Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035671
CDS Infomation

pacid=37469868 polypeptide=PGSC0003DMP400024259 locus=PGSC0003DMG400013720 ID=PGSC0003DMT400035671.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAGGTGGAGGAGATCAAGAAACAAATTTAGAATTTACACCAACATGGATTGTT
GCCTTAGTCTGCACTGTCATAGTTGCTATATCTCTTCTTGTTGAAAGAATTATTCACTAT
GGTGGCAAGTATTTGCTCAAGAAAAACCAGAAGCCACTCTATGAAGCCTTACAAAAGATC
AAAGAAGAGTTGATGTTGTTGGGATTCATATCACTGTTATTGACAGTGTTGCAAGAGAGA
ATTCTTAAAATATGCATCCCAAAACACTTGACTAATCAATGGCTCCCTTGTAAAAAGGAT
GGTGATGTCAATGAAACTGTCCACTTTCAGACTAATTTCTTCTCTTTAGTTCCGGGAGGA
AGGCGCCTTCTTGCTGAATCTGCTAATTCTGGTTATTGTGAAGCTAAGGACAAGGCACCA
TTGTTATCTCTCACAGCATTGCATCATCTCCATACCTTTATCTTTGTGCTGGCTGTTTCA
CATGTTACTTTCTCAGCTCTTACAATTCTATTTGGAGGTATAAAGATACGTCAGTGGAAA
TCTTGGGAGGATTCTATCCAGAAAGAGGAATATAATCCAGAAGAAGTACTTCGATCGAAA
GTAACACATGTTCATGATCATGATTTTATCAAGGGCCGGTTTCTAGGATTTGGTAAAAGA
TCAACTTTATTAAGTTGGCTGCAATCCTTCATCAAGCAATTCTTTGGATCTGTCACAAAA
TTGGACTATACAACCTTGAGGCTTGGCTTCATTATGACTCATTGCAAGGGGAATCCAAAG
TTCAATTTTCACAAGTATATGACACGCGTGCTTGAAGCTGATTTCAAAAAAGTTGTTGGG
ATTAGCTGGTATCTTTGGGTATTTGTGGTCTTGTTCCTATTGCTTAATGTTCATGGCTGG
CACGCATACTTTTGGATAGCATTCGTTCCCTTTGGTCTTTTGCTAGCTGTGGGGACTAAA
CTAGAGCATGTAATAACCCAACTTGCTGGAGAGGTTGCTGCAAAGCACATCGCGGTAGAA
GGAGATTTAGTTGTGAAGCCATCAGATGATCATTTCTGGTTTCATAGACCGCGACTAGTC
CTTTTCCTCATTCATATCATCCTTTTCCAGAACTCCTTTGAGATTGCATTTTTCTTCTGG
ATTTGGGCTCAATATCGTTTCAACTCCTGCATCATGGGACAAGTTGGTTATATCATCCCT
CGACTTGTCATAGGGGTGTTTGTTCAATTCCTTTGCAGTTATAGTACTCTACCACTATAT
GCAATTGTCACACAGATGGGAAGTTCCTTCAAGAAAGAAATATTCGACGAGTATATACAA
GACGGGCTTGTTGTTTGGGCTAAGAAGGCTAGAAGGAGAGCTGTCAATGGCTCCAACCAA
GTAGGACATAAAGAGTCCACTTCTCCTATGGCTGTGCAGCTAGCACAAGTAGAAACACAA
GTATCTGCTATGGAAGAGGGCAATGGGGGGGAAATTAGGCACGCGACCGACCAACTCAAC
TCCAAAGTAAATTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024259
PEP Infomation

pacid=37469868 transcript=PGSC0003DMT400035671 locus=PGSC0003DMG400013720 ID=PGSC0003DMT400035671.v4.03 annot-version=v4.03
Sequence

