Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035585
CDS Infomation

pacid=37442017 polypeptide=PGSC0003DMP400024199 locus=PGSC0003DMG400013682 ID=PGSC0003DMT400035585.v4.03 annot-version=v4.03
Sequence

ATGTCGGTGGCTTATCGTTATAGCAACCACAATCGCCAGTATCGTCATCACCATCACCAT
CTCTTAATCCTCGTTGTGTTATTATTACTAGTCGTTGTCCCGATCAAATCAGATAGTTCT
GAGGCAGAAATCCTCTTTCGATTTAGCAAGTCCTTGCAAAAAAATGGCGCAACAGCTAAT
TGGAATACGAAAGTATCGCCTTGCGATAAAAATACAGATAAACCCAATTGGGATAGTGTT
ATTTGCGAAAACGGATTCGTTTTCGGGTTGCAATTGGAGGGTAAAGGCTTAAGTGGGACA
ATAGATGTGGATGCTCTTAAAGATTTGCCTAATTTCAGGACCATAAGTGTTATGAACAAT
AATTTTGAAGGACCTTTACCGAATTTAAGTAAACTTGCGGGGTTAAAAACGGCATATTTC
ACAAATAACAAGTTTTCTGGCCAAATTGACAATACTCTTTTTGAAGGGATGCATTGGTTA
AAAAAACTTCATCTTGCTAATAATCAATTAAGTGGTAAAATCCCATCTGTTTTGGGTCAA
TTGCCTAAGCTTACGGAATTGAGAGTTGAAAACAACAAATTTGAAGGCCAAATACCTGAT
TTTGTTCAAGAGAGACTTATGGATATGAATTTTGCTAACAACTCTCTTGAGGGTCCAATT
CCTCATGGCCTTACTAGTCTCAAACCTTCAGCATTTGAAGGTAATGATCTTTGTGATGGT
CCATTATCGAAATGCACGAGTGAACCAAAAGTAGCCCTCTGGACAATTATATTGGTGGTT
ATCGCAGTTGCAGCAGCAGTAGCAGCAATTGTTGTTGTTATCATCATTCTTCGTCGGGGC
AAGCAGACACCCGAAACAGAAACAAGACCAACGCCTACACCCTCTGGAGCTGCAGGGGGC
GCTACTAACCAAACAGGAGCGCCCTCAGCAGCAGATCTAAACAAAATGGAACAGGGCAGC
AATCAAGCAATGGCTGCTCCTGCTCCTGACCAGTCTCCAGAGGGGACCGGTGGACTAAAT
AATAATAAGAGGCCTGAAGTACAAGCAATACAAAAACTTCTATTCTTAAAAGATGATATT
GAAAAATTTGATTTGCCAGATCTACTAAAGGCTTCAGCTGAAATATTGGGTAGCGGTGTA
TTTGGTTCGACTTATAAAGCTGCACTTAGCATGGGACGTGTTATGGTTGTCAAAAGGTTT
AGGCAAATGAATAATGTAGGCAAGGAAGATTTTCATGAGCATATGAGAAGGCTAGGTAGG
TTGAGTCATAAGAACTTACTTCCTGTTGTAGCTTTTTACTATAGGAAAGAGGAAAAGCTT
TTGGTCTCAGAGTATGTCAACAATGTCAGCCTTGCAGTTCATCTTCATGGTAATAAATCG
CGGGGGCAACCAAGTCTTGATTGGCCAACTCGATTGAAAATTGTAAAGGGAGTAGCCAAA
GGACTATTGTACCTCTACAACGAGCTACCAAGCTTGACAGCACCCCACGGTCACCTCAAG
TCCTCGAACGTACTTCTAAACGAATCCTACGAGCCCCTCCTCACGGACTATGCATTACTA
CCCGTAGTAAACCTAGAACACGCTCAAGAACACATGATTGCTTACAAATCTCCTGAATTC
AAACATAGTGGTCGTATCACACGTAAAAATGATGTGTGGACGCTTGGAATATTAATCCTC
GAGATCATAACGGGCAAATTCCCGTCTAATTTCTTGCAACAAGGCAAGGGGAGTGACACG
GATTTGGCTACGTGGGTAAGGTCCGTGGTAAATGAGGACATGATGGAGGTAGATGTATTC
GAGAAGGAAATGAGAGGTACGACGAATTCAGAGGGGGAAATGATGAAGTTATTGAAGATA
GCTTTGGGTTGTTGTGATCTTGATATGGAAAAGAGGTTTGATATGAAGGAAGCAATGGAG
AGGATTAAGGAAGTAAAAGAGAGAGATGGGGATGATGATTTTTACTCTACAAGAGGATTA
TCTGATGATTATACGCAAGTTTCGATGAACATTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024199
PEP Infomation

pacid=37442017 transcript=PGSC0003DMT400035585 locus=PGSC0003DMG400013682 ID=PGSC0003DMT400035585.v4.03 annot-version=v4.03
Sequence

