Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035453
CDS Infomation

pacid=37425230 polypeptide=PGSC0003DMP400024105 locus=PGSC0003DMG400013627 ID=PGSC0003DMT400035453.v4.03 annot-version=v4.03
Sequence

ATGGACAATTCTCACAGTATTCGTCACGAAATTACATCTCATGATCCACATTGGTCGTAT
GACGTTTTCTTGAGTTTTAGAGGTGAGGATACTCGAAAGAGCTTTGTTGATCACCTCTAT
ACTAGTTTACGCGAAAAAGGAATACACACATTTCGTGATGATAAAGAGTTGAGTAGAGGA
AAATCAATTTCCCCTGAACTCCTTAACGCTATAGAAAAATCGAGGTTTGCAGTTGTTATT
TTTTCAAAAAACTATGCAGATTCATCGTGGTGTTTGGAGGAGCTGACGAAGATCGTTGAA
TGCAACCAACAGAGGGGACAAACGCTGATTCCAGTGTTTTATAGTGTGGATCCTTCTGTT
GTGAGAAAACAGAAGGAGAGTTATGGAGACGCTTTCGCTAAACATGAAGAGAATTTGAAG
GGATCAGATGAGAGGAATAAGATCCAAAGATGGAGGGATGCTTTAAAGGATGCTGCTAAC
ATCTCTGGATTTGACGTCCAACACATGGAAGATGGGCATGAATCAAGGTGCATTAGACAG
ATTGCTTTGACAATTTTAAAAAGATTGGGGCGTGTACGACCTAAAGTTGCAGATCATTTA
GTGGGCATAGATCCCCATGTACAAAATGTTATATCTATGATGAATTTGCATTCTGAAGCT
GATGTTCGCATAATTGGGATATGGGGTATGGGAGGCATTGGCAAATCAACTATTGCGCGA
GCTGTTTTTGATCAACTTCAGGAAGAGTTCGAAGGTAGTTGCTTTCTTGATAATGTTAGA
GAAGTTTCAACAAAATCCGGACTTCAGCCTTTGTCAGAAAAAATGATTTCTGATACATTG
AAAGAGAGTAAAGACAATCTTTACACCAGCACCACTTTGCTGATGAACAGGTTGAGCTAT
AAAAGAGTGATGGTCGTTCTTGACGATGTGGATAATGATGAGCAGATAGACTATTTGGCT
GGAAAGCATGAATGGTTCGGAGCTGGGAGCAGAATCATCATCACCACTAGAAACAGGCAA
TTGTTATTGTCTCATGGGGTGGATCATGTGTATGAAGTTAGTCCTTTAGGGATTAATGAA
GCTTTGATGCTCTTCAACAAGTTTGCATTCAAAGGACGTGAGCCGGAAGGTGATTTTTCT
GAACTGGCGCTGCAAGTCGCGCAATGTGCTTGGGGCCTTCCACTGGCTCTCAAAGTATTG
GGTTCATTTCTACATAAAAGAACAAAAGCAGAATGGAAGAGCGAGTTGAAGAGGCTGAAA
GAAATTCCCCATGATGATGTGATAGGGAAACTTAAATTGAGCATTGATGCATTGAGTGAT
CTAGACAAGCAAATATTGCTTGACATTGCTTGTTTCTTCAAGGCGAAGCGAAGAGAACCT
GTCACCAGAAAACTCCTTGCTTTCGGTTTCAAACCTGAAATTGGAGTACCAGTACTTATT
CAAAGATCACTTTTATCCATATCTGATGATGACAGGTTCCAGATGCATGATTTAGTTCAA
GAAACCGCTTGGTACATGGTTCGCCATGGACATCCTAGAGAGAAATTCAGCAGGTTGTGG
GTTCCTGACGATATATGCGATGTTATGTCAAAGAAATCAGGTACCGGAGCAATTGAGGGA
ATAATATTGGCGTACTCTGAAAAGCAGAAGATGAACTTAGGATCACAAGCATTAAAGGGT
ATGGAAAATCTACGTCTTCTGAAAATCCAGAATGCTTACTTCCGTAAAGGTCCGAGTTAT
CTTCCAAATGAGTTACAATGGCTCAGTTGGCACAATTTCCCTTCAACCTCACTTCCACAA
