Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035730
CDS Infomation

pacid=37448921 polypeptide=PGSC0003DMP400024295 locus=PGSC0003DMG400013743 ID=PGSC0003DMT400035730.v4.03 annot-version=v4.03
Sequence

ATGTATGATCCCAACTCGTTTGTAATCGACGAGGCGTATGAGTTCTCAGCGCCCAGATTT
TATGACTTTGTTGATGAAGAAACGGAAGACGAAACACGGAAAGCTGAGCATTGGTTCCAC
ATTTCAAGAAGCTATGCTCCTTCTCCTTTTATGCCAAAAATCAAAACTGCTAGAATGGTT
CAACTTGAGAGCCTATGTGATTTCACTGATGCTGATGAGTTGCAGGATAACACAAGGACT
GCTGCTGTGCTCACTTCTTCTAAAAGTAAAGACGAGGTAACGCCAAATTTGATCATACCA
GAACCTTGCACCAGTCTTCCTAATCTGGAATCTGAAGAGAAGAAGCAGTCTACTGTGCGA
GAAACTTGCACGCCCGGACCAACAATAACAGCTCAGAAGAACGACTCTCGGAAGACTAAC
TCCAAGAGGCAACAAACTGCTAAAAAGATTGCAAGCATACTTAGAAACCCTTCAGCATTA
AAGTCAAAAACTCAACCACAACAGTCACATCTGAGGAGTTCTAATCAAGCTACTGTTAGA
AAGCAAGCCATTAACAAAAGTGATGTTGGAACTCCAAATTTTGCTCAAGAAAATCAAGCA
GTAAAGAGACAAAAACTAGAAGAGGGAAAATCTAGGAAGATTCTTGATATCAAACCTCCT
CAACATTTGCCACACAAAACAAGACTTGGGGTAGCTAATAGCAGCTCTAACTTGTTCGCA
TCTGCAGCTAAAACTCGAAAAGAGGAGAGAAAGATGTATGTTAGGCCACTTGTTTCCCCG
TTTGTTTCAACAGCAGAAATGATAAAGAAATTCCAATCTGGCACAAGGGAAAATTCACTG
CCTTGCATGAGCAATTCTACTTCAAATGGTGATCCGACTGGACGAGCACAGAGAAAGCCA
AAACTTACATTAACCAGGCCTAAAGAACCCGAATTTGAAACAGCTCAACGTGTCCGTCCA
ACAAGGGTGAAGAGTTCAGCTGAACTTGAGGAAGAAATGATGGCCAAAATTCCCAAATTT
AAGGCTCACCCAGTTAACAAAAAGATTTTGGAAGCTCCAACTCAACCATTATTATTACCT
AAAAGTACACCCCAACTTCCAGAATTTAAGGAGTTTCACTTGGAAACAATGGCAAGGGCC
AATAAGAACGTGGATACAACTTCAGTTCAATCAATAGAATCTTCTTCTCAGAGTCATCAG
TGGCAGCCACATCTTACAGCACCTAAATCACCTGTACTTAAAACATCACTAAGAGCACGA
CCTCCAATTGCCAAAAGCACAGAAGAATTGGAAAAGGAAGAACTTGAAAAAGCGCCAAAG
TTCAGGGCAAGGCCTTTGAATAAGAAGATTCTTGAAAGTAAAGGAGATTTGGGAATGTTC
TGCAACACAAAGAGGCAGGTGACTGTGCCTCAGGAATTTCACTTTGCCACAAATGAAAGG
ATTCTGCCTCAAGCTAACTTTGATGATCTGTTTGACAAGCTTTCCTTGTATTCTCAACCT
CAAAATGACAAGAATGTTCTCAGAAACACTATACCAAATCCTTTTCATCTATACACCGAG
GAACGAGGAGTTGAGAAAGAGAGGAAGTTGTTCTCTGAACTTTTACAGAAACAGATGGAG
GAAGATAGGTCAAGAAATCCCAAAGCAACTCCATATCCTTATACTACTGATTATCCCGTG
ATTCCACCAAAACCAGAGCCAAAACCTTGCACGAAGACAGAACCTTTCGAACTTGAGAGT
CTCATTAGGCATGAAGAGGAGATGAGAAGAGAAATGGAAGAAAGGAAGAGATTGGAGGAG
GAAGAAGCTAACATGAGGTTGTTCAAGGCGCAACCAATCTTGATTGAGGATCCAATTCCA
GTTCCTGAGAAAGAACGTAAACCATTCACTGAGGTTCAGGAATTCAATCTACATGTAAAT
CACCGCGCTGTTGACAGAGCTGAATTTGATAAGAAGATTAAGGAGAAAGAAATGATGTAT
AAGAGGTATCAGGAGGAGGCAGAATGTGCAAGAATGATGGAAGAGGAGAAGGCCTTAAAA
CAACTAAGGAGAACTTTGGTACCGCTTGCAAGACCTGTGCCTAATTTTGATCATCCTTTC
CTACCTCAAAAGTCTTCCAAACATGTGACAAGACCAAGCTCCCCCAAGCTACAGGTTATT
AAAAGGAAAGAGAGGAGGAAAATGTTCTGCCCCTATGCAGCAGTTTCCAGTGCTGCTGCC
TCTCAAATGAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024295
PEP Infomation

