Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035899
CDS Infomation

pacid=37473812 polypeptide=PGSC0003DMP400024397 locus=PGSC0003DMG400013821 ID=PGSC0003DMT400035899.v4.03 annot-version=v4.03
Sequence

ATGTCAGGAGGAACATTTGCACTGTATTCATTGATCTGCAGGTATGCAAATGTCAACCTT
CTTCCCAATCGACAGCCAGCTGATGAACACATCTCAAGTTTTAAGCTCAAGTTACCTACT
CCAGAACTGCAAAGGGCTTTAAATATAAAGGAAGTCTTGGAACGTAAATCTTCTCTAAAA
ACCCTTGTCTTGCTATTGGTTCTGATGGGAACATCAATGATCATAGGTGATGGTATCTTG
ACCCCAGCAATATCAGTTATGTCTGCTGTAAGTGGGCTGCAAGGTAGGGTCCCGGGATTT
GGCACAAATGCTCTTGTTTTCACTTCAATTATCATCCTTGGCGTATTGTTCAGTATACAG
CGATATGGGTCAAGCAAAGTGGGATTTACATTTGCACCTGCCCTGGCTTTATGGTTCTTC
AGTCTAGGGGCTATAGGAGTTTATAATCTTCTGAAGCATGATGTAACTGTCTTAAGGGCT
TTAAATCCAGCTTATATATATCTGTTCTTCAAGAAGAACTCAATCAATGGATGGTCAGCT
CTTGGTGGCTGTGTTTTATGCATCACAGGAGCGGAAGCAATGTTTGCTGATTTAGGTCAT
TTCTCTGTGAAGTCAATACAGATTGCTTTCACAAGCGTAGTGTTCCCCTGCCTTTTTTTG
GCCTACTTCGGCCAAGCTGCTTATCTAATGAAATTCCCAAATTCATCTGAGAGAATATTT
TATGATTCTGTGCCAGATGGTCTCTTTTGGCCAGTTTTTGGGTTAGCAACAGTAGCTGCT
ATAATTGCCAGCCAGGCCATGATATCTGCTTCATTTTCATGTGTTAAGCAAGCTATGGCT
CTTGGATGCTTCCCAAGATTGAAGATTATTCACACCTCAAAGAGGCACATGGGTCAAATT
TACATTCCTGTCATTAATTGGTTTTTGATGATAATGTGCATGCTTGTGGTTGCTGCCTTT
CAGAGCACGACAGACATATCTAATGCCTATGGCATAGCTGAAGTTGGTGTCATGATGGTT
AGCACGACTTTGGTTACAGTCGTAATGCTACTGATATGGCAAACAAATTTGTTTCTGGCT
ATCTTGTTTCCACTTATATTTGGAACTATAGAGCTTATTTATATGTCTGCTGTTCTATCC
AAGATCTTCGAGGGTGGTTGGCTTCCGCTAGTTTTTGCCTCTTGGTTCCTCTGTGTGATG
TATATTTGGAACTATGGGAGTGTCTTGAAGTACCAGAGTGAGGTCAAGCAGAAGATTTCA
ATGGATTTCATGCATGAGCTTGGCTCTTCTCTTGGGACGGTAAGGGTACCAGGGATTGGT
TTACTATACAATGAGCTGGTTCAAGGCATTCCCTCTATTTTTGCTCAGTTTCTATTAGAT
CTTCCAGCTATTCACTCTGTGATAGTCTTTGTCTGCATCAAATATGTGCCAGTACCTGTT
GTCCCTCAGGAAGAAAGGTTCTTGTTTCGAAGGGTTGGTCCGAAGGACTATCATATGTTC
CGTTGTGTAGCTAGATATGGCTATAAAGATGTCAGAAAAGAGGATCATCATGCATTTGAG
CAACTTTTGGTAGATAGCCTTGAGAAGTTTCTAAGAAAGGAGGCCCTGGATGTTGCTTTG
GAAATCAACCTGAATCAACCAGACCTTGATAGCATTTCTGTGAGGTCAAGGGATGAGTCT
GAAATACAAGATGGTGATGGTGATGGGATGGACGAGCTTAAGATTCCATTAATGCGTGAT
CAAAGAATGGAAACTTCAGGAGCATCAACATCAGAAGCATCCCTGACGTTACCAGCCAGT
GTTATGCCAGTTGATGAAGATCCTAGTCTGGAATATGAGCTCTCTGCTCTCCGAGAAGCC
ACAGAATCTGGATTTACATACTTGCTTGGACACGGGGACGTGAGGGCAAAGAAAAACTCT
TGGTTCATCAAGAAATTAAGCATAAATTACTTCTATGCATTCATGAGGAAGAATTGTAGA
GGAGGTGCTGCAACAATGCGCGTTCCTCACATGAATATTATCCAAGTAGGAATGACATAC
ATGGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024397
PEP Infomation

pacid=37473812 transcript=PGSC0003DMT400035899 locus=PGSC0003DMG400013821 ID=PGSC0003DMT400035899.v4.03 annot-version=v4.03
Sequence