MAGGGGDQETNLEFTPTWIVALVCTVIVAISLLVERIIHYGGKYLLKKNQKPLYEALQKI
KEELMLLGFISLLLTVLQERILKICIPKHLTNQWLPCKKDGDVNETVHFQTNFFSLVPGG
RRLLAESANSGYCEAKDKAPLLSLTALHHLHTFIFVLAVSHVTFSALTILFGGIKIRQWK
SWEDSIQKEEYNPEEVLRSKVTHVHDHDFIKGRFLGFGKRSTLLSWLQSFIKQFFGSVTK
LDYTTLRLGFIMTHCKGNPKFNFHKYMTRVLEADFKKVVGISWYLWVFVVLFLLLNVHGW
HAYFWIAFVPFGLLLAVGTKLEHVITQLAGEVAAKHIAVEGDLVVKPSDDHFWFHRPRLV
LFLIHIILFQNSFEIAFFFWIWAQYRFNSCIMGQVGYIIPRLVIGVFVQFLCSYSTLPLY
AIVTQMGSSFKKEIFDEYIQDGLVVWAKKARRRAVNGSNQVGHKESTSPMAVQLAQVETQ
VSAMEEGNGGEIRHATDQLNSKVN*

Transcript Sequence

Transcript ID

PGSC0003DMT400035671
Transcript Infomation

pacid=37469868 locus=PGSC0003DMG400013720 ID=PGSC0003DMT400035671.v4.03 annot-version=v4.03
Sequence

ATGGCAGGAGGTGGAGGAGATCAAGAAACAAATTTAGAATTTACACCAACATGGATTGTT
GCCTTAGTCTGCACTGTCATAGTTGCTATATCTCTTCTTGTTGAAAGAATTATTCACTAT
GGTGGCAAGTATTTGCTCAAGAAAAACCAGAAGCCACTCTATGAAGCCTTACAAAAGATC
AAAGAAGAGTTGATGTTGTTGGGATTCATATCACTGTTATTGACAGTGTTGCAAGAGAGA
ATTCTTAAAATATGCATCCCAAAACACTTGACTAATCAATGGCTCCCTTGTAAAAAGGAT
GGTGATGTCAATGAAACTGTCCACTTTCAGACTAATTTCTTCTCTTTAGTTCCGGGAGGA
AGGCGCCTTCTTGCTGAATCTGCTAATTCTGGTTATTGTGAAGCTAAGGACAAGGCACCA
TTGTTATCTCTCACAGCATTGCATCATCTCCATACCTTTATCTTTGTGCTGGCTGTTTCA
CATGTTACTTTCTCAGCTCTTACAATTCTATTTGGAGGTATAAAGATACGTCAGTGGAAA
TCTTGGGAGGATTCTATCCAGAAAGAGGAATATAATCCAGAAGAAGTACTTCGATCGAAA
GTAACACATGTTCATGATCATGATTTTATCAAGGGCCGGTTTCTAGGATTTGGTAAAAGA
TCAACTTTATTAAGTTGGCTGCAATCCTTCATCAAGCAATTCTTTGGATCTGTCACAAAA
TTGGACTATACAACCTTGAGGCTTGGCTTCATTATGACTCATTGCAAGGGGAATCCAAAG
TTCAATTTTCACAAGTATATGACACGCGTGCTTGAAGCTGATTTCAAAAAAGTTGTTGGG
ATTAGCTGGTATCTTTGGGTATTTGTGGTCTTGTTCCTATTGCTTAATGTTCATGGCTGG
CACGCATACTTTTGGATAGCATTCGTTCCCTTTGGTCTTTTGCTAGCTGTGGGGACTAAA
CTAGAGCATGTAATAACCCAACTTGCTGGAGAGGTTGCTGCAAAGCACATCGCGGTAGAA
GGAGATTTAGTTGTGAAGCCATCAGATGATCATTTCTGGTTTCATAGACCGCGACTAGTC
CTTTTCCTCATTCATATCATCCTTTTCCAGAACTCCTTTGAGATTGCATTTTTCTTCTGG
ATTTGGGCTCAATATCGTTTCAACTCCTGCATCATGGGACAAGTTGGTTATATCATCCCT
CGACTTGTCATAGGGGTGTTTGTTCAATTCCTTTGCAGTTATAGTACTCTACCACTATAT
GCAATTGTCACACAGATGGGAAGTTCCTTCAAGAAAGAAATATTCGACGAGTATATACAA
GACGGGCTTGTTGTTTGGGCTAAGAAGGCTAGAAGGAGAGCTGTCAATGGCTCCAACCAA
GTAGGACATAAAGAGTCCACTTCTCCTATGGCTGTGCAGCTAGCACAAGTAGAAACACAA
GTATCTGCTATGGAAGAGGGCAATGGGGGGGAAATTAGGCACGCGACCGACCAACTCAAC
TCCAAAGTAAATTAA