GACTTTGCGGGAGAAAAGCTAGTTGGACTTAAACTAATTCATGGCCAAATTTCACAACTT
TGGCCAGAAGATAAGTATCTTGACAAGCTGAAGTATTTAAACCTCAGCTACTCCAAAGGG
TTAATTAGCACTCCCAACTTTAGCCAAATGCCATATCTTGAAAAGTTGAACCTGAGCAAC
TGTACGAACTTGGTAGGAGTTCACAGATCACTTGGAGATCTTACAAGGCTTCGGTACTTG
AATTTGTCTCACTGCTCAAAGCTAAAGAGTATTTCGAATAACATCCATCTCGAGTCTTTG
GAAAAGCTTCTTCTGTGGGACTGCACAAAACTCGAAAGTTTCCCTCAAATCATAGGATTA
ATGCCAAAGCTTTCAGAACTTCACTTGGAAGGGACTGCAATCAAAGAGCTACCCGAGTCC
ATCATAAATCTCGGTGGGATTGTGTCCATAAACCTCAGGAATTGCAAGGATTTGGAATGT
ATAACTTATAGCATTTGTGGTTTGAGATGTCTCAGGACTCTAAATCTATCTGGCTGTTCA
AAACTTGAGACATTGCCAGAAACCCTTGGACAAGTGGAAACTTTAGAAGAACTACTTGTA
GATGGAACTGCAATTAGCAAGCTACCATCAACCGTCTCGGAGATGGAAAACTTGAAAATC
CTTTCTTTCAGTGGATGCAAGAAAAGGAAAAAAGATAAGGCGTTCTGGAAAAACAGTTTT
AGCTTTCGCTTGAATCTAAAGTTAACTTCACTGCCAAATGTCAGGCGCATCACAAGACGA
TTAAATACTAGAAGAAATAAGAAGCCAGAAATATCAGGACCATCATTATCTGGTTTGTGT
GCCTTAAAGAAACTAGATCTTAGTGACTCTGATTTGGTAGATGAAATCGCTGGTGATGTT
TGGCAGCTGTCCTCATTGGAAGAGTTAAATTTGAGCCGAAATAATTTTGATGTATTTCCA
TCAAGAATATATGGGTTACAGCAATTCAAGGTCCTGAAAGTGGATGAATGCAAAAGCCTT
GTAGCCTTGCCTGATCTTCCCTGGAGTATTGTAATGATAGAGGCAAATGAGTGCCCTTCC
TTGCAGAGTCTTGGAAATCTTTCACCGCAACATGCATTCTTGAAAAAGGTCTCGTTTTTC
AATTGTTTCAAATTGTACCAACAAAGCCAAAAAACCAGCATTGGCGCTGCGGATTTGTTG
CTGCATTTGCTTCTCCAGGGTCACTCCACCTTTTATAGTCAATTTAGTATACTGATTGCT
GGAGGAAAAATCCCCGAGTGGTTTGGTTATCAAAAAATGGGTCGATCAATCTCAGTCCAG
CTACCTACAGATTGGCAAGACAACATTGCAGGGGTTGCATTCTCATTTGTTTTCGAGTGC
CTTGTTCCAAAATCAAAACTAGGTGTTACTTTCAAGTTGATAAGTCCAAACCACCGAGAA
TACACATTTGAAAGTGCTCCAGCATCTGCTGCTTCAAAGATGGGGGAGGAGTACAAATAT
GATCACTTGTGGATAGCTTATATCTCTTTCCATCTTTTTCGTCTCCTCTTCCCCGAATTC
ACAACTGAAGATTGGAGTAAGGTTTGTTGTTGCCTTTCAATTAGCCTAAGACAAGAGCCA
TGGACCAAAGTGAGGAGGTGTGGGATTCATCTAGTGTACAAAAAAGACTTGACAACATCA
TTGGCAGCTGGGAGCAAAGAATTGACGGTGTATGACGAGGGAGGAGATTCAAAAAGGAAA
GAAGAGGTGAAAGAGGATATCGTGGCACTAATGGCTGGGGTTAACGTTTTGAATTGGGAC
GTTGACTCCATTGAGCAAGATAACACTCAGCTTGCGAATTTGAGGAAATCACTTGCCTAT
AAGATTCAGAAGACTCTTTCCTTTGATTGCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400024105
PEP Infomation

