Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035592
CDS Infomation

pacid=37442294 polypeptide=PGSC0003DMP400024204 locus=PGSC0003DMG400013686 ID=PGSC0003DMT400035592.v4.03 annot-version=v4.03
Sequence

ATGAAGACGCCGGGAAACGGTGCTGGTGGTGGCAATGTTAATCCAGCTGAAGGAGAGAAG
AAGAGCATAAATCCAGAGCTATGGCAAGCTTGTGCCGGACCTCTGGTTAACTTGCCTGTT
GCTGGAACGCATGTTGTCTACTTCCCTCAAGGCCACAGTGAGCAGGTTGCTGCATCTATC
AAGAAGGATGTGGAAGCCCAAATTCCAAACTATCCAAACCTTCCGTCAAAGTTGATTTGT
CTTCTGCACAATGTTACCCTTCATGCTGATCCTGAAACAGATGAAGTGTATGCTCAAATG
ACTCTACAACCAGTTCCTTCATTTGACAAGGAGGCCTTATTGAGGTCAGATTTGTCTATG
AAAGCAAATAAACCACAACCAGAATTTTTTTGCAAAACCTTGACGGCAAGTGATACAAGC
ACTCATGGTGGTTTCTCTGTACCTCGGCGTGCAGCTGAGAAAATATTCCCTCCTCTGGAT
TACTCTCTGCAACCACCTGCTCAAGAACTTGTGGCTAGGGACTTGCATGATAACATATGG
ACTTTTCGACATGTTTATCGAGGGCAACCCAAAAGACACTTACTAACAACAGGGTGGAGC
CTAGTCGTGAGTGGAAAAAGGCTGTTTGCAGGTGACTCGGTCTTGTTTATTAGGGATGAT
AAACACCAGTTTCTACTAGGAATTAGAAAGGCAAACAGGCAGCCTACCAACTTATCGTCA
TCAGTGTTGTCAAGTGATAGTATGCATATTGGTATCCTAGCAGCAGCAGCACATGCAGCT
GCAAACAACAGTCCTTTCACTGTGTTCTATAATCCAAGGGCTGGTCCTTCTGAATTTGTA
ATTCCTTTAGCAAAGTACTACAAAGCAACTTATAGCAGTCAAATATCTCTTGGCATGAGG
TTTCGCATGATGTTTGAGACAGAAGAATCGGGAACTAGAAGGTATATGGGCACAATTACT
GGCATTAGTGATCTGGATCCAGTGAGGTGGAAGAACTCTCAGTGGCGGAATTTGCAGGTT
GGTTGGGATGAGTCGACTGCTGGAGAGAGGATCAACCGAGTCTCTATTTGGGAGATTGAA
CCAATAACAGCACCATTTTTGATCTGTTCAAGTCCATTCTTCAGCTCCAAGCGTCCAAGG
CAACCCGGAATGCCAGATGGTGATTATTCTGATATGGACGGCATGTTCAAGAGGACAATG
CCATGGCTTGGTGATGATTTTGGCATGACGGATCCTCAAGGTCTGCCTGGTCTTAGCTTA
ATCCAATGGATGAACATGCAGAAGAATCCTTCTCTGGCTAACCCGATGATCCCCAACTAT
ATGAATTCCCTATCTGGTTCTGCCCTACAAAACCTTGCTGGAGCAGACCTATCACGCCAG
CTAGGTATGGCAGCACCTCAATTTCAGCAGCAGCAAATGCAGCACAACTTGCAGTTCAAT
AATGCCCATAGGCCAAACCAACAGCTTGACCAGCTCCAGAAGTTACCAGCAGCAACACTG
AACCCATTAGACTCCATTATGCAATCGCAGCAACAGTTATCTGATGTCAGTCAGCAACCA
