Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035881
CDS Infomation

pacid=37451380 polypeptide=PGSC0003DMP400024384 locus=PGSC0003DMG400013814 ID=PGSC0003DMT400035881.v4.03 annot-version=v4.03
Sequence

ATGGCAACAGACGTTGTAACGGTGGGAAATAAAACAGAGGAAAATATAGTATGTTATTCA
CCATCCATGATTACAACGAATGGAGTATGGCAGGGTGAAAATCCACTTGATTATGCATTG
CCACTCTTCATTTTGCAATTGACATTAGTTGTTATCTTTACTCGTATTCTCGTTTTCATC
TTGAAACCATTTCGACAACCTCGTGTTATTGCTGAGATTCTTGGTGGTGTAATTTTGGGG
CCATCGGTATTAGGAAGAAGTAAAAGGTTTACTGATACAGTGTTTCCTCTACGAAGTGTA
ATGGTGCTTGAGACAATGGCAAATATAGGCCTTCTTTACTTTATTTTTCTGGTTGGAGTA
GAAATGGACATTGCTGTTATCCGAAGAACAGGGAAAAAGGCAATACCTATAGCTCTAGCA
GGGATGGTAGTGCCATTTCTTATAGGGGTTTCATTTTCCTTCATGTTGCATAAAAGTACA
CAAGAGACAAAACATGGGACTTTCGTGCTCTTCCTTGGTGTTGCACTTTCTGTTACTGCA
TTCCCTGTTCTTGCACGAATTCTTGCAGAGCTGAAACTTATCAACAGTGAAATTGGTAGG
ATAGCCATGTCGGCTGCTCTTATAAATGATATTTTCGCGTGGATTCTCTTGGCGTTTGCC
ATTGCCTTTTCTGAGAACAAAACTATGGCTTTGACTTCTGTTTGGGTACTTCTTTCTACA
GCAGCGTTTGTTGTTTTCTGTGTTATAATTATCAGGCCTTTAATTGGATGGATGATAAAG
CGAACTCCAGAAGGCGAATCCATAAGTGAGTTCTCTATATGTATCATTCTCTCAGGAGTC
ATGATATGTGGATTTATAACAGATGCTATTGGAATGCATTCTATTTTTGGGGCTTTTATG
TTTGGTTTGGTTATTCCTAACGGTCCTCTTGGCCTTACACTTAACGAAAAGTTAGAGGAC
TTTGTTTCGGGGCTTTTGTTGCCTCTTTTCTTTGTCATTAGTGGTCTCAAGACGGAGATT
AACGCCATTGATGGAGTTGGTTCATGGGCAATATTAGCTCTGGCCATAGTCTTAGCTTGT
GTTGGAAAGATTGCTGGAACAGTCCTTATAACACTGTATTACAGAATACCAATCCATGAA
GGCATTACTCTTGGTCTCCTCATGAATGCCAAAGGACTCATTGAGATGATTGTGATCAAT
GTTGGTAAAGACCAAAAGGTTCTTGATGACAAATCTTTTGCAATTATGGTTGTGGCAACT
GTGCTTATGACTGCAATTATCATCCCATTCGTGACGCTGATTTACAAGCCAGCAAGAAAG
TTCGCGCCATATAAAAGAAGAACAGTTCAAAGTACAAAACCAGATAGCGAATTCAGGGTA
CTGGCTTGCATCCATACACCTAGAAATGTTCCAACAATCATCAATCTTCTTGAAGCATCT
TGTCCTACTAAGAAATCTCCAATATGTGTATATGTCCTCCACCTTGTCGAGCTCACTGGA
CGCTCGTCTGCCATGCTAATTGTCCATAATACACGAAAATCTGGCAGGCCAGCTCTTAAC
AGAACTCAAGCTCAATCGGATCATATTATCAATGCATTCGAGAACTTTGAGCAACATGTT
GGAAGTGTCTCCGTGCAACCCCTCACTGCCATCTCCCCTTACTCCACCATGCACGAAGAC
ATTTGCACCGTGGCTGAGGACAAACGAGTGGCGTTTCTAATCATTCCTTTTCACAAGCAG
CAAACAGTTGATGGTGGAATGGAAATCACAAATCCAAATTTTCGAACGATAAACCAAAAT
GTATTAGCAAATGCACCTTGTTCTGTTGGGATACTTGTCGACAGAGGACTAAGTGGTTCC
ACAAGGTTAGCAGCAAATCAAGTTTCTCACCATGTGGCTGTACTATTCTTTGGTGGACCG
GATGATCGTGAAGCATTGTCCTACGGATTGAGAATGAGAGAACATCCCGGGATCAACCTC
ACCGTCATGAGATTCCTCCCTGGAGTATCTGCACTTGAAGAGGCAAGATCAGGTTCAAGA
AGAAGTAATATGAATGATCCAAATGTACTAACAATAGTAACAGATGACGACAAAGAAAAA
CAGCTAGACGAGGACTATGTCAGCGCGTTCAGGTTAAGAACAGCTAATGATGATTCAGTT
GTATACATTGAAAGAGTAGTGAATCACGGAGAAGAGACAGTAGCAGCAATAAGGACTATA
GATCAATCACATGACCTGTTCATAGTTGGCAGAGGACAAGGCACCATATCGCCGTTGACA
GCAGGACTTACTGATTGGAGCGAGTGCCCGGAGTTAGGTGCAATTGGAGATCTATTGGCA
TCATCAGATAATGCAGCAATTGTTTCAGTGTTAGTAGTGCAACAATATGTAGGAATGGGG
CATGGGGATCATATTCTCACACCAGACAGTCCTGGACAACAACTACATGAACATTTCAAC
TTCGGCAATACGAATAATCGGACACAAATCAGAGGACAACAACCTCAATTCCATACACAA
CCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024384
PEP Infomation

