Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035344
CDS Infomation

pacid=37432549 polypeptide=PGSC0003DMP400024038 locus=PGSC0003DMG400013579 ID=PGSC0003DMT400035344.v4.03 annot-version=v4.03
Sequence

ATGGCGTCATCGACGGTATCGTCATGGATGATTGGGTCATGCATGTCAGTTCCTGGTGAA
AAGGAGCATGAATTACATGGTTTTTTTGGGATTTATAAGTCTAAATGCAAATGGGCTATT
CCAAGTAAAACAACCAAAGGGGTTTTCATAAACTCCAAATCCAATAATCCTCTTACATTT
CCAATCTCTTCTTCCTTCTTATCTCAACCTAACCGTACCATTACTGGATTTTCCTCTTCC
AATTCCTGTTTTCTATTTACCGGATCCGCAGTTACTCGTCCCCCAACAAAAAGTATCTCT
TCTGCTCAAACAGGGGAGGTAATGGCAATTGCTTCCCAATCGGCCATGGAGGCTGCACCA
AAGAAGAAACCTCCAACCAAAGAAAGGCGAGTTGTTGTGACAGGGATGGGTGTGACCACA
CCAGTTGGTCATGATCCCCACACGTTTTATGAAAACCTGCTTGAAGGTGTCAGTGGCATA
AGTGAAATAGAAGCTTTTGATTGTTCTCAGTATCCAACAAGAATTGCTGGAGAGATCAAG
TCTTTCTCAACTGATGGCTGGATTGTACCCAAACTTTCTAAAAGAATGGACAAGTTCATG
CTTTACATGCTAACGGCTGGTAAGAAAGCACTCTCAGATGGTGGAATTACTGAAGACATG
ATGAATGAATTGGATAAAAGAAGATGTGGAGTTTTAATTGGCTCTGCTATGGGTGGGATG
AAGGTTTTTAATGATGCAATAGAGGCTCTAAGGGTTTCCTATAGGAAGATGAATCCTTTT
TGTGTCCCATTTGCAACTACAAACATGGGTTCTGCCATGCTTGCCATGGACCTGGGATGG
ATGGGTCCAAATTATTCAATTTCAACAGCATGTGCAACAAGCAACTTCTGCATATTGAAT
GCCGCTAACCACATCATTAGAGGTGAAGCTGACTTGATGCTGTGCGGTGGATCAGATGCA
GCAATTATACCAATTGGATTGGGAGGATTTGTTGCTTGCAGAGCACTTTCACAGAGAAAT
ACCGACCCTTCAAGAGCTTCTCGGCCTTGGGATAGTAATCGCGATGGATTTGTCATGGGT
GAAGGAGCTGGTGTCCTGCTTCTGGAAGAACTTGAGCATGCCAAGCAAAGAGGTGCAACA
ATCTATGCTGAATTTCTAGGTGGAAGTTTTACTTGTGATGCTTATCACATGACAGAGCCT
CATCCTAAAGGAACTGGAGTCATCCTATGTGTAGAGAAGGCATTAGCTCAGTCAGGGGTA
TCCAAGGAAGATGTGAACTACATTAATGCGCATGCAACATCCACACCAGCAGGAGATCTT
AAGGAGTATCAAGCTCTTGTTCATTGTTTTGGCCAGAATCCAGAGTTGCGAGTTAACTCC
ACAAAATCTATGATTGGTCACCTGCTTGGAGCTGCTGGTGCTGTTGAAGCTGTGGCAACT
ATTCAGGCAATTCGAACTGGTTGGGTTCATCCAAATATTAATCTTGAAAACCCAGATGAA
GGCGTGGATACAAATATACTTGTTGGTCCCAAAAAGGAACGACTGGATATTAAGGTGGCA
TTATCTAATTCATTTGGATTTGGTGGCCACAACTCATCAATCTTATTTGCTCCTTACAAG
TAG

Peptide Sequence

PEP ID

PGSC0003DMP400024038
PEP Infomation

pacid=37432549 transcript=PGSC0003DMT400035344 locus=PGSC0003DMG400013579 ID=PGSC0003DMT400035344.v4.03 annot-version=v4.03
Sequence