AGACAAAATCTAACTAATCAGTCACTGCCTACAACCCAAGTTCACACACAACATATGCAA
GCGCAGAGTCTTGTGCAATCTCAGAATGTTCTTCCGCCGCAACAATCAGTTCAAAATCAA
AACCAGCTGCAGAGAAACCTCCCCCAGAGCCTACCACAGCAACATCCACAACAACAGATT
CTGAGTCAGACTCAGCAGCAAAGTTTCATGCCATCCCAGCCCCCAGATCCAGTTAACCAA
CAACAGCATTTCTCTGATAACCAAGCACAGCTTCAAATGCTACAGAAACTGCATCAACAA
CAAAAATCACTTCTAGCACAACAATCTGGATTACAGCAACCTTCACAACTTGGGCCAATC
CAGGATCACCAGAAGCAGCTCATGGATGCATCACAGAACTTTTCCAGGTCACTTGCGACA
AACCAAATGTTGGATGCGTCTCAAACCATGTCCACTTCACTTCCTCACTCGCAAGTTGTT
CAGCAGCAACAAATGACGAGAATAAATAGCCCGTCCAATCTTCGGTTTTCCCAGTCAACT
CAGCAACCAAAGCTTCAGCAGCAGCAATCTGGAAACCTGTCAGACCTATCTGGACCAGTT
AACTACTCTCTACCCCGAACGTCTTATCAGCTTTCCACAAACGGCAGTAATTTAACAGGA
ACTGCGGGGGGAGGGCAGTCTCTGGTAATTGATGATGTCCCATCATGGTCCACCTCGGTT
TCCACTAACAACTGTCACAGTGTGGTTCAGCCAAATATGAATGGTCGAATTACAGGTGCA
CGGGATGAAATGACCCACTGTTCTGGACCCTTCGAAGTTATGTCTGCTAATAACAACCTG
CAGCCAAAGTCTGATGTTAAACCTTCAGTAAACGTCGTCTCCAAGAGCCAGAACCATGGG
TTTTTGGCACCTCAAACTCTTAATACTTCAGGAATACAGTTTGATTATTTGGATAGTTCA
TCTTCAGCAACTTCAGCTTGCCTTTCCCAAAATGATGTTCAATTGCAGCAGACTGCTACA
GACCCATTATCTTGCAGTTCTCAGCCATTGATATTCAGAGATAGTCCAGATGGAGGAGAA
GTTCAGGGTGACCCGAGAAACAATGTAGCTTTTGGAGCAACAAACATGAACAATAATCAG
TTAGGACTGCCTATGATACCTGATCCTTTGATCACTAAAAGCTCAATGGGATCAAGGAAG
GATTTCTCAGACAATCTCTCATCAGGAGGCGGCATGCTCTCCAGCTATGAGAATCCCAAG
GAAGCACAGCCTGAACTCTTGGCCTCAATGGCTTCTGAGTATGTCACCTTTAATTCAATT
GATTCTACTATCAATGATGGTAGCTTCATGGATAGAGGCGCCTGGGAGCCACCACCTCAA
CTGCCTCGTTTGCGGACATATACCAAGGTGTACAAGCGTGGTGCGGTAGGAAGATCAATT
GATATCGCACGGTACTCAGGCTATGAGGAACTTAAACTAGATTTGGCTCGTAGATTTGGT
ATAGAGGGACAACTGGAGGACAGACAAAGAATAGGATGGAAGCTTGTGTATGTTGATCAC
GAAAAGGATGTTCTCCTGGTTGGTGATGACCCCTGGGAGGAATTCGTGAGCTGTGTCCAC
TGCATCAAAATTCTTTCTCCACAAGAAGTTCAACAAATGAGCTTGGATGGAGATTTTGGG
GGTAGTGTCCTTCAAAACCAAGATTGTAGCAGTTCAGACGCGGGAGATGTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024204
PEP Infomation

