Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035342
CDS Infomation

pacid=37431635 polypeptide=PGSC0003DMP400024036 locus=PGSC0003DMG400013578 ID=PGSC0003DMT400035342.v4.03 annot-version=v4.03
Sequence

ATGCTCTCTCGTTTTATCTCCAAATCCTTACATCTCCGACTGTTCATCCTACTTTCCCCC
AAAACCCATGTCTTAAACCCTAAACCCATTTCCCCTAAACCCTCATTTCCACATTTCTTA
CCCAACAACTCCTGTTTCTTCTCCACAGGTAACAACAACGGCAAAGATTCGGACCATGAG
GGAATAGAAAGCCAAGTTCTTGATGATGGGTCTTGGGCAAAAGAACAAGGGTATAAACCT
TGGAGTTTTGATGTAGAGGGGGAAGAAGAACGACTGTTTGATGTTGGAGAAGAGGTTAGG
GTAGGAGCTGAAATGAAGGGGTTTAAAGTTGAGAAAAAGTTTCTTGAATTGGAAGAGAAA
GCTCTTTATGAGGTTCTTAAAGGTTCTTGTACGGATGAATTGACAATCAAAAAGAGTACA
AAGCCCTCGGCAAGTGTGTATTCAGAAGAAATTTTGGAAATAATTGAGATAATCAAGGGT
GGTGGGGAGGATTTGAGGCAACAGTTAATTTTGGTGGCTTCAAAACTATCATTCAAGTGC
GTCATAGGGATTTTTGACCTTTTGAATGAACAAAGAATATCTGGATTGAATTTCTTTAAT
TGGCTTCGGGACTCACATCCTGAATTTCACTGCAGTGCTTATGTCAATAGTCTGATTATT
TGTAATTGTGGATGGTTAGATGACTATAAAACAATGTTCTCTTTGTTGGAGGAGTTTAAG
GCTGAACAAACTTGTTTAACTGACAAGGCTTTTGGGTTCTTAACTGTATTTGGATCTTGT
AAGGATTCATTGATGAATTCGACTAAGAAAGTGGTTGATATGCTAAATGAGGTTGGAGGA
TCCTGCTGTGGTTCTGGTGTTCACGGATTAATCGAGATGTATTGTTGTTTGGACTTGTTC
GAAATGGCAACATTTGTAATAGAGATCACTGAAAGAACAGCTTCTCGCTACAATATTTTG
ATCCGTAAAAGGTGTCGGGCTGGCCAAATTGAAAAAGCACGAGCAATTATCAAAGAGATG
TCTGAATTTGGCTGTTCTCCTAATACCAAGTCATATAACTACCTGCTTGGTTCATTGTGT
AAGAATGATAAGCTGGAATATGTGCGTATTGTGCTCGAAGAAATGAGAAATAAGGGTCTC
AATCCAGATGCAATTACTTTTGAAACTTTAGTATATCATTCATCTAGTCGTGGTCAGGTT
GAGTTTGCCTCTGAATTTATGAATTTGATGATAAATGTGAATGTGGAACCACGTTCTACT
ACTCATGCTGCATTTCTTAAAGTTTTGCTTGAAGCAGGAGAGCGTGAGAAAGCATATAAG
TATGTGATTGACATGAGTGCCAAGTATAACCACTGTGGAAATACACTATACAGCTTGCTT
GTGAGGCTTAATCAGAAGAAAGGAGACATTATGGCTGCTCAAAACATTCTCAGTGAAATG
ATTGACAAGGGTCTCAAGCCGGACTTTGGAATTTTCATCAAAATTGTAAAGCAGCTCGGG
AAGACTAGAAAGAAAAGTTTAGCTCGAGATCTTAGGATGAAATACTCGGTTTTCTATTGT
AGTACAAAAGCTAACAATTCTTTATCCAATTCGTTTATCCCATGCCAAGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400024036
PEP Infomation

pacid=37431635 transcript=PGSC0003DMT400035342 locus=PGSC0003DMG400013578 ID=PGSC0003DMT400035342.v4.03 annot-version=v4.03
Sequence

