Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035468
CDS Infomation

pacid=37427148 polypeptide=PGSC0003DMP400024117 locus=PGSC0003DMG400013634 ID=PGSC0003DMT400035468.v4.03 annot-version=v4.03
Sequence

ATGAAGTATGTGTTGGTTACTGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTCACCGCC
AGCAGCATCGGTCTTATTCTTAAGTCATGTGGTCTTCGCGTTACTTCCATTAAGATAGAT
CCTTACTTGAACACCGATGCTGGAACAATGTCTCCATTCGAGCATGGAGAAGTATTTGTC
TTGGATGATGGCGGAGAGGTGGACCTAGACCTTGGTAACTATGAGCGCTTTCTGGATATT
AAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGTCTGTTCTTGATAAG
GAGAGAAGAGGAGATTATTTGGGGAAGACTGTTCAGGTCGTCCCTCACATTACAGATGCC
ATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCT
GATGTTTGTGTCATAGAACTGGGTGGAACTATAGGAGATATTGAGTCTATGCCATTTATT
GAAGCTTTAGGACAATTCTCATATCGTGTAGGTGCTGGAAATTTTTGCTTGATACATGTC
AGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAGAAAACAAAGCCAACTCAACACAGT
GTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACG
GGACTTGATGATAATGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCGGTAGATAGC
ATCATCAGTCTTTACGATACCTCAAACATTTGGCGAGTTCCTTTGATTTTAAGAGATCAG
AAGGCCCATGAAGCAATTCTGAAAGTCCTGAACCTTAAAGGAGTTTCTCGGGAGCCTGTC
TTTGGAGAATGGACATCTCGGACTGAACTTTGTGACAGACTACATGAGCCAGTTAGAGTT
GCCATGGTGGGAAAGTACACAGGACTTTCAGATTCGTATCTCTCTGTACTGAAGGCTCTT
TTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTAGATTGGGTTCCAGCCAGTGAC
CTTGAAAATGAAACTGCCAAAGAGAATCCTGAAAATTATAGAAATTCGTGGAATTTGCTG
AAGGGAGCGGATGCTATAGTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAA
ATACTTGCTGCCAAATATGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTCTAGGC
ATGCAAATTGCTGTTATCGAGTATGCTAGATCCATTCTTGGGTTGCAAGATGCGAACAGT
ACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTTATGCCGGAGGGTTCAAAA
ACGCATATGGGTGGTACCATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAAAGAT
TCTAAATCTACAAAACTATTTGGCAACCGGAGCTTTGTAGATGAGAGGCACCGTCATAGA
TATGAGGTGAATCCTGATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGC
AAAGATGAAACTGGTCGCCGCATGGAGATTGTTGAGCTGCCTAATCATCCGTACTTCATT
GGTGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTA
GGGCTTATAGCAGCAGCATGCGGGCAGCTTGATTCTCTTTTGAAGAAGGGTGGAGCACCG
ACTCATGTACTTAGCAACGGTACATCTGGTGAAAAATTGCATCGAAATGGAAATGGAAAT
GGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACAT
GTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400024117
PEP Infomation

pacid=37427148 transcript=PGSC0003DMT400035468 locus=PGSC0003DMG400013634 ID=PGSC0003DMT400035468.v4.03 annot-version=v4.03
Sequence

MKYVLVTGGVVSGLGKGVTASSIGLILKSCGLRVTSIKIDPYLNTDAGTMSPFEHGEVFV
LDDGGEVDLDLGNYERFLDIKLTRDNNITTGKIYQSVLDKERRGDYLGKTVQVVPHITDA
IQEWIERVAVIPVDGEDSPADVCVIELGGTIGDIESMPFIEALGQFSYRVGAGNFCLIHV
SLVPVLNVVGEQKTKPTQHSVRGLRSLGLTPNILACRSTTGLDDNVKEKLSRFCHVPVDS
IISLYDTSNIWRVPLILRDQKAHEAILKVLNLKGVSREPVFGEWTSRTELCDRLHEPVRV
AMVGKYTGLSDSYLSVLKALLHSSVACRRKLFVDWVPASDLENETAKENPENYRNSWNLL
KGADAIVVPGGFGDRGVEGKILAAKYARENRIPYLGICLGMQIAVIEYARSILGLQDANS
TEFDPNTPNPCVIFMPEGSKTHMGGTMRLGSRRTYFQVKDSKSTKLFGNRSFVDERHRHR
YEVNPDMVQQFEDAGLSFTGKDETGRRMEIVELPNHPYFIGVQFHPEFKSRPGKPSAVFL
GLIAAACGQLDSLLKKGGAPTHVLSNGTSGEKLHRNGNGNGTTLANGSLDGIYRNGNGVH
V*