pacid=37425230 transcript=PGSC0003DMT400035453 locus=PGSC0003DMG400013627 ID=PGSC0003DMT400035453.v4.03 annot-version=v4.03
Sequence

MDNSHSIRHEITSHDPHWSYDVFLSFRGEDTRKSFVDHLYTSLREKGIHTFRDDKELSRG
KSISPELLNAIEKSRFAVVIFSKNYADSSWCLEELTKIVECNQQRGQTLIPVFYSVDPSV
VRKQKESYGDAFAKHEENLKGSDERNKIQRWRDALKDAANISGFDVQHMEDGHESRCIRQ
IALTILKRLGRVRPKVADHLVGIDPHVQNVISMMNLHSEADVRIIGIWGMGGIGKSTIAR
AVFDQLQEEFEGSCFLDNVREVSTKSGLQPLSEKMISDTLKESKDNLYTSTTLLMNRLSY
KRVMVVLDDVDNDEQIDYLAGKHEWFGAGSRIIITTRNRQLLLSHGVDHVYEVSPLGINE
ALMLFNKFAFKGREPEGDFSELALQVAQCAWGLPLALKVLGSFLHKRTKAEWKSELKRLK
EIPHDDVIGKLKLSIDALSDLDKQILLDIACFFKAKRREPVTRKLLAFGFKPEIGVPVLI
QRSLLSISDDDRFQMHDLVQETAWYMVRHGHPREKFSRLWVPDDICDVMSKKSGTGAIEG
IILAYSEKQKMNLGSQALKGMENLRLLKIQNAYFRKGPSYLPNELQWLSWHNFPSTSLPQ
DFAGEKLVGLKLIHGQISQLWPEDKYLDKLKYLNLSYSKGLISTPNFSQMPYLEKLNLSN
CTNLVGVHRSLGDLTRLRYLNLSHCSKLKSISNNIHLESLEKLLLWDCTKLESFPQIIGL
MPKLSELHLEGTAIKELPESIINLGGIVSINLRNCKDLECITYSICGLRCLRTLNLSGCS
KLETLPETLGQVETLEELLVDGTAISKLPSTVSEMENLKILSFSGCKKRKKDKAFWKNSF
SFRLNLKLTSLPNVRRITRRLNTRRNKKPEISGPSLSGLCALKKLDLSDSDLVDEIAGDV
WQLSSLEELNLSRNNFDVFPSRIYGLQQFKVLKVDECKSLVALPDLPWSIVMIEANECPS
LQSLGNLSPQHAFLKKVSFFNCFKLYQQSQKTSIGAADLLLHLLLQGHSTFYSQFSILIA
GGKIPEWFGYQKMGRSISVQLPTDWQDNIAGVAFSFVFECLVPKSKLGVTFKLISPNHRE
YTFESAPASAASKMGEEYKYDHLWIAYISFHLFRLLFPEFTTEDWSKVCCCLSISLRQEP
WTKVRRCGIHLVYKKDLTTSLAAGSKELTVYDEGGDSKRKEEVKEDIVALMAGVNVLNWD
VDSIEQDNTQLANLRKSLAYKIQKTLSFDC*

Transcript Sequence

Transcript ID

PGSC0003DMT400035453
Transcript Infomation

pacid=37425230 locus=PGSC0003DMG400013627 ID=PGSC0003DMT400035453.v4.03 annot-version=v4.03
Sequence

