Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035587
CDS Infomation

pacid=37443353 polypeptide=PGSC0003DMP400024201 locus=PGSC0003DMG400013683 ID=PGSC0003DMT400035587.v4.03 annot-version=v4.03
Sequence

ATGGATGTCCCAACCGCGGTGTCCAAAGTCATACCTGGCTTTTGCACAGTTTATGTGATT
GCCAAAGGCAAAGTTCAATCGACAAAGAATGCATCTTCTCCAGTTCCCAGTTCACCAACT
CCCGTGCAGCAGAATCATTCCACCTCCTCTCTAGGTGCTAAGCTTGGCTTCGCTGATACA
CGTTATGCACAAATCAGCAGCGACACAAAAGGTCTGTTTTTCCACCTGCAGCATATTGCG
TTAATTTCTGTCATAAAGCACTTGAACACTATTAGAACAGGTTTAACCTGTCCTATTTCA
ACAGGAAGTGTGACTGATATTAGGTCACCATACGCATCACGAAGCTCAGCTGACGATTTA
GATAGCATCAAGTCTCCATTCAACAGAGGTAAAGGGATAAACAGATCATATGGAGACCTC
TCAGTGGCAGAATCTGATTTATCATTTGTGAGCTCTGGTCGTCCAAGCTCTACATTTCCA
ATCTCTATGGACAGCAGTCACGATTTGGGTCTTCCCCCTCGGCTTTCAAACAGCTCAGAC
ACAGATGTTAAATATTCTGCTCCGCGACTTTCAAACAGCTCAGAAACAGAGAGCAGGTTA
AGCTTTGGATCATCATTCTCAGCAACCAGGTTATCTGAAGCTAATGGCTTCTCATCAAAT
TCTTTTGATAGTGGCAATGGATCATGGTCTTCACCCAGCAACATGGAAGACATAGAAGCA
GAGATGAGAAGACTCAAGCAGGAACTCAAGCAGACCATGGACATGTACAGTTCAGCATGC
AAGGAGGCACTTTCAGCAAAACATAAGGCAATGGAACTTCACCGCTGGAAAGTAGAAGAA
GAACAAAAATTAGAAGAGGCACGACTAGCAGAGGAAGCAGCACTGGCTGTTGCAGAGAAA
GAAAAAGCAAAGTGCAGGGCAGCCCTTGAAGCAGCAGAAGAAGCACAGAGGATCGCCGAA
CGAGAGGCACAGAGAAGAATCAGTGCCGAAAGGAAGGCACTCAAAGAATCTGAAGAGAAG
AAGAAGGTACTGGATGCCCTTGCACAGAGTGATTGCCGGTATCGTAAGTATACAATAGAG
GAGATTGAAACAGCAACAGATAACTTTGCAGCAACTCGTAAAATTGGAGAAGGTGGATAC
GGGCCGGTATACAAGTGTTACTTGGATCACACGCAGGTTGCGATTAAGGTTCTCCGTCCA
GATGCTGCTCAGGGAAGGTCACAATTTCAGCAAGAGGTTGAAGTTCTAAGCTGCATAAGG
CATCCAAACATGGTTCTTCTACTTGGAGCCTGCCCTGAATTTGGCTGCCTAGTGTATGAG
TACATGGCCAATGGGAGCTTAGATGATCGCCTCTTCCGAAGAGGAAGCACTCAAGTACTT
CCTTGGCAACTAAGATTTCGTATAGCTGCAGAGGTCGGAACTAGCCTCCTTTTCCTTCAC
CAGACCAAGCCAGAACCTCTAGTGCACCGGGATCTGAAACCTGGCAACATTTTGCTTGAC
CGCAATTATGTAAGTAAGATCAGCGATGTTGGTTTAGCTAGGCTCGTCCCCCCTTCTATA
GCTGACTCCGTGACACAGTACCGAATGACATCAACAGCGGGAACATTTTGTTATATAGAT
CCTGAATATCAGCAAACTGGGATGTTGGGAACAAAATCTGATATATACTCATTTGGAATA
ATGCTTCTCCAAATAATTACAGCCAGACCTCCAATGGGTTTGACCCACCATGTTGAGAGG
TCAATTGAGAAAGGCACTTTTGCTGATATGCTTGATCCAGCAGTTCCTGACTGGCCTATG
GAAGAGGCTTTGACGTTTGCCAAGTTAGCACTCAAGTGTGCAGAACTCAGGCGTAAAGAT
CGACCAGATCTTGGCACTGTAATTTTGCCTGAACTTAACAGGTTACGTGTACTTGCTGAA
GAAGCAATGCAACCAATGCATTTTGGAAGCAGCCCAAGAAGCCCAACTAGTGAAAGCCGA
TCTACCTCTCAAGTAAGTGATATAAGAACATCTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024201
PEP Infomation

pacid=37443353 transcript=PGSC0003DMT400035587 locus=PGSC0003DMG400013683 ID=PGSC0003DMT400035587.v4.03 annot-version=v4.03
Sequence