Transcript Sequence

Transcript ID

PGSC0003DMT400035468
Transcript Infomation

pacid=37427148 locus=PGSC0003DMG400013634 ID=PGSC0003DMT400035468.v4.03 annot-version=v4.03
Sequence

ATGAAGTATGTGTTGGTTACTGGAGGAGTGGTTAGCGGGCTCGGTAAAGGAGTCACCGCC
AGCAGCATCGGTCTTATTCTTAAGTCATGTGGTCTTCGCGTTACTTCCATTAAGATAGAT
CCTTACTTGAACACCGATGCTGGAACAATGTCTCCATTCGAGCATGGAGAAGTATTTGTC
TTGGATGATGGCGGAGAGGTGGACCTAGACCTTGGTAACTATGAGCGCTTTCTGGATATT
AAGTTGACACGTGACAACAATATAACTACTGGAAAAATTTACCAGTCTGTTCTTGATAAG
GAGAGAAGAGGAGATTATTTGGGGAAGACTGTTCAGGTCGTCCCTCACATTACAGATGCC
ATTCAAGAGTGGATTGAACGTGTGGCTGTCATACCAGTTGATGGAGAGGATAGTCCAGCT
GATGTTTGTGTCATAGAACTGGGTGGAACTATAGGAGATATTGAGTCTATGCCATTTATT
GAAGCTTTAGGACAATTCTCATATCGTGTAGGTGCTGGAAATTTTTGCTTGATACATGTC
AGCCTTGTGCCCGTTTTGAATGTAGTTGGTGAGCAGAAAACAAAGCCAACTCAACACAGT
GTCAGGGGTTTGAGAAGCCTGGGACTGACTCCAAATATTTTAGCCTGCCGGAGCACAACG
GGACTTGATGATAATGTGAAGGAGAAACTTTCCCGTTTTTGCCATGTTCCGGTAGATAGC
ATCATCAGTCTTTACGATACCTCAAACATTTGGCGAGTTCCTTTGATTTTAAGAGATCAG
AAGGCCCATGAAGCAATTCTGAAAGTCCTGAACCTTAAAGGAGTTTCTCGGGAGCCTGTC
TTTGGAGAATGGACATCTCGGACTGAACTTTGTGACAGACTACATGAGCCAGTTAGAGTT
GCCATGGTGGGAAAGTACACAGGACTTTCAGATTCGTATCTCTCTGTACTGAAGGCTCTT
TTGCATTCCTCTGTAGCTTGCCGCAGGAAACTCTTTGTAGATTGGGTTCCAGCCAGTGAC
CTTGAAAATGAAACTGCCAAAGAGAATCCTGAAAATTATAGAAATTCGTGGAATTTGCTG
AAGGGAGCGGATGCTATAGTAGTTCCCGGAGGATTTGGTGATAGAGGTGTGGAGGGTAAA
ATACTTGCTGCCAAATATGCACGTGAAAACAGGATTCCTTACCTGGGCATATGTCTAGGC
ATGCAAATTGCTGTTATCGAGTATGCTAGATCCATTCTTGGGTTGCAAGATGCGAACAGT
ACAGAGTTTGATCCCAACACTCCGAATCCTTGTGTAATTTTTATGCCGGAGGGTTCAAAA
ACGCATATGGGTGGTACCATGCGTCTTGGATCAAGAAGAACTTATTTTCAAGTCAAAGAT
TCTAAATCTACAAAACTATTTGGCAACCGGAGCTTTGTAGATGAGAGGCACCGTCATAGA
TATGAGGTGAATCCTGATATGGTGCAGCAATTTGAAGATGCTGGCCTTTCTTTCACTGGC
AAAGATGAAACTGGTCGCCGCATGGAGATTGTTGAGCTGCCTAATCATCCGTACTTCATT
GGTGTTCAATTTCATCCTGAATTTAAATCAAGGCCAGGAAAACCGTCTGCCGTGTTCTTA
GGGCTTATAGCAGCAGCATGCGGGCAGCTTGATTCTCTTTTGAAGAAGGGTGGAGCACCG
ACTCATGTACTTAGCAACGGTACATCTGGTGAAAAATTGCATCGAAATGGAAATGGAAAT
GGAACGACTCTTGCCAATGGATCTTTAGATGGGATTTATCGCAATGGGAATGGTGTACAT
GTCTAA