ATGGACAATTCTCACAGTATTCGTCACGAAATTACATCTCATGATCCACATTGGTCGTAT
GACGTTTTCTTGAGTTTTAGAGGTGAGGATACTCGAAAGAGCTTTGTTGATCACCTCTAT
ACTAGTTTACGCGAAAAAGGAATACACACATTTCGTGATGATAAAGAGTTGAGTAGAGGA
AAATCAATTTCCCCTGAACTCCTTAACGCTATAGAAAAATCGAGGTTTGCAGTTGTTATT
TTTTCAAAAAACTATGCAGATTCATCGTGGTGTTTGGAGGAGCTGACGAAGATCGTTGAA
TGCAACCAACAGAGGGGACAAACGCTGATTCCAGTGTTTTATAGTGTGGATCCTTCTGTT
GTGAGAAAACAGAAGGAGAGTTATGGAGACGCTTTCGCTAAACATGAAGAGAATTTGAAG
GGATCAGATGAGAGGAATAAGATCCAAAGATGGAGGGATGCTTTAAAGGATGCTGCTAAC
ATCTCTGGATTTGACGTCCAACACATGGAAGATGGGCATGAATCAAGGTGCATTAGACAG
ATTGCTTTGACAATTTTAAAAAGATTGGGGCGTGTACGACCTAAAGTTGCAGATCATTTA
GTGGGCATAGATCCCCATGTACAAAATGTTATATCTATGATGAATTTGCATTCTGAAGCT
GATGTTCGCATAATTGGGATATGGGGTATGGGAGGCATTGGCAAATCAACTATTGCGCGA
GCTGTTTTTGATCAACTTCAGGAAGAGTTCGAAGGTAGTTGCTTTCTTGATAATGTTAGA
GAAGTTTCAACAAAATCCGGACTTCAGCCTTTGTCAGAAAAAATGATTTCTGATACATTG
AAAGAGAGTAAAGACAATCTTTACACCAGCACCACTTTGCTGATGAACAGGTTGAGCTAT
AAAAGAGTGATGGTCGTTCTTGACGATGTGGATAATGATGAGCAGATAGACTATTTGGCT
GGAAAGCATGAATGGTTCGGAGCTGGGAGCAGAATCATCATCACCACTAGAAACAGGCAA
TTGTTATTGTCTCATGGGGTGGATCATGTGTATGAAGTTAGTCCTTTAGGGATTAATGAA
GCTTTGATGCTCTTCAACAAGTTTGCATTCAAAGGACGTGAGCCGGAAGGTGATTTTTCT
GAACTGGCGCTGCAAGTCGCGCAATGTGCTTGGGGCCTTCCACTGGCTCTCAAAGTATTG
GGTTCATTTCTACATAAAAGAACAAAAGCAGAATGGAAGAGCGAGTTGAAGAGGCTGAAA
GAAATTCCCCATGATGATGTGATAGGGAAACTTAAATTGAGCATTGATGCATTGAGTGAT
CTAGACAAGCAAATATTGCTTGACATTGCTTGTTTCTTCAAGGCGAAGCGAAGAGAACCT
GTCACCAGAAAACTCCTTGCTTTCGGTTTCAAACCTGAAATTGGAGTACCAGTACTTATT
CAAAGATCACTTTTATCCATATCTGATGATGACAGGTTCCAGATGCATGATTTAGTTCAA
GAAACCGCTTGGTACATGGTTCGCCATGGACATCCTAGAGAGAAATTCAGCAGGTTGTGG
GTTCCTGACGATATATGCGATGTTATGTCAAAGAAATCAGGTACCGGAGCAATTGAGGGA
ATAATATTGGCGTACTCTGAAAAGCAGAAGATGAACTTAGGATCACAAGCATTAAAGGGT
ATGGAAAATCTACGTCTTCTGAAAATCCAGAATGCTTACTTCCGTAAAGGTCCGAGTTAT
CTTCCAAATGAGTTACAATGGCTCAGTTGGCACAATTTCCCTTCAACCTCACTTCCACAA
GACTTTGCGGGAGAAAAGCTAGTTGGACTTAAACTAATTCATGGCCAAATTTCACAACTT
