Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035439
CDS Infomation

pacid=37464980 polypeptide=PGSC0003DMP400024096 locus=PGSC0003DMG400013616 ID=PGSC0003DMT400035439.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAATCATGTGGAATCCAAATATTTCTCTGTTTCAATTCTGGGCACCCATCAAG
GTCAATGGATCCACTTTCCTGTCCACTGCGGATCAACCATTTGCTTTCTATAACCAACTT
GATAAGAGGCTCTCTTCATACAGGAAGCTCTGTTTAGATACTATGATTCCCATGGACAAC
AAGGAAATTCCATTTGGTCCCCCTGGACGAGTTTTCTCAAGATACTTGCCAGAATATAAC
CCCAACGTCCTAAGCTACTCCTCTGCAGAGTTTCCACTGCTTCAAACTGCAATTCCCTTG
GGAATTCATTCTTATTATGCATTTCCAGTTTCCAACCTCCATGATGGCCAGTGCCTTGGT
GTATTCGAGATTGTATCTACACTACCATATCTCCCTCTTCACACCCTTATTAAGTGGTTG
AATTTCGAATCAGTTGGCTTGTACATTCCTAACTCATTGGGCATGCCTTTTGGACCTTCA
AAGCGGCTGGATGATGAAAGACTTGGCGATATAAAGGCCGGGTTATATGAGATCCTTGAA
AGACATAGTTTACCCTTTGCTCAAATTTGGATTCCTTTTTCTCTACCTTCCTCTTTGAAA
GTCTTGTATCGTGTTGGTGGCTCAATCAATGAACGTGCACAATCAATGTATTATGAGTTT
GAATATTCTTCTGAGGTCTGTTTTATTAAGAGTGGCGAGGCATTGGTTGGGAGGGCATTT
GCATCCCAAGGTTCATGCTTTTGCAAAGATGTTACTCTATTAAGCATCAATGAGTACCCT
GTGTTGCCTACTGCACGAAAAGCTAGATTCACTCACAGTTTTGCAATTTGTTTGCAAAGT
AAATGCGCCAACAATTTTGTATGCGTAGTTGAGTACTTTCTGCCAAGCAACGAAATGGCT
GTTAGAGATACAAAGACTTTCTTAAACATGCTTTTAACCACAATGAAAGAACTACTTCCA
GGTTTCATAGTTGCTTCTGGAAATGAACTAGGGCAGAGGATGCTCGTTGAAGTTGTTAAA
GTTTCCCCGAATGATGAACTTGACTCCTTTGAAATTGGCCAAACTCTGCCGAGTGTTCAA
TCACTTCAGGATGGAGGAGAAACAATAGCAATTGATTCTTTCTATCAAGAGTCAGATTTT
ATGAAGAAGCTTGTTGATGCTCTTGCACTAGTGATTTCTTCTTGTTCATTAGACAAGTGT
GACTCACTCAACTGTGAAGGGACAGTGGAAGTTGATCCGTCACTGCCTCATCCAATAGAG
GAAGCTGTGACAAACAGAGGAACGGTTAACGTGGATGTAGCACATGATGACCACATTGAG
GATACAAGTGAAATGATGCAACTTGATTCACACTTTGAGCAACCAAATTTAGAAATTAAT
TCTGTAGGCGCAAGGAGTAATGACACAGTGGAGCATAGGGATTTTAGTTATGCAAGACAA
TCGGTTGAAGCTGAAGCTATAAACAGAGAAAACAACTTTGTCAGTGGAGCAATGACTAAC
AACGAGAAAATCCATTCACAGAAGAACAACGAATTACGAAGGATAGAAAAAGATCATGGG
ATTACTCGCGAGACTTTGGAGCAGCAATATGGCACGCTTCTTAAAGATGCTGCCAAAAAT
CTAGGTGTTAGTCGAGCAACACTAAAACGGATATGTAGAGTATATGAAATCACTAGATGG
CCAAATCATAAGACTAGAAAGGTTAATGTCCATGTTAGCCATGGCGTATCTTTTCAAGGT
GCTGAACCATATGTGGGCGATCAACAATGTCCTGCTCTTTCCCAAGAAAAAGGCATCAAA
TATTTGGGTAACAAAAGATCTCCTGCAACAGGAGTATCTCGTGATGGTGTGATGACTTTA
AAGGTTACATATAGAGCTGATATGATAAAATTTCAACTCTCCCTTTTATCAACGAGGGTA
GAATTGGAGGGGGAAGTGGAAAAGAGGTTTAAGATATCAAGGTTTTCAATAAAGTATCAA
GATGAAGATGACGATTGGATTTTGATAACTTCTGATTCAGATTTGAGGGACGGGATGAAT
TCACTTAGATTGTTGGGAAGGAATACAATGAGATTAGAGGTTAACCCAGAATCTGACACA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400024096
PEP Infomation