MASSTVSSWMIGSCMSVPGEKEHELHGFFGIYKSKCKWAIPSKTTKGVFINSKSNNPLTF
PISSSFLSQPNRTITGFSSSNSCFLFTGSAVTRPPTKSISSAQTGEVMAIASQSAMEAAP
KKKPPTKERRVVVTGMGVTTPVGHDPHTFYENLLEGVSGISEIEAFDCSQYPTRIAGEIK
SFSTDGWIVPKLSKRMDKFMLYMLTAGKKALSDGGITEDMMNELDKRRCGVLIGSAMGGM
KVFNDAIEALRVSYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILN
AANHIIRGEADLMLCGGSDAAIIPIGLGGFVACRALSQRNTDPSRASRPWDSNRDGFVMG
EGAGVLLLEELEHAKQRGATIYAEFLGGSFTCDAYHMTEPHPKGTGVILCVEKALAQSGV
SKEDVNYINAHATSTPAGDLKEYQALVHCFGQNPELRVNSTKSMIGHLLGAAGAVEAVAT
IQAIRTGWVHPNINLENPDEGVDTNILVGPKKERLDIKVALSNSFGFGGHNSSILFAPYK
*

Transcript Sequence

Transcript ID

PGSC0003DMT400035344
Transcript Infomation

pacid=37432549 locus=PGSC0003DMG400013579 ID=PGSC0003DMT400035344.v4.03 annot-version=v4.03
Sequence

ATGGCGTCATCGACGGTATCGTCATGGATGATTGGGTCATGCATGTCAGTTCCTGGTGAA
AAGGAGCATGAATTACATGGTTTTTTTGGGATTTATAAGTCTAAATGCAAATGGGCTATT
CCAAGTAAAACAACCAAAGGGGTTTTCATAAACTCCAAATCCAATAATCCTCTTACATTT
CCAATCTCTTCTTCCTTCTTATCTCAACCTAACCGTACCATTACTGGATTTTCCTCTTCC
AATTCCTGTTTTCTATTTACCGGATCCGCAGTTACTCGTCCCCCAACAAAAAGTATCTCT
TCTGCTCAAACAGGGGAGGTAATGGCAATTGCTTCCCAATCGGCCATGGAGGCTGCACCA
AAGAAGAAACCTCCAACCAAAGAAAGGCGAGTTGTTGTGACAGGGATGGGTGTGACCACA
CCAGTTGGTCATGATCCCCACACGTTTTATGAAAACCTGCTTGAAGGTGTCAGTGGCATA
AGTGAAATAGAAGCTTTTGATTGTTCTCAGTATCCAACAAGAATTGCTGGAGAGATCAAG
TCTTTCTCAACTGATGGCTGGATTGTACCCAAACTTTCTAAAAGAATGGACAAGTTCATG
CTTTACATGCTAACGGCTGGTAAGAAAGCACTCTCAGATGGTGGAATTACTGAAGACATG
ATGAATGAATTGGATAAAAGAAGATGTGGAGTTTTAATTGGCTCTGCTATGGGTGGGATG
AAGGTTTTTAATGATGCAATAGAGGCTCTAAGGGTTTCCTATAGGAAGATGAATCCTTTT
TGTGTCCCATTTGCAACTACAAACATGGGTTCTGCCATGCTTGCCATGGACCTGGGATGG
ATGGGTCCAAATTATTCAATTTCAACAGCATGTGCAACAAGCAACTTCTGCATATTGAAT
GCCGCTAACCACATCATTAGAGGTGAAGCTGACTTGATGCTGTGCGGTGGATCAGATGCA
GCAATTATACCAATTGGATTGGGAGGATTTGTTGCTTGCAGAGCACTTTCACAGAGAAAT
ACCGACCCTTCAAGAGCTTCTCGGCCTTGGGATAGTAATCGCGATGGATTTGTCATGGGT
GAAGGAGCTGGTGTCCTGCTTCTGGAAGAACTTGAGCATGCCAAGCAAAGAGGTGCAACA
ATCTATGCTGAATTTCTAGGTGGAAGTTTTACTTGTGATGCTTATCACATGACAGAGCCT
CATCCTAAAGGAACTGGAGTCATCCTATGTGTAGAGAAGGCATTAGCTCAGTCAGGGGTA
TCCAAGGAAGATGTGAACTACATTAATGCGCATGCAACATCCACACCAGCAGGAGATCTT
AAGGAGTATCAAGCTCTTGTTCATTGTTTTGGCCAGAATCCAGAGTTGCGAGTTAACTCC
ACAAAATCTATGATTGGTCACCTGCTTGGAGCTGCTGGTGCTGTTGAAGCTGTGGCAACT
ATTCAGGCAATTCGAACTGGTTGGGTTCATCCAAATATTAATCTTGAAAACCCAGATGAA
GGCGTGGATACAAATATACTTGTTGGTCCCAAAAAGGAACGACTGGATATTAAGGTGGCA
TTATCTAATTCATTTGGATTTGGTGGCCACAACTCATCAATCTTATTTGCTCCTTACAAG
TAG