MSVAYRYSNHNRQYRHHHHHLLILVVLLLLVVVPIKSDSSEAEILFRFSKSLQKNGATAN
WNTKVSPCDKNTDKPNWDSVICENGFVFGLQLEGKGLSGTIDVDALKDLPNFRTISVMNN
NFEGPLPNLSKLAGLKTAYFTNNKFSGQIDNTLFEGMHWLKKLHLANNQLSGKIPSVLGQ
LPKLTELRVENNKFEGQIPDFVQERLMDMNFANNSLEGPIPHGLTSLKPSAFEGNDLCDG
PLSKCTSEPKVALWTIILVVIAVAAAVAAIVVVIIILRRGKQTPETETRPTPTPSGAAGG
ATNQTGAPSAADLNKMEQGSNQAMAAPAPDQSPEGTGGLNNNKRPEVQAIQKLLFLKDDI
EKFDLPDLLKASAEILGSGVFGSTYKAALSMGRVMVVKRFRQMNNVGKEDFHEHMRRLGR
LSHKNLLPVVAFYYRKEEKLLVSEYVNNVSLAVHLHGNKSRGQPSLDWPTRLKIVKGVAK
GLLYLYNELPSLTAPHGHLKSSNVLLNESYEPLLTDYALLPVVNLEHAQEHMIAYKSPEF
KHSGRITRKNDVWTLGILILEIITGKFPSNFLQQGKGSDTDLATWVRSVVNEDMMEVDVF
EKEMRGTTNSEGEMMKLLKIALGCCDLDMEKRFDMKEAMERIKEVKERDGDDDFYSTRGL
SDDYTQVSMNI*

Transcript Sequence

Transcript ID

PGSC0003DMT400035585
Transcript Infomation

pacid=37442017 locus=PGSC0003DMG400013682 ID=PGSC0003DMT400035585.v4.03 annot-version=v4.03
Sequence

ATGTCGGTGGCTTATCGTTATAGCAACCACAATCGCCAGTATCGTCATCACCATCACCAT
CTCTTAATCCTCGTTGTGTTATTATTACTAGTCGTTGTCCCGATCAAATCAGATAGTTCT
GAGGCAGAAATCCTCTTTCGATTTAGCAAGTCCTTGCAAAAAAATGGCGCAACAGCTAAT
TGGAATACGAAAGTATCGCCTTGCGATAAAAATACAGATAAACCCAATTGGGATAGTGTT
ATTTGCGAAAACGGATTCGTTTTCGGGTTGCAATTGGAGGGTAAAGGCTTAAGTGGGACA
ATAGATGTGGATGCTCTTAAAGATTTGCCTAATTTCAGGACCATAAGTGTTATGAACAAT
AATTTTGAAGGACCTTTACCGAATTTAAGTAAACTTGCGGGGTTAAAAACGGCATATTTC
ACAAATAACAAGTTTTCTGGCCAAATTGACAATACTCTTTTTGAAGGGATGCATTGGTTA
AAAAAACTTCATCTTGCTAATAATCAATTAAGTGGTAAAATCCCATCTGTTTTGGGTCAA
TTGCCTAAGCTTACGGAATTGAGAGTTGAAAACAACAAATTTGAAGGCCAAATACCTGAT
TTTGTTCAAGAGAGACTTATGGATATGAATTTTGCTAACAACTCTCTTGAGGGTCCAATT
CCTCATGGCCTTACTAGTCTCAAACCTTCAGCATTTGAAGGTAATGATCTTTGTGATGGT
CCATTATCGAAATGCACGAGTGAACCAAAAGTAGCCCTCTGGACAATTATATTGGTGGTT
ATCGCAGTTGCAGCAGCAGTAGCAGCAATTGTTGTTGTTATCATCATTCTTCGTCGGGGC
AAGCAGACACCCGAAACAGAAACAAGACCAACGCCTACACCCTCTGGAGCTGCAGGGGGC
GCTACTAACCAAACAGGAGCGCCCTCAGCAGCAGATCTAAACAAAATGGAACAGGGCAGC
AATCAAGCAATGGCTGCTCCTGCTCCTGACCAGTCTCCAGAGGGGACCGGTGGACTAAAT
AATAATAAGAGGCCTGAAGTACAAGCAATACAAAAACTTCTATTCTTAAAAGATGATATT
GAAAAATTTGATTTGCCAGATCTACTAAAGGCTTCAGCTGAAATATTGGGTAGCGGTGTA
TTTGGTTCGACTTATAAAGCTGCACTTAGCATGGGACGTGTTATGGTTGTCAAAAGGTTT
AGGCAAATGAATAATGTAGGCAAGGAAGATTTTCATGAGCATATGAGAAGGCTAGGTAGG
TTGAGTCATAAGAACTTACTTCCTGTTGTAGCTTTTTACTATAGGAAAGAGGAAAAGCTT
TTGGTCTCAGAGTATGTCAACAATGTCAGCCTTGCAGTTCATCTTCATGGTAATAAATCG
CGGGGGCAACCAAGTCTTGATTGGCCAACTCGATTGAAAATTGTAAAGGGAGTAGCCAAA
GGACTATTGTACCTCTACAACGAGCTACCAAGCTTGACAGCACCCCACGGTCACCTCAAG
TCCTCGAACGTACTTCTAAACGAATCCTACGAGCCCCTCCTCACGGACTATGCATTACTA
CCCGTAGTAAACCTAGAACACGCTCAAGAACACATGATTGCTTACAAATCTCCTGAATTC
AAACATAGTGGTCGTATCACACGTAAAAATGATGTGTGGACGCTTGGAATATTAATCCTC
GAGATCATAACGGGCAAATTCCCGTCTAATTTCTTGCAACAAGGCAAGGGGAGTGACACG
GATTTGGCTACGTGGGTAAGGTCCGTGGTAAATGAGGACATGATGGAGGTAGATGTATTC
GAGAAGGAAATGAGAGGTACGACGAATTCAGAGGGGGAAATGATGAAGTTATTGAAGATA
GCTTTGGGTTGTTGTGATCTTGATATGGAAAAGAGGTTTGATATGAAGGAAGCAATGGAG
AGGATTAAGGAAGTAAAAGAGAGAGATGGGGATGATGATTTTTACTCTACAAGAGGATTA
TCTGATGATTATACGCAAGTTTCGATGAACATTTGA