CAGCTCAGTATACCTTCTCAGAGATTCAACTCTGGGGTTTTGCCTCTTGACCCTAACAAT
ACTTCAAAGATGGGCCCTCCATCCTCAAGTCAGGGGAGTGGGCATGACAGAGGTGGATAT
TTCCCTATACAACACCCTCCATCTAGACATCTAGCTGATAAACCACCTGGCCACAGTTCG
GATCCCAATACTCTCTTGCAACAATATGAATTGAAAAAGAGAACAGAAGAGGATGACTTT
ACGGTCCCCATCTTTGTTAATTCCAAGCTTGGTCATGCCAATAAGAGTCATAATCTGGAT
ATGGAAAAGCTCTCTCCCTCTGGTCCAGTGTTTTGTCCTAATAAAGAGTTGGAAGGAGTT
ACAGATCTAACTTTGAGACAACAGCGCAATAGCCAAAACAAGGAGAATCCCAAATGTACT
GTTGCTCGTAGAGAGAAAACAACCTCAAACTCTGCATCCAAGGAATGCAGATTGGATCCT
CAGGTTGGTTGTACTATCATACCTGAACCTGTTAAGGTTACATATGATGACAGTTCGTAT
CCTAGGAAAGCATTTATATCAGAAGAGCAGTTAACTGCTAATGATCTTGTTAATGATACG
GAATCCCAGGAAGATAAGGCACACAAATCATTACAAACAGGAAATTTGGACCGAGGTGAC
GACTTATCTGAGACTTCCAGAGTGGAATCTATATCTGGAACAGACATCTCTCCTGATGTC
ATTGTAGGAATAATTGGCCTAAAGCGTTTCTGGAAAGCCAGAAGAGCAATTGTCAACCAG
CAAAGAGTGTTTGCAGTCCAAGTGTTCGAGTTGCATCGACTAATAAAGGTACAAAGGCTC
ATTGCCGGGTCACCAAATAGTTCGCTCGAAGATCCTACTTATTTAGGCAAACCTTTAAAG
AGTTCGTCTGTCAAAAGACTTCCATTGGACTGTATTGTTAGAGAATCTCAAAGTGTTCTG
AAGCGCAAGCATGATTCTGAGAAGCCTAACTTCAGGATGGAATACTCTGCCGAAAGCACA
GTGGGAAAGGCATCTCTCTCTACTGTGCAAAATGGTAGTCAACTCTCTAACCACAAACCA
TTTTCAGGAAATCCACTGCCAACGCCTGTAACAAATGATTCTAATGCGGGTCCTTGGTGC
TTCCAACAACCTCCCGGGCACCAATGGTTGATCCCAGTGATGTCTCCTTCTGAAGGACTT
GTATACAAACCATTCCCTGGACCTGAATTCACGGGTCCTATTTGTGGAGGTGGGCCTGCA
GGATCGACTCCAACAATGGGGAACTTTTTTGCTCCAACATATGGAGTTCCTGCTCCTAAT
CCTCACTATCAAGGTATGGGAGTTCCTTTTGCACCTCCGACTGGTCATGGTTACTTTCGG
CAATATGGCATGCCAGTCATGAATCCACCAATTTCATCACCTGCTACTGAAGAATCAAAC
CAGTTTACCTTGCCTGGTTTACAACAGCAGTTATCTGGAGTGGTTGATAACTTCAACATT
CAACATCAGGACTCAAGTAATGTTCTAAATGAGAAGAATGATAACTTCCCAGATGTTGTG
AGGTTTCAAACCACAAAAGATAATGAGCTACAAGCCAGCACTGCAAGTAGTCCTATTGAG
AGAACTCATGAAACTTCCACAGGAGGAAGAAACATGCTTTCTCTTTTTCCCACATCTCCA
GTTACTGACAACCGTGATGGTAGCCCTCAGGCTTGTGTACCTGATAATCCAGCAAGAGTT
ATCAAGGTTGTACCTCACAATGCAAGGTCTGCCACAGAATCCGTGGCTCGGATATTTCAG
TCTATACAACAAGAGAGAAAACAATATGACTTAGGTTTCACACATCTATAA