Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400035290
CDS Infomation

pacid=37434344 polypeptide=PGSC0003DMP400024002 locus=PGSC0003DMG400013562 ID=PGSC0003DMT400035290.v4.03 annot-version=v4.03
Sequence

ATGGCACCGCAACAGCAGCAGGTGGAGGAAGATGAACATGTGTACACACTGGATGAAGCT
CTTACAGCTCTGGGTTTTGGCAAATTCCAGTATTTGGTGTTGGGTTATGCGGGTCTTGGA
TCAATGGTGGATGCTGTTGAAGTTATGATTCTTTCTTTTATTGGACCAGCTGTTAAGTCT
CAATGGGGGCTTTCTTCTACACAAGAAACTCTTATTACTACTGTTGTGTTTGCTGGCATG
CTTATTGGAGCTTACTTTTGGGGCATTCTTGCTGACAACTATGGAAGAAGGAAAAGTCTT
CTGATTGTGGCAATAGTGACAACCGTATCTGCATTTCTGAGTTCCTTTTCTCCAAACTAT
ATATCACTGCTCATTCTTCGTATGCTGGTTGGAACTGGTCTGGGTGGTGGGCCTGTATAT
GGATCTTGGTTTCTAGAATTCGTGCCTTCTCGAAATAGGGGCATGTGGATGGTTATCTAT
TCAACCTTTTGGACAATTGGAACAATACTTGAGGCTTTATTGGCTATGATTATCATGCCA
AGACTAGGTTGGAGGTGGTTATTGGCTTTATCGTCTATACCATCATTTGCAGCACTTCTC
TTGTACATTTTTACAGTAGAGTCTCCTAGATATCTATGTGCCGAAGGCAGAATAAGTGAT
GCACATGATATTTTGAGGAAAATAGCTGTTGTCAATCAGACAAAACTCCCCCCTGGGATG
CTTGTTTCTGATCAAGTGACACAGCTGGATGAGGAAGAGGAATTGCTTAGGCCGAGAGCA
AACAAAATCTTCAATTTTAAGACAGGATTGTCTTCATCCCTGATGCTTTTATCCCCACAA
TTACTACGAATTACCCTCCTCATGTGGGTGGTTTATTTTGGAAATTCATTTGCCTATTAT
GGCATTATATTGCTGACATCACAGTTCAGCGCTGGGGAAAGTCAATGCTTCTCAGTTGCT
TTGCATGTGAAAAATGATACAAGCCTCTATACAGACGCGTTCATCACTAGCCTTGCTGAG
CTTCCTGGGCTTCTTATTTCAGCTGTAGTGGTGGAGAAAGTTGGTCGGAAATATTCAATG
GCCCTGATGTATATCATGGGGTCCCTTTTCCTTTTTCCACTTGTTGTACCTCAGAATGAG
GCATTAACAACAGCATTGCTATTTGGAGCTCGTATCTGGTTCATAGGGACCTTCACCCTT
GCTGGTGTTTATTGTCCAGAGATTTATCCAACCTCAGTGAGATCAACAGGTTGTGGAGTT
GCAAGTGCTGTGGGGAGAATTGCAGGGATGGTCTCTCCTATAGTTGCAGTGCAATTGGTT
AGAGGTTGCCACCAGATGGCTGCAATCATTTTATTTGAAGTGGTTGTAATTTTATCAGCA
ATTAGTGTTCTGCTCTTTCCAGTTGAGACCAAGGGGCGTGAACTTGTTGATCATGTCTCT
CTGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400024002
PEP Infomation

pacid=37434344 transcript=PGSC0003DMT400035290 locus=PGSC0003DMG400013562 ID=PGSC0003DMT400035290.v4.03 annot-version=v4.03
Sequence

