Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035614
CDS Infomation

pacid=37442939 polypeptide=PGSC0003DMP400024220 locus=PGSC0003DMG400013698 ID=PGSC0003DMT400035614.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTTCTCCGGCTGCCGTGAAACGGAAGGAACCGGAGGCGAACCCCGGCGAGAAG
GAAGTCCCGGAGCTAAATTCATCTTCCAAGAGAGCAAATTTAACTAGAACCTGCGTGCAC
GAGGTAGCAGTTCCATCTAGTTACACTTCTACAAATGACGAATCAGTTCACGGAACTCTT
TCAAATCCTTGTTACAATGGTGAAATGGCGAAAATCTACCCATTCAAGCTTGACCCATTT
CAGGAAGTGTCAGTTGCATGCTTGGAACGAAATGAATCAATCCTTGTATCAGCACATACC
TCCGCTGGGAAAACTGCTGTTGCTGAGTACGCAATTGCAATGTCGTTTAGGGATAAACAA
AGGGTTATTTATACTTCGCCTTTGAAAGCTTTGAGTAATCAGAAGTACAGAGAGTTAAGT
CATGAGTTTTCTGATGTTGGTTTGATGACTGGTGATGTAACGCTTTCACCAAATGCGAGT
TGTTTGGTGATGACGACGGAGATTTTAAGGGGTATGTTGTATAGGGGTTCTGAGGTGTTA
AAGGAAGTTGCCTGGGTTATATTTGATGAGATACATTACATGAAGGATCGTGAAAGAGGG
GTTGTTTGGGAAGAGAGTATTATATTCTTGCCACCAGCTATTAAGATGGTTTTTCTTTCA
GCGACTATGTCGAATGCTACTCAGTTTGCTGAATGGATATGCAATATTCATAAACAGCCA
TGTCATGTAGTCTACACTGATTTTCGGCCTACCCCGTTGCAGCATTATATGTTTCCAATG
GGTGGTTCTGGATTGTATCTTGTTATTGATGAAAATGAGCAGTTTAGGGAGGACAATTTT
TTGAAGATGCAGGACAGTTTTGCAAAGAAGAAAGTAGGAGATGGAAGCAACAGTGCAAAT
GCTAGGGTTAGAGGTAGAATTGCTAAAGGTGGCTCTACCTCTGGTGGTGTCTCAGATATC
TGCAAAATTGTCAAGATGATCATGGAACGGAAGTTTCAGCCAGTCATTGTGTTCAGTTTT
AGTAGAAGAGAATGCGAACAACATGCAATGTCTATGCCCAAGCTTGATTTTAATACTGAA
GAGGAGAAGGAAATAGTGAAGGAGGTTTTCCATAATGCAGTGGATTGCTTGAGCGAGGAA
GATAGAAACTTACCAGCTATTGAATTAATGTTGCCCCTACTTCAGCGTGGGATTGCTGTT
CACCACTCTGGCCTGCTTCCTGTTATAAAGGAACTTGTGGAACTTCTCTTCCAAGAAGGA
CTCATCAAGGCTCTTTTTGCAACAGAGACTTTCGCCATGGGGCTAAACATGCCTGCAAAA
ACTGTTGTCTTTACCAGTGTAAAGAAATGGGATGGTGATAGTCATCGTTACATTGGATCT
GGTGAGTATATACAGATGAGTGGAAGAGCAGGACGTCGTGGAAAAGATGACCGTGGTATT
