Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035650
CDS Infomation

pacid=37469739 polypeptide=PGSC0003DMP400024245 locus=PGSC0003DMG400013715 ID=PGSC0003DMT400035650.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTTCGGAAAATCCAGAGATTGTCGAAAGGGTTTTCAAGGACAAGGACAAGGAG
GAGAACGATGACAAGAAAGATGAGCAAAAGGGTGGTTTTATTGAAAAAGTTAAGGACTTC
ATCCATGATATTGGTGAGAAAATTGAGGGAACAATAGGTTTTGGAAAACCAACTGCAGAT
GTCTCTGAAATTCATATTCCTCATATCAATCTTGAAAAGGCTGAAATAGTTGTTGATGTG
CTTGTGAAGAACCCGAACCCCATCCCAATTCCTCTCATTGACATAAACTACTTAATTGAG
AGTGATGGAAGGAAACTGCTTTCTGGATTGATCCCTGATGCTGGAACGATCCATGCACAT
GGTTCAGAGACCGTCAAAATACCACTTAATCTGGTTTATGATGACATCAAAACTACATAC
CACGATATAAAGCCGGGAAGCATCATTCCATATAAGATCAAGGTTGATCTCATAGTTGAT
GTGCCTGTTTTTGGTAGGATAACTATTCCTCTCGAGAAAACTGGAGAGATTCCTATACCT
TACAAGCCAGACATTGATGTTGAGAAAATTCATTTCCAGAGGTTCTCTTTTGAGGAAACT
GTAGCAGTTCTTAAGTTAAAGCTGGAAAACAAGAACGACTTTGATCTGGGGCTCAATAGC
CTTGATTATGATCTTTGGCTCTCCGATGTGAATGTTGGTGGTGCAGAGCTTGAGAAATCA
GCTACACTTGTAAAAAATGGAATCACCCATATCGATCTTCCAATAACCTTCAGGCCCAAG
GACTTTGGCTCTGCTCTTTGGGACATGATCAGAGGGAGAGGTACTGGCTATTCCATGAAA
GGTAACATAAATGTGGACACACCCTTTGGACCAATGAAGTTGCCCATTAGCAAGGAGGGG
GGTACAACCAGTCTCAAGAAGAACAAAGAAGATGGGGGAGACGATGATGAAGATGAGGAT
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400024245
PEP Infomation

pacid=37469739 transcript=PGSC0003DMT400035650 locus=PGSC0003DMG400013715 ID=PGSC0003DMT400035650.v4.03 annot-version=v4.03
Sequence

MASSENPEIVERVFKDKDKEENDDKKDEQKGGFIEKVKDFIHDIGEKIEGTIGFGKPTAD
VSEIHIPHINLEKAEIVVDVLVKNPNPIPIPLIDINYLIESDGRKLLSGLIPDAGTIHAH
GSETVKIPLNLVYDDIKTTYHDIKPGSIIPYKIKVDLIVDVPVFGRITIPLEKTGEIPIP
YKPDIDVEKIHFQRFSFEETVAVLKLKLENKNDFDLGLNSLDYDLWLSDVNVGGAELEKS
ATLVKNGITHIDLPITFRPKDFGSALWDMIRGRGTGYSMKGNINVDTPFGPMKLPISKEG
GTTSLKKNKEDGGDDDEDED*

Transcript Sequence

Transcript ID

PGSC0003DMT400035650
Transcript Infomation

pacid=37469739 locus=PGSC0003DMG400013715 ID=PGSC0003DMT400035650.v4.03 annot-version=v4.03
Sequence

ATGGCGTCTTCGGAAAATCCAGAGATTGTCGAAAGGGTTTTCAAGGACAAGGACAAGGAG
GAGAACGATGACAAGAAAGATGAGCAAAAGGGTGGTTTTATTGAAAAAGTTAAGGACTTC
ATCCATGATATTGGTGAGAAAATTGAGGGAACAATAGGTTTTGGAAAACCAACTGCAGAT
GTCTCTGAAATTCATATTCCTCATATCAATCTTGAAAAGGCTGAAATAGTTGTTGATGTG
CTTGTGAAGAACCCGAACCCCATCCCAATTCCTCTCATTGACATAAACTACTTAATTGAG
AGTGATGGAAGGAAACTGCTTTCTGGATTGATCCCTGATGCTGGAACGATCCATGCACAT
GGTTCAGAGACCGTCAAAATACCACTTAATCTGGTTTATGATGACATCAAAACTACATAC
CACGATATAAAGCCGGGAAGCATCATTCCATATAAGATCAAGGTTGATCTCATAGTTGAT
GTGCCTGTTTTTGGTAGGATAACTATTCCTCTCGAGAAAACTGGAGAGATTCCTATACCT
TACAAGCCAGACATTGATGTTGAGAAAATTCATTTCCAGAGGTTCTCTTTTGAGGAAACT
GTAGCAGTTCTTAAGTTAAAGCTGGAAAACAAGAACGACTTTGATCTGGGGCTCAATAGC
CTTGATTATGATCTTTGGCTCTCCGATGTGAATGTTGGTGGTGCAGAGCTTGAGAAATCA
GCTACACTTGTAAAAAATGGAATCACCCATATCGATCTTCCAATAACCTTCAGGCCCAAG
GACTTTGGCTCTGCTCTTTGGGACATGATCAGAGGGAGAGGTACTGGCTATTCCATGAAA
GGTAACATAAATGTGGACACACCCTTTGGACCAATGAAGTTGCCCATTAGCAAGGAGGGG
GGTACAACCAGTCTCAAGAAGAACAAAGAAGATGGGGGAGACGATGATGAAGATGAGGAT
TGA