pacid=37451380 transcript=PGSC0003DMT400035881 locus=PGSC0003DMG400013814 ID=PGSC0003DMT400035881.v4.03 annot-version=v4.03
Sequence

MATDVVTVGNKTEENIVCYSPSMITTNGVWQGENPLDYALPLFILQLTLVVIFTRILVFI
LKPFRQPRVIAEILGGVILGPSVLGRSKRFTDTVFPLRSVMVLETMANIGLLYFIFLVGV
EMDIAVIRRTGKKAIPIALAGMVVPFLIGVSFSFMLHKSTQETKHGTFVLFLGVALSVTA
FPVLARILAELKLINSEIGRIAMSAALINDIFAWILLAFAIAFSENKTMALTSVWVLLST
AAFVVFCVIIIRPLIGWMIKRTPEGESISEFSICIILSGVMICGFITDAIGMHSIFGAFM
FGLVIPNGPLGLTLNEKLEDFVSGLLLPLFFVISGLKTEINAIDGVGSWAILALAIVLAC
VGKIAGTVLITLYYRIPIHEGITLGLLMNAKGLIEMIVINVGKDQKVLDDKSFAIMVVAT
VLMTAIIIPFVTLIYKPARKFAPYKRRTVQSTKPDSEFRVLACIHTPRNVPTIINLLEAS
CPTKKSPICVYVLHLVELTGRSSAMLIVHNTRKSGRPALNRTQAQSDHIINAFENFEQHV
GSVSVQPLTAISPYSTMHEDICTVAEDKRVAFLIIPFHKQQTVDGGMEITNPNFRTINQN
VLANAPCSVGILVDRGLSGSTRLAANQVSHHVAVLFFGGPDDREALSYGLRMREHPGINL
TVMRFLPGVSALEEARSGSRRSNMNDPNVLTIVTDDDKEKQLDEDYVSAFRLRTANDDSV
VYIERVVNHGEETVAAIRTIDQSHDLFIVGRGQGTISPLTAGLTDWSECPELGAIGDLLA
SSDNAAIVSVLVVQQYVGMGHGDHILTPDSPGQQLHEHFNFGNTNNRTQIRGQQPQFHTQ
P*

Transcript Sequence

Transcript ID

PGSC0003DMT400035881
Transcript Infomation

pacid=37451380 locus=PGSC0003DMG400013814 ID=PGSC0003DMT400035881.v4.03 annot-version=v4.03
Sequence