TGTATTATCATGATTGATGAGAAGATGGAGATGGATAGCATCAAGGACATGGTTTTGGGT
AAACCAGCTCCATTAGTCAGCACGTTTAGGCTGAGTTACTATACAATTCTGAATTTATTG
AGTCATGCTCAAGGCCAATTTACTGCCGAGCATGTTATCAAACACTCATTCCACCAGTTT
CAGCATGAGAAGGCGTTACCTGACATTGGAAAGAAGGTCTCTAAGCTGGAAGAAGAAGCT
GCTAAGCTTGATGCATCAGGGGAGGGTGAGGTTGCAGAATATCATAAACTAAAGCTTGAG
ATAGCACAACGTGAAAAAAAACTGATGGCTGAAATAACACGGCCTGAAAGGGTCCTCCAT
TTTCTTCTTCCCGGCAGGCTGGTCAAGGTATGGGAAGGTGGAAAAGATTGGGGTTGGGGT
GTTGTAGTCAATGTGGTAAAAAAGCCTCCAGCTGCATCGGGTTCTATGCCTGCTGCACTC
TCTGCTTCACGTAGCACGGGCTATATTGTGGATACCCTACTTCATTGCTCTCTTGGTTCT
GGTGAAAATGGTTCTCAACCCAAACCATGTCCTCCTCGTCCAGGGGAGAAGGGAGAAATG
CATGTAGTTCCTGTTCAATTGCCCCTGATTTCTTCCCTCAGTAAGCTTAGAATATCTGTT
CCTGCGGATCTTCGGCCATTGGAGGCAAGGCAAAGCATCCTTCTTGCTGTTCAGGAGCTT
CAGAAACGTTTTCCTCAAGGCCTCCCGAAGCTTAACCCTGTAAAGGACATGGGATTTGAA
GATCCTGAATTTGTTGATATAGTGAACCAGATTGAAGAACTGGAGAAAAAATTGTTTGCT
CATCCACTACACAAGTCACAAGATGAACATCAACTTAAGAGTTTCCAAAAGAAGGCGGAA
GTGAACCATGAAATTCAACAGCTCAAGTCAAAAATGCGGGATTCACAGCTTCAAAAATTT
CGTGATGAACTTAAAAATCGTTCCCAAGTCTTGAAGAAGCTGGGTCACATAGATGCTGAT
GGTGTTGTGCTGTTGAAGGGACGAGCAGCCTGCTTGATAGACACCGGGGATGAACTCCTC
GTGACTGAATTGATGTTGAATGGTACATTCAATGATCTTGATCATCATCAAACTGCGGCT
CTGGCAAGTTGCTTTATCCCAGGAGACAAAACAAATGAACAAATACATTTAAGAGCTGAG
CTAACTAAACCATTACAACAGCTACAAGATACTGCAAGAAGAATAGCAGAGATTCAACGT
GAATGCAAGTTGGAGATAAACATTGAAGAGTATGTAGAGGCATCAGTACGGCCATTCTTG
ATGGATGTCATTTACTGTTGGTCGAAGGGAGCATCTTTCGCGGAGGTTATACAAATGACT
GATATCTTTGAAGGTAGCATCATTCGGCTAGTAAGAAGGCTTGATGAATTTTTGAACCAG
TTAAAAGGTGCTGCACATGCTGCGGGAGAAGTGGATTTGGAGAACAAATTTGCTGCTGCC
AGTGAGAGCCTTCGACGAGGGATAATGTTTGCAAATTCTCTGTACCTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400024220
PEP Infomation