pacid=37448921 transcript=PGSC0003DMT400035730 locus=PGSC0003DMG400013743 ID=PGSC0003DMT400035730.v4.03 annot-version=v4.03
Sequence

MYDPNSFVIDEAYEFSAPRFYDFVDEETEDETRKAEHWFHISRSYAPSPFMPKIKTARMV
QLESLCDFTDADELQDNTRTAAVLTSSKSKDEVTPNLIIPEPCTSLPNLESEEKKQSTVR
ETCTPGPTITAQKNDSRKTNSKRQQTAKKIASILRNPSALKSKTQPQQSHLRSSNQATVR
KQAINKSDVGTPNFAQENQAVKRQKLEEGKSRKILDIKPPQHLPHKTRLGVANSSSNLFA
SAAKTRKEERKMYVRPLVSPFVSTAEMIKKFQSGTRENSLPCMSNSTSNGDPTGRAQRKP
KLTLTRPKEPEFETAQRVRPTRVKSSAELEEEMMAKIPKFKAHPVNKKILEAPTQPLLLP
KSTPQLPEFKEFHLETMARANKNVDTTSVQSIESSSQSHQWQPHLTAPKSPVLKTSLRAR
PPIAKSTEELEKEELEKAPKFRARPLNKKILESKGDLGMFCNTKRQVTVPQEFHFATNER
ILPQANFDDLFDKLSLYSQPQNDKNVLRNTIPNPFHLYTEERGVEKERKLFSELLQKQME
EDRSRNPKATPYPYTTDYPVIPPKPEPKPCTKTEPFELESLIRHEEEMRREMEERKRLEE
EEANMRLFKAQPILIEDPIPVPEKERKPFTEVQEFNLHVNHRAVDRAEFDKKIKEKEMMY
KRYQEEAECARMMEEEKALKQLRRTLVPLARPVPNFDHPFLPQKSSKHVTRPSSPKLQVI
KRKERRKMFCPYAAVSSAAASQMR*

Transcript Sequence

Transcript ID

PGSC0003DMT400035730
Transcript Infomation

pacid=37448921 locus=PGSC0003DMG400013743 ID=PGSC0003DMT400035730.v4.03 annot-version=v4.03
Sequence