MAPQQQQVEEDEHVYTLDEALTALGFGKFQYLVLGYAGLGSMVDAVEVMILSFIGPAVKS
QWGLSSTQETLITTVVFAGMLIGAYFWGILADNYGRRKSLLIVAIVTTVSAFLSSFSPNY
ISLLILRMLVGTGLGGGPVYGSWFLEFVPSRNRGMWMVIYSTFWTIGTILEALLAMIIMP
RLGWRWLLALSSIPSFAALLLYIFTVESPRYLCAEGRISDAHDILRKIAVVNQTKLPPGM
LVSDQVTQLDEEEELLRPRANKIFNFKTGLSSSLMLLSPQLLRITLLMWVVYFGNSFAYY
GIILLTSQFSAGESQCFSVALHVKNDTSLYTDAFITSLAELPGLLISAVVVEKVGRKYSM
ALMYIMGSLFLFPLVVPQNEALTTALLFGARIWFIGTFTLAGVYCPEIYPTSVRSTGCGV
ASAVGRIAGMVSPIVAVQLVRGCHQMAAIILFEVVVILSAISVLLFPVETKGRELVDHVS
L*

Transcript Sequence

Transcript ID

PGSC0003DMT400035290
Transcript Infomation

pacid=37434344 locus=PGSC0003DMG400013562 ID=PGSC0003DMT400035290.v4.03 annot-version=v4.03
Sequence

ATGGCACCGCAACAGCAGCAGGTGGAGGAAGATGAACATGTGTACACACTGGATGAAGCT
CTTACAGCTCTGGGTTTTGGCAAATTCCAGTATTTGGTGTTGGGTTATGCGGGTCTTGGA
TCAATGGTGGATGCTGTTGAAGTTATGATTCTTTCTTTTATTGGACCAGCTGTTAAGTCT
CAATGGGGGCTTTCTTCTACACAAGAAACTCTTATTACTACTGTTGTGTTTGCTGGCATG
CTTATTGGAGCTTACTTTTGGGGCATTCTTGCTGACAACTATGGAAGAAGGAAAAGTCTT
CTGATTGTGGCAATAGTGACAACCGTATCTGCATTTCTGAGTTCCTTTTCTCCAAACTAT
ATATCACTGCTCATTCTTCGTATGCTGGTTGGAACTGGTCTGGGTGGTGGGCCTGTATAT
GGATCTTGGTTTCTAGAATTCGTGCCTTCTCGAAATAGGGGCATGTGGATGGTTATCTAT
TCAACCTTTTGGACAATTGGAACAATACTTGAGGCTTTATTGGCTATGATTATCATGCCA
AGACTAGGTTGGAGGTGGTTATTGGCTTTATCGTCTATACCATCATTTGCAGCACTTCTC
TTGTACATTTTTACAGTAGAGTCTCCTAGATATCTATGTGCCGAAGGCAGAATAAGTGAT
GCACATGATATTTTGAGGAAAATAGCTGTTGTCAATCAGACAAAACTCCCCCCTGGGATG
CTTGTTTCTGATCAAGTGACACAGCTGGATGAGGAAGAGGAATTGCTTAGGCCGAGAGCA
AACAAAATCTTCAATTTTAAGACAGGATTGTCTTCATCCCTGATGCTTTTATCCCCACAA
TTACTACGAATTACCCTCCTCATGTGGGTGGTTTATTTTGGAAATTCATTTGCCTATTAT
GGCATTATATTGCTGACATCACAGTTCAGCGCTGGGGAAAGTCAATGCTTCTCAGTTGCT
TTGCATGTGAAAAATGATACAAGCCTCTATACAGACGCGTTCATCACTAGCCTTGCTGAG
CTTCCTGGGCTTCTTATTTCAGCTGTAGTGGTGGAGAAAGTTGGTCGGAAATATTCAATG
GCCCTGATGTATATCATGGGGTCCCTTTTCCTTTTTCCACTTGTTGTACCTCAGAATGAG
GCATTAACAACAGCATTGCTATTTGGAGCTCGTATCTGGTTCATAGGGACCTTCACCCTT
GCTGGTGTTTATTGTCCAGAGATTTATCCAACCTCAGTGAGATCAACAGGTTGTGGAGTT
GCAAGTGCTGTGGGGAGAATTGCAGGGATGGTCTCTCCTATAGTTGCAGTGCAATTGGTT
AGAGGTTGCCACCAGATGGCTGCAATCATTTTATTTGAAGTGGTTGTAATTTTATCAGCA
ATTAGTGTTCTGCTCTTTCCAGTTGAGACCAAGGGGCGTGAACTTGTTGATCATGTCTCT
CTGTAG