pacid=37442939 transcript=PGSC0003DMT400035614 locus=PGSC0003DMG400013698 ID=PGSC0003DMT400035614.v4.03 annot-version=v4.03
Sequence

MESSPAAVKRKEPEANPGEKEVPELNSSSKRANLTRTCVHEVAVPSSYTSTNDESVHGTL
SNPCYNGEMAKIYPFKLDPFQEVSVACLERNESILVSAHTSAGKTAVAEYAIAMSFRDKQ
RVIYTSPLKALSNQKYRELSHEFSDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVL
KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICNIHKQP
CHVVYTDFRPTPLQHYMFPMGGSGLYLVIDENEQFREDNFLKMQDSFAKKKVGDGSNSAN
ARVRGRIAKGGSTSGGVSDICKIVKMIMERKFQPVIVFSFSRRECEQHAMSMPKLDFNTE
EEKEIVKEVFHNAVDCLSEEDRNLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEG
LIKALFATETFAMGLNMPAKTVVFTSVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI
CIIMIDEKMEMDSIKDMVLGKPAPLVSTFRLSYYTILNLLSHAQGQFTAEHVIKHSFHQF
QHEKALPDIGKKVSKLEEEAAKLDASGEGEVAEYHKLKLEIAQREKKLMAEITRPERVLH
FLLPGRLVKVWEGGKDWGWGVVVNVVKKPPAASGSMPAALSASRSTGYIVDTLLHCSLGS
GENGSQPKPCPPRPGEKGEMHVVPVQLPLISSLSKLRISVPADLRPLEARQSILLAVQEL
QKRFPQGLPKLNPVKDMGFEDPEFVDIVNQIEELEKKLFAHPLHKSQDEHQLKSFQKKAE
VNHEIQQLKSKMRDSQLQKFRDELKNRSQVLKKLGHIDADGVVLLKGRAACLIDTGDELL
VTELMLNGTFNDLDHHQTAALASCFIPGDKTNEQIHLRAELTKPLQQLQDTARRIAEIQR
ECKLEINIEEYVEASVRPFLMDVIYCWSKGASFAEVIQMTDIFEGSIIRLVRRLDEFLNQ
LKGAAHAAGEVDLENKFAAASESLRRGIMFANSLYL*