ATGTATGATCCCAACTCGTTTGTAATCGACGAGGCGTATGAGTTCTCAGCGCCCAGATTT
TATGACTTTGTTGATGAAGAAACGGAAGACGAAACACGGAAAGCTGAGCATTGGTTCCAC
ATTTCAAGAAGCTATGCTCCTTCTCCTTTTATGCCAAAAATCAAAACTGCTAGAATGGTT
CAACTTGAGAGCCTATGTGATTTCACTGATGCTGATGAGTTGCAGGATAACACAAGGACT
GCTGCTGTGCTCACTTCTTCTAAAAGTAAAGACGAGGTAACGCCAAATTTGATCATACCA
GAACCTTGCACCAGTCTTCCTAATCTGGAATCTGAAGAGAAGAAGCAGTCTACTGTGCGA
GAAACTTGCACGCCCGGACCAACAATAACAGCTCAGAAGAACGACTCTCGGAAGACTAAC
TCCAAGAGGCAACAAACTGCTAAAAAGATTGCAAGCATACTTAGAAACCCTTCAGCATTA
AAGTCAAAAACTCAACCACAACAGTCACATCTGAGGAGTTCTAATCAAGCTACTGTTAGA
AAGCAAGCCATTAACAAAAGTGATGTTGGAACTCCAAATTTTGCTCAAGAAAATCAAGCA
GTAAAGAGACAAAAACTAGAAGAGGGAAAATCTAGGAAGATTCTTGATATCAAACCTCCT
CAACATTTGCCACACAAAACAAGACTTGGGGTAGCTAATAGCAGCTCTAACTTGTTCGCA
TCTGCAGCTAAAACTCGAAAAGAGGAGAGAAAGATGTATGTTAGGCCACTTGTTTCCCCG
TTTGTTTCAACAGCAGAAATGATAAAGAAATTCCAATCTGGCACAAGGGAAAATTCACTG
CCTTGCATGAGCAATTCTACTTCAAATGGTGATCCGACTGGACGAGCACAGAGAAAGCCA
AAACTTACATTAACCAGGCCTAAAGAACCCGAATTTGAAACAGCTCAACGTGTCCGTCCA
ACAAGGGTGAAGAGTTCAGCTGAACTTGAGGAAGAAATGATGGCCAAAATTCCCAAATTT
AAGGCTCACCCAGTTAACAAAAAGATTTTGGAAGCTCCAACTCAACCATTATTATTACCT
AAAAGTACACCCCAACTTCCAGAATTTAAGGAGTTTCACTTGGAAACAATGGCAAGGGCC
AATAAGAACGTGGATACAACTTCAGTTCAATCAATAGAATCTTCTTCTCAGAGTCATCAG
TGGCAGCCACATCTTACAGCACCTAAATCACCTGTACTTAAAACATCACTAAGAGCACGA
CCTCCAATTGCCAAAAGCACAGAAGAATTGGAAAAGGAAGAACTTGAAAAAGCGCCAAAG
TTCAGGGCAAGGCCTTTGAATAAGAAGATTCTTGAAAGTAAAGGAGATTTGGGAATGTTC
TGCAACACAAAGAGGCAGGTGACTGTGCCTCAGGAATTTCACTTTGCCACAAATGAAAGG
ATTCTGCCTCAAGCTAACTTTGATGATCTGTTTGACAAGCTTTCCTTGTATTCTCAACCT
CAAAATGACAAGAATGTTCTCAGAAACACTATACCAAATCCTTTTCATCTATACACCGAG
GAACGAGGAGTTGAGAAAGAGAGGAAGTTGTTCTCTGAACTTTTACAGAAACAGATGGAG
GAAGATAGGTCAAGAAATCCCAAAGCAACTCCATATCCTTATACTACTGATTATCCCGTG
ATTCCACCAAAACCAGAGCCAAAACCTTGCACGAAGACAGAACCTTTCGAACTTGAGAGT
CTCATTAGGCATGAAGAGGAGATGAGAAGAGAAATGGAAGAAAGGAAGAGATTGGAGGAG
GAAGAAGCTAACATGAGGTTGTTCAAGGCGCAACCAATCTTGATTGAGGATCCAATTCCA
GTTCCTGAGAAAGAACGTAAACCATTCACTGAGGTTCAGGAATTCAATCTACATGTAAAT
CACCGCGCTGTTGACAGAGCTGAATTTGATAAGAAGATTAAGGAGAAAGAAATGATGTAT
AAGAGGTATCAGGAGGAGGCAGAATGTGCAAGAATGATGGAAGAGGAGAAGGCCTTAAAA
CAACTAAGGAGAACTTTGGTACCGCTTGCAAGACCTGTGCCTAATTTTGATCATCCTTTC
CTACCTCAAAAGTCTTCCAAACATGTGACAAGACCAAGCTCCCCCAAGCTACAGGTTATT
AAAAGGAAAGAGAGGAGGAAAATGTTCTGCCCCTATGCAGCAGTTTCCAGTGCTGCTGCC
TCTCAAATGAGGTGA