TGGCCAGAAGATAAGTATCTTGACAAGCTGAAGTATTTAAACCTCAGCTACTCCAAAGGG
TTAATTAGCACTCCCAACTTTAGCCAAATGCCATATCTTGAAAAGTTGAACCTGAGCAAC
TGTACGAACTTGGTAGGAGTTCACAGATCACTTGGAGATCTTACAAGGCTTCGGTACTTG
AATTTGTCTCACTGCTCAAAGCTAAAGAGTATTTCGAATAACATCCATCTCGAGTCTTTG
GAAAAGCTTCTTCTGTGGGACTGCACAAAACTCGAAAGTTTCCCTCAAATCATAGGATTA
ATGCCAAAGCTTTCAGAACTTCACTTGGAAGGGACTGCAATCAAAGAGCTACCCGAGTCC
ATCATAAATCTCGGTGGGATTGTGTCCATAAACCTCAGGAATTGCAAGGATTTGGAATGT
ATAACTTATAGCATTTGTGGTTTGAGATGTCTCAGGACTCTAAATCTATCTGGCTGTTCA
AAACTTGAGACATTGCCAGAAACCCTTGGACAAGTGGAAACTTTAGAAGAACTACTTGTA
GATGGAACTGCAATTAGCAAGCTACCATCAACCGTCTCGGAGATGGAAAACTTGAAAATC
CTTTCTTTCAGTGGATGCAAGAAAAGGAAAAAAGATAAGGCGTTCTGGAAAAACAGTTTT
AGCTTTCGCTTGAATCTAAAGTTAACTTCACTGCCAAATGTCAGGCGCATCACAAGACGA
TTAAATACTAGAAGAAATAAGAAGCCAGAAATATCAGGACCATCATTATCTGGTTTGTGT
GCCTTAAAGAAACTAGATCTTAGTGACTCTGATTTGGTAGATGAAATCGCTGGTGATGTT
TGGCAGCTGTCCTCATTGGAAGAGTTAAATTTGAGCCGAAATAATTTTGATGTATTTCCA
TCAAGAATATATGGGTTACAGCAATTCAAGGTCCTGAAAGTGGATGAATGCAAAAGCCTT
GTAGCCTTGCCTGATCTTCCCTGGAGTATTGTAATGATAGAGGCAAATGAGTGCCCTTCC
TTGCAGAGTCTTGGAAATCTTTCACCGCAACATGCATTCTTGAAAAAGGTCTCGTTTTTC
AATTGTTTCAAATTGTACCAACAAAGCCAAAAAACCAGCATTGGCGCTGCGGATTTGTTG
CTGCATTTGCTTCTCCAGGGTCACTCCACCTTTTATAGTCAATTTAGTATACTGATTGCT
GGAGGAAAAATCCCCGAGTGGTTTGGTTATCAAAAAATGGGTCGATCAATCTCAGTCCAG
CTACCTACAGATTGGCAAGACAACATTGCAGGGGTTGCATTCTCATTTGTTTTCGAGTGC
CTTGTTCCAAAATCAAAACTAGGTGTTACTTTCAAGTTGATAAGTCCAAACCACCGAGAA
TACACATTTGAAAGTGCTCCAGCATCTGCTGCTTCAAAGATGGGGGAGGAGTACAAATAT
GATCACTTGTGGATAGCTTATATCTCTTTCCATCTTTTTCGTCTCCTCTTCCCCGAATTC
ACAACTGAAGATTGGAGTAAGGTTTGTTGTTGCCTTTCAATTAGCCTAAGACAAGAGCCA
TGGACCAAAGTGAGGAGGTGTGGGATTCATCTAGTGTACAAAAAAGACTTGACAACATCA
TTGGCAGCTGGGAGCAAAGAATTGACGGTGTATGACGAGGGAGGAGATTCAAAAAGGAAA
GAAGAGGTGAAAGAGGATATCGTGGCACTAATGGCTGGGGTTAACGTTTTGAATTGGGAC
GTTGACTCCATTGAGCAAGATAACACTCAGCTTGCGAATTTGAGGAAATCACTTGCCTAT
AAGATTCAGAAGACTCTTTCCTTTGATTGCTAG