MLSRFISKSLHLRLFILLSPKTHVLNPKPISPKPSFPHFLPNNSCFFSTGNNNGKDSDHE
GIESQVLDDGSWAKEQGYKPWSFDVEGEEERLFDVGEEVRVGAEMKGFKVEKKFLELEEK
ALYEVLKGSCTDELTIKKSTKPSASVYSEEILEIIEIIKGGGEDLRQQLILVASKLSFKC
VIGIFDLLNEQRISGLNFFNWLRDSHPEFHCSAYVNSLIICNCGWLDDYKTMFSLLEEFK
AEQTCLTDKAFGFLTVFGSCKDSLMNSTKKVVDMLNEVGGSCCGSGVHGLIEMYCCLDLF
EMATFVIEITERTASRYNILIRKRCRAGQIEKARAIIKEMSEFGCSPNTKSYNYLLGSLC
KNDKLEYVRIVLEEMRNKGLNPDAITFETLVYHSSSRGQVEFASEFMNLMINVNVEPRST
THAAFLKVLLEAGEREKAYKYVIDMSAKYNHCGNTLYSLLVRLNQKKGDIMAAQNILSEM
IDKGLKPDFGIFIKIVKQLGKTRKKSLARDLRMKYSVFYCSTKANNSLSNSFIPCQG*

Transcript Sequence

Transcript ID

PGSC0003DMT400035342
Transcript Infomation

pacid=37431635 locus=PGSC0003DMG400013578 ID=PGSC0003DMT400035342.v4.03 annot-version=v4.03
Sequence

ATGCTCTCTCGTTTTATCTCCAAATCCTTACATCTCCGACTGTTCATCCTACTTTCCCCC
AAAACCCATGTCTTAAACCCTAAACCCATTTCCCCTAAACCCTCATTTCCACATTTCTTA
CCCAACAACTCCTGTTTCTTCTCCACAGGTAACAACAACGGCAAAGATTCGGACCATGAG
GGAATAGAAAGCCAAGTTCTTGATGATGGGTCTTGGGCAAAAGAACAAGGGTATAAACCT
TGGAGTTTTGATGTAGAGGGGGAAGAAGAACGACTGTTTGATGTTGGAGAAGAGGTTAGG
GTAGGAGCTGAAATGAAGGGGTTTAAAGTTGAGAAAAAGTTTCTTGAATTGGAAGAGAAA
GCTCTTTATGAGGTTCTTAAAGGTTCTTGTACGGATGAATTGACAATCAAAAAGAGTACA
AAGCCCTCGGCAAGTGTGTATTCAGAAGAAATTTTGGAAATAATTGAGATAATCAAGGGT
GGTGGGGAGGATTTGAGGCAACAGTTAATTTTGGTGGCTTCAAAACTATCATTCAAGTGC
GTCATAGGGATTTTTGACCTTTTGAATGAACAAAGAATATCTGGATTGAATTTCTTTAAT
TGGCTTCGGGACTCACATCCTGAATTTCACTGCAGTGCTTATGTCAATAGTCTGATTATT
TGTAATTGTGGATGGTTAGATGACTATAAAACAATGTTCTCTTTGTTGGAGGAGTTTAAG
GCTGAACAAACTTGTTTAACTGACAAGGCTTTTGGGTTCTTAACTGTATTTGGATCTTGT
AAGGATTCATTGATGAATTCGACTAAGAAAGTGGTTGATATGCTAAATGAGGTTGGAGGA
TCCTGCTGTGGTTCTGGTGTTCACGGATTAATCGAGATGTATTGTTGTTTGGACTTGTTC
GAAATGGCAACATTTGTAATAGAGATCACTGAAAGAACAGCTTCTCGCTACAATATTTTG
ATCCGTAAAAGGTGTCGGGCTGGCCAAATTGAAAAAGCACGAGCAATTATCAAAGAGATG
TCTGAATTTGGCTGTTCTCCTAATACCAAGTCATATAACTACCTGCTTGGTTCATTGTGT
AAGAATGATAAGCTGGAATATGTGCGTATTGTGCTCGAAGAAATGAGAAATAAGGGTCTC
AATCCAGATGCAATTACTTTTGAAACTTTAGTATATCATTCATCTAGTCGTGGTCAGGTT
GAGTTTGCCTCTGAATTTATGAATTTGATGATAAATGTGAATGTGGAACCACGTTCTACT
ACTCATGCTGCATTTCTTAAAGTTTTGCTTGAAGCAGGAGAGCGTGAGAAAGCATATAAG
TATGTGATTGACATGAGTGCCAAGTATAACCACTGTGGAAATACACTATACAGCTTGCTT
GTGAGGCTTAATCAGAAGAAAGGAGACATTATGGCTGCTCAAAACATTCTCAGTGAAATG
ATTGACAAGGGTCTCAAGCCGGACTTTGGAATTTTCATCAAAATTGTAAAGCAGCTCGGG
AAGACTAGAAAGAAAAGTTTAGCTCGAGATCTTAGGATGAAATACTCGGTTTTCTATTGT
AGTACAAAAGCTAACAATTCTTTATCCAATTCGTTTATCCCATGCCAAGGTTGA