pacid=37464980 transcript=PGSC0003DMT400035439 locus=PGSC0003DMG400013616 ID=PGSC0003DMT400035439.v4.03 annot-version=v4.03
Sequence

MEKIMWNPNISLFQFWAPIKVNGSTFLSTADQPFAFYNQLDKRLSSYRKLCLDTMIPMDN
KEIPFGPPGRVFSRYLPEYNPNVLSYSSAEFPLLQTAIPLGIHSYYAFPVSNLHDGQCLG
VFEIVSTLPYLPLHTLIKWLNFESVGLYIPNSLGMPFGPSKRLDDERLGDIKAGLYEILE
RHSLPFAQIWIPFSLPSSLKVLYRVGGSINERAQSMYYEFEYSSEVCFIKSGEALVGRAF
ASQGSCFCKDVTLLSINEYPVLPTARKARFTHSFAICLQSKCANNFVCVVEYFLPSNEMA
VRDTKTFLNMLLTTMKELLPGFIVASGNELGQRMLVEVVKVSPNDELDSFEIGQTLPSVQ
SLQDGGETIAIDSFYQESDFMKKLVDALALVISSCSLDKCDSLNCEGTVEVDPSLPHPIE
EAVTNRGTVNVDVAHDDHIEDTSEMMQLDSHFEQPNLEINSVGARSNDTVEHRDFSYARQ
SVEAEAINRENNFVSGAMTNNEKIHSQKNNELRRIEKDHGITRETLEQQYGTLLKDAAKN
LGVSRATLKRICRVYEITRWPNHKTRKVNVHVSHGVSFQGAEPYVGDQQCPALSQEKGIK
YLGNKRSPATGVSRDGVMTLKVTYRADMIKFQLSLLSTRVELEGEVEKRFKISRFSIKYQ
DEDDDWILITSDSDLRDGMNSLRLLGRNTMRLEVNPESDT*

Transcript Sequence

Transcript ID

PGSC0003DMT400035439
Transcript Infomation

pacid=37464980 locus=PGSC0003DMG400013616 ID=PGSC0003DMT400035439.v4.03 annot-version=v4.03
Sequence