MSGGTFALYSLICRYANVNLLPNRQPADEHISSFKLKLPTPELQRALNIKEVLERKSSLK
TLVLLLVLMGTSMIIGDGILTPAISVMSAVSGLQGRVPGFGTNALVFTSIIILGVLFSIQ
RYGSSKVGFTFAPALALWFFSLGAIGVYNLLKHDVTVLRALNPAYIYLFFKKNSINGWSA
LGGCVLCITGAEAMFADLGHFSVKSIQIAFTSVVFPCLFLAYFGQAAYLMKFPNSSERIF
YDSVPDGLFWPVFGLATVAAIIASQAMISASFSCVKQAMALGCFPRLKIIHTSKRHMGQI
YIPVINWFLMIMCMLVVAAFQSTTDISNAYGIAEVGVMMVSTTLVTVVMLLIWQTNLFLA
ILFPLIFGTIELIYMSAVLSKIFEGGWLPLVFASWFLCVMYIWNYGSVLKYQSEVKQKIS
MDFMHELGSSLGTVRVPGIGLLYNELVQGIPSIFAQFLLDLPAIHSVIVFVCIKYVPVPV
VPQEERFLFRRVGPKDYHMFRCVARYGYKDVRKEDHHAFEQLLVDSLEKFLRKEALDVAL
EINLNQPDLDSISVRSRDESEIQDGDGDGMDELKIPLMRDQRMETSGASTSEASLTLPAS
VMPVDEDPSLEYELSALREATESGFTYLLGHGDVRAKKNSWFIKKLSINYFYAFMRKNCR
GGAATMRVPHMNIIQVGMTYMV*

Transcript Sequence

Transcript ID

PGSC0003DMT400035899
Transcript Infomation

pacid=37473812 locus=PGSC0003DMG400013821 ID=PGSC0003DMT400035899.v4.03 annot-version=v4.03
Sequence

ATGTCAGGAGGAACATTTGCACTGTATTCATTGATCTGCAGGTATGCAAATGTCAACCTT
CTTCCCAATCGACAGCCAGCTGATGAACACATCTCAAGTTTTAAGCTCAAGTTACCTACT
CCAGAACTGCAAAGGGCTTTAAATATAAAGGAAGTCTTGGAACGTAAATCTTCTCTAAAA
ACCCTTGTCTTGCTATTGGTTCTGATGGGAACATCAATGATCATAGGTGATGGTATCTTG
ACCCCAGCAATATCAGTTATGTCTGCTGTAAGTGGGCTGCAAGGTAGGGTCCCGGGATTT
GGCACAAATGCTCTTGTTTTCACTTCAATTATCATCCTTGGCGTATTGTTCAGTATACAG
CGATATGGGTCAAGCAAAGTGGGATTTACATTTGCACCTGCCCTGGCTTTATGGTTCTTC
AGTCTAGGGGCTATAGGAGTTTATAATCTTCTGAAGCATGATGTAACTGTCTTAAGGGCT
TTAAATCCAGCTTATATATATCTGTTCTTCAAGAAGAACTCAATCAATGGATGGTCAGCT
CTTGGTGGCTGTGTTTTATGCATCACAGGAGCGGAAGCAATGTTTGCTGATTTAGGTCAT
TTCTCTGTGAAGTCAATACAGATTGCTTTCACAAGCGTAGTGTTCCCCTGCCTTTTTTTG
GCCTACTTCGGCCAAGCTGCTTATCTAATGAAATTCCCAAATTCATCTGAGAGAATATTT
TATGATTCTGTGCCAGATGGTCTCTTTTGGCCAGTTTTTGGGTTAGCAACAGTAGCTGCT
ATAATTGCCAGCCAGGCCATGATATCTGCTTCATTTTCATGTGTTAAGCAAGCTATGGCT
CTTGGATGCTTCCCAAGATTGAAGATTATTCACACCTCAAAGAGGCACATGGGTCAAATT
TACATTCCTGTCATTAATTGGTTTTTGATGATAATGTGCATGCTTGTGGTTGCTGCCTTT
CAGAGCACGACAGACATATCTAATGCCTATGGCATAGCTGAAGTTGGTGTCATGATGGTT
AGCACGACTTTGGTTACAGTCGTAATGCTACTGATATGGCAAACAAATTTGTTTCTGGCT
ATCTTGTTTCCACTTATATTTGGAACTATAGAGCTTATTTATATGTCTGCTGTTCTATCC
AAGATCTTCGAGGGTGGTTGGCTTCCGCTAGTTTTTGCCTCTTGGTTCCTCTGTGTGATG
TATATTTGGAACTATGGGAGTGTCTTGAAGTACCAGAGTGAGGTCAAGCAGAAGATTTCA
ATGGATTTCATGCATGAGCTTGGCTCTTCTCTTGGGACGGTAAGGGTACCAGGGATTGGT
TTACTATACAATGAGCTGGTTCAAGGCATTCCCTCTATTTTTGCTCAGTTTCTATTAGAT
CTTCCAGCTATTCACTCTGTGATAGTCTTTGTCTGCATCAAATATGTGCCAGTACCTGTT
GTCCCTCAGGAAGAAAGGTTCTTGTTTCGAAGGGTTGGTCCGAAGGACTATCATATGTTC
CGTTGTGTAGCTAGATATGGCTATAAAGATGTCAGAAAAGAGGATCATCATGCATTTGAG
CAACTTTTGGTAGATAGCCTTGAGAAGTTTCTAAGAAAGGAGGCCCTGGATGTTGCTTTG
GAAATCAACCTGAATCAACCAGACCTTGATAGCATTTCTGTGAGGTCAAGGGATGAGTCT
GAAATACAAGATGGTGATGGTGATGGGATGGACGAGCTTAAGATTCCATTAATGCGTGAT
CAAAGAATGGAAACTTCAGGAGCATCAACATCAGAAGCATCCCTGACGTTACCAGCCAGT
GTTATGCCAGTTGATGAAGATCCTAGTCTGGAATATGAGCTCTCTGCTCTCCGAGAAGCC
ACAGAATCTGGATTTACATACTTGCTTGGACACGGGGACGTGAGGGCAAAGAAAAACTCT
TGGTTCATCAAGAAATTAAGCATAAATTACTTCTATGCATTCATGAGGAAGAATTGTAGA
GGAGGTGCTGCAACAATGCGCGTTCCTCACATGAATATTATCCAAGTAGGAATGACATAC
ATGGTTTGA