ATGGCAACAGACGTTGTAACGGTGGGAAATAAAACAGAGGAAAATATAGTATGTTATTCA
CCATCCATGATTACAACGAATGGAGTATGGCAGGGTGAAAATCCACTTGATTATGCATTG
CCACTCTTCATTTTGCAATTGACATTAGTTGTTATCTTTACTCGTATTCTCGTTTTCATC
TTGAAACCATTTCGACAACCTCGTGTTATTGCTGAGATTCTTGGTGGTGTAATTTTGGGG
CCATCGGTATTAGGAAGAAGTAAAAGGTTTACTGATACAGTGTTTCCTCTACGAAGTGTA
ATGGTGCTTGAGACAATGGCAAATATAGGCCTTCTTTACTTTATTTTTCTGGTTGGAGTA
GAAATGGACATTGCTGTTATCCGAAGAACAGGGAAAAAGGCAATACCTATAGCTCTAGCA
GGGATGGTAGTGCCATTTCTTATAGGGGTTTCATTTTCCTTCATGTTGCATAAAAGTACA
CAAGAGACAAAACATGGGACTTTCGTGCTCTTCCTTGGTGTTGCACTTTCTGTTACTGCA
TTCCCTGTTCTTGCACGAATTCTTGCAGAGCTGAAACTTATCAACAGTGAAATTGGTAGG
ATAGCCATGTCGGCTGCTCTTATAAATGATATTTTCGCGTGGATTCTCTTGGCGTTTGCC
ATTGCCTTTTCTGAGAACAAAACTATGGCTTTGACTTCTGTTTGGGTACTTCTTTCTACA
GCAGCGTTTGTTGTTTTCTGTGTTATAATTATCAGGCCTTTAATTGGATGGATGATAAAG
CGAACTCCAGAAGGCGAATCCATAAGTGAGTTCTCTATATGTATCATTCTCTCAGGAGTC
ATGATATGTGGATTTATAACAGATGCTATTGGAATGCATTCTATTTTTGGGGCTTTTATG
TTTGGTTTGGTTATTCCTAACGGTCCTCTTGGCCTTACACTTAACGAAAAGTTAGAGGAC
TTTGTTTCGGGGCTTTTGTTGCCTCTTTTCTTTGTCATTAGTGGTCTCAAGACGGAGATT
AACGCCATTGATGGAGTTGGTTCATGGGCAATATTAGCTCTGGCCATAGTCTTAGCTTGT
GTTGGAAAGATTGCTGGAACAGTCCTTATAACACTGTATTACAGAATACCAATCCATGAA
GGCATTACTCTTGGTCTCCTCATGAATGCCAAAGGACTCATTGAGATGATTGTGATCAAT
GTTGGTAAAGACCAAAAGGTTCTTGATGACAAATCTTTTGCAATTATGGTTGTGGCAACT
GTGCTTATGACTGCAATTATCATCCCATTCGTGACGCTGATTTACAAGCCAGCAAGAAAG
TTCGCGCCATATAAAAGAAGAACAGTTCAAAGTACAAAACCAGATAGCGAATTCAGGGTA
CTGGCTTGCATCCATACACCTAGAAATGTTCCAACAATCATCAATCTTCTTGAAGCATCT
TGTCCTACTAAGAAATCTCCAATATGTGTATATGTCCTCCACCTTGTCGAGCTCACTGGA
CGCTCGTCTGCCATGCTAATTGTCCATAATACACGAAAATCTGGCAGGCCAGCTCTTAAC
AGAACTCAAGCTCAATCGGATCATATTATCAATGCATTCGAGAACTTTGAGCAACATGTT
GGAAGTGTCTCCGTGCAACCCCTCACTGCCATCTCCCCTTACTCCACCATGCACGAAGAC
ATTTGCACCGTGGCTGAGGACAAACGAGTGGCGTTTCTAATCATTCCTTTTCACAAGCAG
CAAACAGTTGATGGTGGAATGGAAATCACAAATCCAAATTTTCGAACGATAAACCAAAAT
GTATTAGCAAATGCACCTTGTTCTGTTGGGATACTTGTCGACAGAGGACTAAGTGGTTCC
ACAAGGTTAGCAGCAAATCAAGTTTCTCACCATGTGGCTGTACTATTCTTTGGTGGACCG
GATGATCGTGAAGCATTGTCCTACGGATTGAGAATGAGAGAACATCCCGGGATCAACCTC
ACCGTCATGAGATTCCTCCCTGGAGTATCTGCACTTGAAGAGGCAAGATCAGGTTCAAGA
AGAAGTAATATGAATGATCCAAATGTACTAACAATAGTAACAGATGACGACAAAGAAAAA
CAGCTAGACGAGGACTATGTCAGCGCGTTCAGGTTAAGAACAGCTAATGATGATTCAGTT
GTATACATTGAAAGAGTAGTGAATCACGGAGAAGAGACAGTAGCAGCAATAAGGACTATA
GATCAATCACATGACCTGTTCATAGTTGGCAGAGGACAAGGCACCATATCGCCGTTGACA
GCAGGACTTACTGATTGGAGCGAGTGCCCGGAGTTAGGTGCAATTGGAGATCTATTGGCA
TCATCAGATAATGCAGCAATTGTTTCAGTGTTAGTAGTGCAACAATATGTAGGAATGGGG
CATGGGGATCATATTCTCACACCAGACAGTCCTGGACAACAACTACATGAACATTTCAAC
TTCGGCAATACGAATAATCGGACACAAATCAGAGGACAACAACCTCAATTCCATACACAA
CCCTGA