ATGGAGAAAATCATGTGGAATCCAAATATTTCTCTGTTTCAATTCTGGGCACCCATCAAG
GTCAATGGATCCACTTTCCTGTCCACTGCGGATCAACCATTTGCTTTCTATAACCAACTT
GATAAGAGGCTCTCTTCATACAGGAAGCTCTGTTTAGATACTATGATTCCCATGGACAAC
AAGGAAATTCCATTTGGTCCCCCTGGACGAGTTTTCTCAAGATACTTGCCAGAATATAAC
CCCAACGTCCTAAGCTACTCCTCTGCAGAGTTTCCACTGCTTCAAACTGCAATTCCCTTG
GGAATTCATTCTTATTATGCATTTCCAGTTTCCAACCTCCATGATGGCCAGTGCCTTGGT
GTATTCGAGATTGTATCTACACTACCATATCTCCCTCTTCACACCCTTATTAAGTGGTTG
AATTTCGAATCAGTTGGCTTGTACATTCCTAACTCATTGGGCATGCCTTTTGGACCTTCA
AAGCGGCTGGATGATGAAAGACTTGGCGATATAAAGGCCGGGTTATATGAGATCCTTGAA
AGACATAGTTTACCCTTTGCTCAAATTTGGATTCCTTTTTCTCTACCTTCCTCTTTGAAA
GTCTTGTATCGTGTTGGTGGCTCAATCAATGAACGTGCACAATCAATGTATTATGAGTTT
GAATATTCTTCTGAGGTCTGTTTTATTAAGAGTGGCGAGGCATTGGTTGGGAGGGCATTT
GCATCCCAAGGTTCATGCTTTTGCAAAGATGTTACTCTATTAAGCATCAATGAGTACCCT
GTGTTGCCTACTGCACGAAAAGCTAGATTCACTCACAGTTTTGCAATTTGTTTGCAAAGT
AAATGCGCCAACAATTTTGTATGCGTAGTTGAGTACTTTCTGCCAAGCAACGAAATGGCT
GTTAGAGATACAAAGACTTTCTTAAACATGCTTTTAACCACAATGAAAGAACTACTTCCA
GGTTTCATAGTTGCTTCTGGAAATGAACTAGGGCAGAGGATGCTCGTTGAAGTTGTTAAA
GTTTCCCCGAATGATGAACTTGACTCCTTTGAAATTGGCCAAACTCTGCCGAGTGTTCAA
TCACTTCAGGATGGAGGAGAAACAATAGCAATTGATTCTTTCTATCAAGAGTCAGATTTT
ATGAAGAAGCTTGTTGATGCTCTTGCACTAGTGATTTCTTCTTGTTCATTAGACAAGTGT
GACTCACTCAACTGTGAAGGGACAGTGGAAGTTGATCCGTCACTGCCTCATCCAATAGAG
GAAGCTGTGACAAACAGAGGAACGGTTAACGTGGATGTAGCACATGATGACCACATTGAG
GATACAAGTGAAATGATGCAACTTGATTCACACTTTGAGCAACCAAATTTAGAAATTAAT
TCTGTAGGCGCAAGGAGTAATGACACAGTGGAGCATAGGGATTTTAGTTATGCAAGACAA
TCGGTTGAAGCTGAAGCTATAAACAGAGAAAACAACTTTGTCAGTGGAGCAATGACTAAC
AACGAGAAAATCCATTCACAGAAGAACAACGAATTACGAAGGATAGAAAAAGATCATGGG
ATTACTCGCGAGACTTTGGAGCAGCAATATGGCACGCTTCTTAAAGATGCTGCCAAAAAT
CTAGGTGTTAGTCGAGCAACACTAAAACGGATATGTAGAGTATATGAAATCACTAGATGG
CCAAATCATAAGACTAGAAAGGTTAATGTCCATGTTAGCCATGGCGTATCTTTTCAAGGT
GCTGAACCATATGTGGGCGATCAACAATGTCCTGCTCTTTCCCAAGAAAAAGGCATCAAA
TATTTGGGTAACAAAAGATCTCCTGCAACAGGAGTATCTCGTGATGGTGTGATGACTTTA
AAGGTTACATATAGAGCTGATATGATAAAATTTCAACTCTCCCTTTTATCAACGAGGGTA
GAATTGGAGGGGGAAGTGGAAAAGAGGTTTAAGATATCAAGGTTTTCAATAAAGTATCAA
GATGAAGATGACGATTGGATTTTGATAACTTCTGATTCAGATTTGAGGGACGGGATGAAT
TCACTTAGATTGTTGGGAAGGAATACAATGAGATTAGAGGTTAACCCAGAATCTGACACA
TGA