pacid=37442294 transcript=PGSC0003DMT400035592 locus=PGSC0003DMG400013686 ID=PGSC0003DMT400035592.v4.03 annot-version=v4.03
Sequence

MKTPGNGAGGGNVNPAEGEKKSINPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASI
KKDVEAQIPNYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQPVPSFDKEALLRSDLSM
KANKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIW
TFRHVYRGQPKRHLLTTGWSLVVSGKRLFAGDSVLFIRDDKHQFLLGIRKANRQPTNLSS
SVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMR
FRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIE
PITAPFLICSSPFFSSKRPRQPGMPDGDYSDMDGMFKRTMPWLGDDFGMTDPQGLPGLSL
IQWMNMQKNPSLANPMIPNYMNSLSGSALQNLAGADLSRQLGMAAPQFQQQQMQHNLQFN
NAHRPNQQLDQLQKLPAATLNPLDSIMQSQQQLSDVSQQPRQNLTNQSLPTTQVHTQHMQ
AQSLVQSQNVLPPQQSVQNQNQLQRNLPQSLPQQHPQQQILSQTQQQSFMPSQPPDPVNQ
QQHFSDNQAQLQMLQKLHQQQKSLLAQQSGLQQPSQLGPIQDHQKQLMDASQNFSRSLAT
NQMLDASQTMSTSLPHSQVVQQQQMTRINSPSNLRFSQSTQQPKLQQQQSGNLSDLSGPV
NYSLPRTSYQLSTNGSNLTGTAGGGQSLVIDDVPSWSTSVSTNNCHSVVQPNMNGRITGA
RDEMTHCSGPFEVMSANNNLQPKSDVKPSVNVVSKSQNHGFLAPQTLNTSGIQFDYLDSS
SSATSACLSQNDVQLQQTATDPLSCSSQPLIFRDSPDGGEVQGDPRNNVAFGATNMNNNQ
LGLPMIPDPLITKSSMGSRKDFSDNLSSGGGMLSSYENPKEAQPELLASMASEYVTFNSI
DSTINDGSFMDRGAWEPPPQLPRLRTYTKVYKRGAVGRSIDIARYSGYEELKLDLARRFG
IEGQLEDRQRIGWKLVYVDHEKDVLLVGDDPWEEFVSCVHCIKILSPQEVQQMSLDGDFG
GSVLQNQDCSSSDAGDV*

Transcript Sequence

Transcript ID

PGSC0003DMT400035592
Transcript Infomation

pacid=37442294 locus=PGSC0003DMG400013686 ID=PGSC0003DMT400035592.v4.03 annot-version=v4.03
Sequence