MDVPTAVSKVIPGFCTVYVIAKGKVQSTKNASSPVPSSPTPVQQNHSTSSLGAKLGFADT
RYAQISSDTKGLFFHLQHIALISVIKHLNTIRTGLTCPISTGSVTDIRSPYASRSSADDL
DSIKSPFNRGKGINRSYGDLSVAESDLSFVSSGRPSSTFPISMDSSHDLGLPPRLSNSSD
TDVKYSAPRLSNSSETESRLSFGSSFSATRLSEANGFSSNSFDSGNGSWSSPSNMEDIEA
EMRRLKQELKQTMDMYSSACKEALSAKHKAMELHRWKVEEEQKLEEARLAEEAALAVAEK
EKAKCRAALEAAEEAQRIAEREAQRRISAERKALKESEEKKKVLDALAQSDCRYRKYTIE
EIETATDNFAATRKIGEGGYGPVYKCYLDHTQVAIKVLRPDAAQGRSQFQQEVEVLSCIR
HPNMVLLLGACPEFGCLVYEYMANGSLDDRLFRRGSTQVLPWQLRFRIAAEVGTSLLFLH
QTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSIADSVTQYRMTSTAGTFCYID
PEYQQTGMLGTKSDIYSFGIMLLQIITARPPMGLTHHVERSIEKGTFADMLDPAVPDWPM
EEALTFAKLALKCAELRRKDRPDLGTVILPELNRLRVLAEEAMQPMHFGSSPRSPTSESR
STSQVSDIRTSL*

Transcript Sequence

Transcript ID

PGSC0003DMT400035587
Transcript Infomation

pacid=37443353 locus=PGSC0003DMG400013683 ID=PGSC0003DMT400035587.v4.03 annot-version=v4.03
Sequence

ATGGATGTCCCAACCGCGGTGTCCAAAGTCATACCTGGCTTTTGCACAGTTTATGTGATT
GCCAAAGGCAAAGTTCAATCGACAAAGAATGCATCTTCTCCAGTTCCCAGTTCACCAACT
CCCGTGCAGCAGAATCATTCCACCTCCTCTCTAGGTGCTAAGCTTGGCTTCGCTGATACA
CGTTATGCACAAATCAGCAGCGACACAAAAGGTCTGTTTTTCCACCTGCAGCATATTGCG
TTAATTTCTGTCATAAAGCACTTGAACACTATTAGAACAGGTTTAACCTGTCCTATTTCA
ACAGGAAGTGTGACTGATATTAGGTCACCATACGCATCACGAAGCTCAGCTGACGATTTA
GATAGCATCAAGTCTCCATTCAACAGAGGTAAAGGGATAAACAGATCATATGGAGACCTC
TCAGTGGCAGAATCTGATTTATCATTTGTGAGCTCTGGTCGTCCAAGCTCTACATTTCCA
ATCTCTATGGACAGCAGTCACGATTTGGGTCTTCCCCCTCGGCTTTCAAACAGCTCAGAC
ACAGATGTTAAATATTCTGCTCCGCGACTTTCAAACAGCTCAGAAACAGAGAGCAGGTTA
AGCTTTGGATCATCATTCTCAGCAACCAGGTTATCTGAAGCTAATGGCTTCTCATCAAAT
TCTTTTGATAGTGGCAATGGATCATGGTCTTCACCCAGCAACATGGAAGACATAGAAGCA
GAGATGAGAAGACTCAAGCAGGAACTCAAGCAGACCATGGACATGTACAGTTCAGCATGC
AAGGAGGCACTTTCAGCAAAACATAAGGCAATGGAACTTCACCGCTGGAAAGTAGAAGAA
GAACAAAAATTAGAAGAGGCACGACTAGCAGAGGAAGCAGCACTGGCTGTTGCAGAGAAA
GAAAAAGCAAAGTGCAGGGCAGCCCTTGAAGCAGCAGAAGAAGCACAGAGGATCGCCGAA
CGAGAGGCACAGAGAAGAATCAGTGCCGAAAGGAAGGCACTCAAAGAATCTGAAGAGAAG
AAGAAGGTACTGGATGCCCTTGCACAGAGTGATTGCCGGTATCGTAAGTATACAATAGAG
GAGATTGAAACAGCAACAGATAACTTTGCAGCAACTCGTAAAATTGGAGAAGGTGGATAC
GGGCCGGTATACAAGTGTTACTTGGATCACACGCAGGTTGCGATTAAGGTTCTCCGTCCA
GATGCTGCTCAGGGAAGGTCACAATTTCAGCAAGAGGTTGAAGTTCTAAGCTGCATAAGG
CATCCAAACATGGTTCTTCTACTTGGAGCCTGCCCTGAATTTGGCTGCCTAGTGTATGAG
TACATGGCCAATGGGAGCTTAGATGATCGCCTCTTCCGAAGAGGAAGCACTCAAGTACTT
CCTTGGCAACTAAGATTTCGTATAGCTGCAGAGGTCGGAACTAGCCTCCTTTTCCTTCAC
CAGACCAAGCCAGAACCTCTAGTGCACCGGGATCTGAAACCTGGCAACATTTTGCTTGAC
CGCAATTATGTAAGTAAGATCAGCGATGTTGGTTTAGCTAGGCTCGTCCCCCCTTCTATA
GCTGACTCCGTGACACAGTACCGAATGACATCAACAGCGGGAACATTTTGTTATATAGAT
CCTGAATATCAGCAAACTGGGATGTTGGGAACAAAATCTGATATATACTCATTTGGAATA
ATGCTTCTCCAAATAATTACAGCCAGACCTCCAATGGGTTTGACCCACCATGTTGAGAGG
TCAATTGAGAAAGGCACTTTTGCTGATATGCTTGATCCAGCAGTTCCTGACTGGCCTATG
GAAGAGGCTTTGACGTTTGCCAAGTTAGCACTCAAGTGTGCAGAACTCAGGCGTAAAGAT
CGACCAGATCTTGGCACTGTAATTTTGCCTGAACTTAACAGGTTACGTGTACTTGCTGAA
GAAGCAATGCAACCAATGCATTTTGGAAGCAGCCCAAGAAGCCCAACTAGTGAAAGCCGA
TCTACCTCTCAAGTAAGTGATATAAGAACATCTTTGTAA