Transcript Sequence

Transcript ID

PGSC0003DMT400035614
Transcript Infomation

pacid=37442939 locus=PGSC0003DMG400013698 ID=PGSC0003DMT400035614.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTTCTCCGGCTGCCGTGAAACGGAAGGAACCGGAGGCGAACCCCGGCGAGAAG
GAAGTCCCGGAGCTAAATTCATCTTCCAAGAGAGCAAATTTAACTAGAACCTGCGTGCAC
GAGGTAGCAGTTCCATCTAGTTACACTTCTACAAATGACGAATCAGTTCACGGAACTCTT
TCAAATCCTTGTTACAATGGTGAAATGGCGAAAATCTACCCATTCAAGCTTGACCCATTT
CAGGAAGTGTCAGTTGCATGCTTGGAACGAAATGAATCAATCCTTGTATCAGCACATACC
TCCGCTGGGAAAACTGCTGTTGCTGAGTACGCAATTGCAATGTCGTTTAGGGATAAACAA
AGGGTTATTTATACTTCGCCTTTGAAAGCTTTGAGTAATCAGAAGTACAGAGAGTTAAGT
CATGAGTTTTCTGATGTTGGTTTGATGACTGGTGATGTAACGCTTTCACCAAATGCGAGT
TGTTTGGTGATGACGACGGAGATTTTAAGGGGTATGTTGTATAGGGGTTCTGAGGTGTTA
AAGGAAGTTGCCTGGGTTATATTTGATGAGATACATTACATGAAGGATCGTGAAAGAGGG
GTTGTTTGGGAAGAGAGTATTATATTCTTGCCACCAGCTATTAAGATGGTTTTTCTTTCA
GCGACTATGTCGAATGCTACTCAGTTTGCTGAATGGATATGCAATATTCATAAACAGCCA
TGTCATGTAGTCTACACTGATTTTCGGCCTACCCCGTTGCAGCATTATATGTTTCCAATG
GGTGGTTCTGGATTGTATCTTGTTATTGATGAAAATGAGCAGTTTAGGGAGGACAATTTT
TTGAAGATGCAGGACAGTTTTGCAAAGAAGAAAGTAGGAGATGGAAGCAACAGTGCAAAT
GCTAGGGTTAGAGGTAGAATTGCTAAAGGTGGCTCTACCTCTGGTGGTGTCTCAGATATC
TGCAAAATTGTCAAGATGATCATGGAACGGAAGTTTCAGCCAGTCATTGTGTTCAGTTTT
AGTAGAAGAGAATGCGAACAACATGCAATGTCTATGCCCAAGCTTGATTTTAATACTGAA
GAGGAGAAGGAAATAGTGAAGGAGGTTTTCCATAATGCAGTGGATTGCTTGAGCGAGGAA
GATAGAAACTTACCAGCTATTGAATTAATGTTGCCCCTACTTCAGCGTGGGATTGCTGTT
CACCACTCTGGCCTGCTTCCTGTTATAAAGGAACTTGTGGAACTTCTCTTCCAAGAAGGA
CTCATCAAGGCTCTTTTTGCAACAGAGACTTTCGCCATGGGGCTAAACATGCCTGCAAAA
ACTGTTGTCTTTACCAGTGTAAAGAAATGGGATGGTGATAGTCATCGTTACATTGGATCT
GGTGAGTATATACAGATGAGTGGAAGAGCAGGACGTCGTGGAAAAGATGACCGTGGTATT
TGTATTATCATGATTGATGAGAAGATGGAGATGGATAGCATCAAGGACATGGTTTTGGGT
AAACCAGCTCCATTAGTCAGCACGTTTAGGCTGAGTTACTATACAATTCTGAATTTATTG
AGTCATGCTCAAGGCCAATTTACTGCCGAGCATGTTATCAAACACTCATTCCACCAGTTT
CAGCATGAGAAGGCGTTACCTGACATTGGAAAGAAGGTCTCTAAGCTGGAAGAAGAAGCT
GCTAAGCTTGATGCATCAGGGGAGGGTGAGGTTGCAGAATATCATAAACTAAAGCTTGAG
ATAGCACAACGTGAAAAAAAACTGATGGCTGAAATAACACGGCCTGAAAGGGTCCTCCAT
TTTCTTCTTCCCGGCAGGCTGGTCAAGGTATGGGAAGGTGGAAAAGATTGGGGTTGGGGT
GTTGTAGTCAATGTGGTAAAAAAGCCTCCAGCTGCATCGGGTTCTATGCCTGCTGCACTC
TCTGCTTCACGTAGCACGGGCTATATTGTGGATACCCTACTTCATTGCTCTCTTGGTTCT
GGTGAAAATGGTTCTCAACCCAAACCATGTCCTCCTCGTCCAGGGGAGAAGGGAGAAATG
CATGTAGTTCCTGTTCAATTGCCCCTGATTTCTTCCCTCAGTAAGCTTAGAATATCTGTT
CCTGCGGATCTTCGGCCATTGGAGGCAAGGCAAAGCATCCTTCTTGCTGTTCAGGAGCTT
CAGAAACGTTTTCCTCAAGGCCTCCCGAAGCTTAACCCTGTAAAGGACATGGGATTTGAA
GATCCTGAATTTGTTGATATAGTGAACCAGATTGAAGAACTGGAGAAAAAATTGTTTGCT
CATCCACTACACAAGTCACAAGATGAACATCAACTTAAGAGTTTCCAAAAGAAGGCGGAA
GTGAACCATGAAATTCAACAGCTCAAGTCAAAAATGCGGGATTCACAGCTTCAAAAATTT
CGTGATGAACTTAAAAATCGTTCCCAAGTCTTGAAGAAGCTGGGTCACATAGATGCTGAT
GGTGTTGTGCTGTTGAAGGGACGAGCAGCCTGCTTGATAGACACCGGGGATGAACTCCTC
GTGACTGAATTGATGTTGAATGGTACATTCAATGATCTTGATCATCATCAAACTGCGGCT
CTGGCAAGTTGCTTTATCCCAGGAGACAAAACAAATGAACAAATACATTTAAGAGCTGAG
CTAACTAAACCATTACAACAGCTACAAGATACTGCAAGAAGAATAGCAGAGATTCAACGT
GAATGCAAGTTGGAGATAAACATTGAAGAGTATGTAGAGGCATCAGTACGGCCATTCTTG
ATGGATGTCATTTACTGTTGGTCGAAGGGAGCATCTTTCGCGGAGGTTATACAAATGACT
GATATCTTTGAAGGTAGCATCATTCGGCTAGTAAGAAGGCTTGATGAATTTTTGAACCAG
TTAAAAGGTGCTGCACATGCTGCGGGAGAAGTGGATTTGGAGAACAAATTTGCTGCTGCC
AGTGAGAGCCTTCGACGAGGGATAATGTTTGCAAATTCTCTGTACCTCTAG