ATGAAGACGCCGGGAAACGGTGCTGGTGGTGGCAATGTTAATCCAGCTGAAGGAGAGAAG
AAGAGCATAAATCCAGAGCTATGGCAAGCTTGTGCCGGACCTCTGGTTAACTTGCCTGTT
GCTGGAACGCATGTTGTCTACTTCCCTCAAGGCCACAGTGAGCAGGTTGCTGCATCTATC
AAGAAGGATGTGGAAGCCCAAATTCCAAACTATCCAAACCTTCCGTCAAAGTTGATTTGT
CTTCTGCACAATGTTACCCTTCATGCTGATCCTGAAACAGATGAAGTGTATGCTCAAATG
ACTCTACAACCAGTTCCTTCATTTGACAAGGAGGCCTTATTGAGGTCAGATTTGTCTATG
AAAGCAAATAAACCACAACCAGAATTTTTTTGCAAAACCTTGACGGCAAGTGATACAAGC
ACTCATGGTGGTTTCTCTGTACCTCGGCGTGCAGCTGAGAAAATATTCCCTCCTCTGGAT
TACTCTCTGCAACCACCTGCTCAAGAACTTGTGGCTAGGGACTTGCATGATAACATATGG
ACTTTTCGACATGTTTATCGAGGGCAACCCAAAAGACACTTACTAACAACAGGGTGGAGC
CTAGTCGTGAGTGGAAAAAGGCTGTTTGCAGGTGACTCGGTCTTGTTTATTAGGGATGAT
AAACACCAGTTTCTACTAGGAATTAGAAAGGCAAACAGGCAGCCTACCAACTTATCGTCA
TCAGTGTTGTCAAGTGATAGTATGCATATTGGTATCCTAGCAGCAGCAGCACATGCAGCT
GCAAACAACAGTCCTTTCACTGTGTTCTATAATCCAAGGGCTGGTCCTTCTGAATTTGTA
ATTCCTTTAGCAAAGTACTACAAAGCAACTTATAGCAGTCAAATATCTCTTGGCATGAGG
TTTCGCATGATGTTTGAGACAGAAGAATCGGGAACTAGAAGGTATATGGGCACAATTACT
GGCATTAGTGATCTGGATCCAGTGAGGTGGAAGAACTCTCAGTGGCGGAATTTGCAGGTT
GGTTGGGATGAGTCGACTGCTGGAGAGAGGATCAACCGAGTCTCTATTTGGGAGATTGAA
CCAATAACAGCACCATTTTTGATCTGTTCAAGTCCATTCTTCAGCTCCAAGCGTCCAAGG
CAACCCGGAATGCCAGATGGTGATTATTCTGATATGGACGGCATGTTCAAGAGGACAATG
CCATGGCTTGGTGATGATTTTGGCATGACGGATCCTCAAGGTCTGCCTGGTCTTAGCTTA
ATCCAATGGATGAACATGCAGAAGAATCCTTCTCTGGCTAACCCGATGATCCCCAACTAT
ATGAATTCCCTATCTGGTTCTGCCCTACAAAACCTTGCTGGAGCAGACCTATCACGCCAG
CTAGGTATGGCAGCACCTCAATTTCAGCAGCAGCAAATGCAGCACAACTTGCAGTTCAAT
AATGCCCATAGGCCAAACCAACAGCTTGACCAGCTCCAGAAGTTACCAGCAGCAACACTG
AACCCATTAGACTCCATTATGCAATCGCAGCAACAGTTATCTGATGTCAGTCAGCAACCA
AGACAAAATCTAACTAATCAGTCACTGCCTACAACCCAAGTTCACACACAACATATGCAA
GCGCAGAGTCTTGTGCAATCTCAGAATGTTCTTCCGCCGCAACAATCAGTTCAAAATCAA
AACCAGCTGCAGAGAAACCTCCCCCAGAGCCTACCACAGCAACATCCACAACAACAGATT
CTGAGTCAGACTCAGCAGCAAAGTTTCATGCCATCCCAGCCCCCAGATCCAGTTAACCAA
CAACAGCATTTCTCTGATAACCAAGCACAGCTTCAAATGCTACAGAAACTGCATCAACAA
CAAAAATCACTTCTAGCACAACAATCTGGATTACAGCAACCTTCACAACTTGGGCCAATC
CAGGATCACCAGAAGCAGCTCATGGATGCATCACAGAACTTTTCCAGGTCACTTGCGACA
AACCAAATGTTGGATGCGTCTCAAACCATGTCCACTTCACTTCCTCACTCGCAAGTTGTT
CAGCAGCAACAAATGACGAGAATAAATAGCCCGTCCAATCTTCGGTTTTCCCAGTCAACT
CAGCAACCAAAGCTTCAGCAGCAGCAATCTGGAAACCTGTCAGACCTATCTGGACCAGTT
AACTACTCTCTACCCCGAACGTCTTATCAGCTTTCCACAAACGGCAGTAATTTAACAGGA
ACTGCGGGGGGAGGGCAGTCTCTGGTAATTGATGATGTCCCATCATGGTCCACCTCGGTT
TCCACTAACAACTGTCACAGTGTGGTTCAGCCAAATATGAATGGTCGAATTACAGGTGCA
CGGGATGAAATGACCCACTGTTCTGGACCCTTCGAAGTTATGTCTGCTAATAACAACCTG
CAGCCAAAGTCTGATGTTAAACCTTCAGTAAACGTCGTCTCCAAGAGCCAGAACCATGGG
TTTTTGGCACCTCAAACTCTTAATACTTCAGGAATACAGTTTGATTATTTGGATAGTTCA
TCTTCAGCAACTTCAGCTTGCCTTTCCCAAAATGATGTTCAATTGCAGCAGACTGCTACA
GACCCATTATCTTGCAGTTCTCAGCCATTGATATTCAGAGATAGTCCAGATGGAGGAGAA
GTTCAGGGTGACCCGAGAAACAATGTAGCTTTTGGAGCAACAAACATGAACAATAATCAG
TTAGGACTGCCTATGATACCTGATCCTTTGATCACTAAAAGCTCAATGGGATCAAGGAAG
GATTTCTCAGACAATCTCTCATCAGGAGGCGGCATGCTCTCCAGCTATGAGAATCCCAAG
GAAGCACAGCCTGAACTCTTGGCCTCAATGGCTTCTGAGTATGTCACCTTTAATTCAATT
GATTCTACTATCAATGATGGTAGCTTCATGGATAGAGGCGCCTGGGAGCCACCACCTCAA
CTGCCTCGTTTGCGGACATATACCAAGGTGTACAAGCGTGGTGCGGTAGGAAGATCAATT
GATATCGCACGGTACTCAGGCTATGAGGAACTTAAACTAGATTTGGCTCGTAGATTTGGT
ATAGAGGGACAACTGGAGGACAGACAAAGAATAGGATGGAAGCTTGTGTATGTTGATCAC
GAAAAGGATGTTCTCCTGGTTGGTGATGACCCCTGGGAGGAATTCGTGAGCTGTGTCCAC
TGCATCAAAATTCTTTCTCCACAAGAAGTTCAACAAATGAGCTTGGATGGAGATTTTGGG
GGTAGTGTCCTTCAAAACCAAGATTGTAGCAGTTCAGACGCGGGAGATGTGTAA